RNA–Protein interactions for RNA: ENST00000497390.5

PCBP4-216, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-216ENST00000497390 AKNAQ7Z591 1439 aa22.83■■□□□ 1.25
PCBP4-216ENST00000497390 IRX6P78412 446 aaPredicted RBP22.82■■□□□ 1.24
PCBP4-216ENST00000497390 EIF4G2P78344 907 aaKnown RBP eCLIP22.82■■□□□ 1.24
PCBP4-216ENST00000497390 PRG4Q92954 1404 aaPredicted RBP22.8■■□□□ 1.24
PCBP4-216ENST00000497390 ANKRD30BQ9BXX2 1392 aa22.79■■□□□ 1.24
PCBP4-216ENST00000497390 NEFLP07196 543 aa22.79■■□□□ 1.24
PCBP4-216ENST00000497390 KIAA0586Q9BVV6 1533 aa22.78■■□□□ 1.24
PCBP4-216ENST00000497390 DNMT1P26358 1616 aaKnown RBP22.78■■□□□ 1.24
PCBP4-216ENST00000497390 SLC4A1APQ9BWU0 796 aaKnown RBP22.77■■□□□ 1.24
PCBP4-216ENST00000497390 IFT140Q96RY7 1462 aa22.77■■□□□ 1.23
PCBP4-216ENST00000497390 RAPGEF6Q8TEU7 1601 aa22.76■■□□□ 1.23
PCBP4-216ENST00000497390 EIF4G3O43432 1585 aaKnown RBP22.75■■□□□ 1.23
PCBP4-216ENST00000497390 GRIN2AQ12879 1464 aa22.75■■□□□ 1.23
PCBP4-216ENST00000497390 PLB1Q6P1J6 1458 aa22.75■■□□□ 1.23
PCBP4-216ENST00000497390 ZNF777Q9ULD5 760 aaPredicted RBP22.75■■□□□ 1.23
PCBP4-216ENST00000497390 TEX14Q8IWB6 1497 aa22.74■■□□□ 1.23
PCBP4-216ENST00000497390 FBLN2P98095 1184 aa22.73■■□□□ 1.23
PCBP4-216ENST00000497390 RPRD2Q5VT52 1461 aaKnown RBP22.73■■□□□ 1.23
PCBP4-216ENST00000497390 CNGB1Q14028 1251 aaPredicted RBP22.72■■□□□ 1.23
PCBP4-216ENST00000497390 CNTLNQ9NXG0 1405 aa22.72■■□□□ 1.23
PCBP4-216ENST00000497390 CCDC7Q96M83 1385 aa22.71■■□□□ 1.23
PCBP4-216ENST00000497390 KIF14Q15058 1648 aa22.71■■□□□ 1.23
PCBP4-216ENST00000497390 ROCK1Q13464 1354 aa22.7■■□□□ 1.23
PCBP4-216ENST00000497390 NCOA1Q15788 1441 aa22.7■■□□□ 1.22
PCBP4-216ENST00000497390 FAM9BQ8IZU0 186 aa22.68■■□□□ 1.22
PCBP4-216ENST00000497390 CFDP1Q9UEE9 299 aaPredicted RBP22.68■■□□□ 1.22
PCBP4-216ENST00000497390 PRKRIP1Q9H875 184 aaPredicted RBP22.67■■□□□ 1.22
PCBP4-216ENST00000497390 PZPP20742 1482 aa22.67■■□□□ 1.22
PCBP4-216ENST00000497390 CAMSAP2Q08AD1 1489 aa22.67■■□□□ 1.22
PCBP4-216ENST00000497390 CEP170Q5SW79 1584 aa22.67■■□□□ 1.22
PCBP4-216ENST00000497390 KIF7Q2M1P5 1343 aa22.66■■□□□ 1.22
PCBP4-216ENST00000497390 ZNF326Q5BKZ1 582 aaKnown RBP22.65■■□□□ 1.22
PCBP4-216ENST00000497390 CHMP7Q8WUX9 453 aaPredicted RBP22.65■■□□□ 1.22
PCBP4-216ENST00000497390 MYT1Q01538 1121 aa22.64■■□□□ 1.21
PCBP4-216ENST00000497390 TROQ12816 1431 aaPredicted RBP22.63■■□□□ 1.21
PCBP4-216ENST00000497390 SPATA31E1Q6ZUB1 1445 aa22.63■■□□□ 1.21
PCBP4-216ENST00000497390 GPATCH8Q9UKJ3 1502 aaKnown RBP22.63■■□□□ 1.21
PCBP4-216ENST00000497390 RBM19Q9Y4C8 960 aaKnown RBP22.63■■□□□ 1.21
PCBP4-216ENST00000497390 CDK11AQ9UQ88 783 aaPredicted RBP22.62■■□□□ 1.21
PCBP4-216ENST00000497390 SENP3-EIF4A1A0A087X0R7 540 aa22.6■■□□□ 1.21
PCBP4-216ENST00000497390 MRS2Q9HD23 443 aa22.6■■□□□ 1.21
PCBP4-216ENST00000497390 POLR3GLQ9BT43 218 aa22.59■■□□□ 1.21
PCBP4-216ENST00000497390 PKD2Q13563 968 aa22.57■■□□□ 1.2
PCBP4-216ENST00000497390 ERCC6Q03468 1493 aa22.56■■□□□ 1.2
PCBP4-216ENST00000497390 JPH4Q96JJ6 628 aa22.56■■□□□ 1.2
PCBP4-216ENST00000497390 BCORL1Q5H9F3 1711 aa22.54■■□□□ 1.2
PCBP4-216ENST00000497390 ADGBQ8N7X0 1667 aa22.52■■□□□ 1.2
PCBP4-216ENST00000497390 ITSN2Q9NZM3 1697 aa22.52■■□□□ 1.2
PCBP4-216ENST00000497390 SYNJ2O15056 1496 aa22.52■■□□□ 1.19
PCBP4-216ENST00000497390 CROCC2H7BZ55 1655 aa22.51■■□□□ 1.19
PCBP4-216ENST00000497390 ANP32EQ9BTT0 268 aa22.51■■□□□ 1.19
PCBP4-216ENST00000497390 MAGI1Q96QZ7 1491 aaPredicted RBP22.5■■□□□ 1.19
PCBP4-216ENST00000497390 POLR1AO95602 1720 aaPredicted RBP22.5■■□□□ 1.19
PCBP4-216ENST00000497390 MBD5Q9P267 1494 aa22.5■■□□□ 1.19
PCBP4-216ENST00000497390 KIAA1107Q9UPP5 1409 aa22.5■■□□□ 1.19
PCBP4-216ENST00000497390 CDC42BPAQ5VT25 1732 aa22.48■■□□□ 1.19
PCBP4-216ENST00000497390 USP47Q96K76 1375 aa22.48■■□□□ 1.19
PCBP4-216ENST00000497390 ADCY10Q96PN6 1610 aa22.47■■□□□ 1.19
PCBP4-216ENST00000497390 ANKRD50Q9ULJ7 1429 aa22.47■■□□□ 1.19
PCBP4-216ENST00000497390 ADGRL2O95490 1459 aa22.46■■□□□ 1.19
PCBP4-216ENST00000497390 DHX29Q7Z478 1369 aaKnown RBP22.46■■□□□ 1.19
PCBP4-216ENST00000497390 ANKRD30AQ9BXX3 1397 aa22.44■■□□□ 1.18
PCBP4-216ENST00000497390 HNRNPMP52272 730 aaKnown RBP eCLIP22.44■■□□□ 1.18
PCBP4-216ENST00000497390 KDM2AQ9Y2K7 1162 aa22.43■■□□□ 1.18
PCBP4-216ENST00000497390 ATP10BO94823 1461 aa22.43■■□□□ 1.18
PCBP4-216ENST00000497390 NUP155O75694 1391 aa22.43■■□□□ 1.18
PCBP4-216ENST00000497390 NUP160Q12769 1436 aa22.43■■□□□ 1.18
PCBP4-216ENST00000497390 PLEKHD1A6NEE1 506 aa22.42■■□□□ 1.18
PCBP4-216ENST00000497390 CARMIL2Q6F5E8 1435 aa22.42■■□□□ 1.18
PCBP4-216ENST00000497390 ZBED9Q6R2W3 1325 aa22.41■■□□□ 1.18
PCBP4-216ENST00000497390 MSH5O43196 834 aa22.41■■□□□ 1.18
PCBP4-216ENST00000497390 ABCC10Q5T3U5 1492 aa22.41■■□□□ 1.18
PCBP4-216ENST00000497390 B4GALNT3Q6L9W6 998 aa22.4■■□□□ 1.18
PCBP4-216ENST00000497390 C9orf84Q5VXU9 1444 aa22.4■■□□□ 1.18
PCBP4-216ENST00000497390 KDM5CP41229 1560 aa22.4■■□□□ 1.18
PCBP4-216ENST00000497390 ABCA8O94911 1581 aa22.38■■□□□ 1.17
PCBP4-216ENST00000497390 CARD11Q9BXL7 1154 aa22.33■■□□□ 1.17
PCBP4-216ENST00000497390 ST20-MTHFSA0A0A6YYL1 179 aa22.32■■□□□ 1.16
PCBP4-216ENST00000497390 DCAF11Q8TEB1 546 aa22.32■■□□□ 1.16
PCBP4-216ENST00000497390 KIF15Q9NS87 1388 aa22.31■■□□□ 1.16
PCBP4-216ENST00000497390 PPP4R2Q9NY27 417 aa22.31■■□□□ 1.16
PCBP4-216ENST00000497390 TSPY4P0CV99 314 aa22.3■■□□□ 1.16
PCBP4-216ENST00000497390 TSPY10P0CW01 314 aa22.3■■□□□ 1.16
PCBP4-216ENST00000497390 RALGAPBQ86X10 1494 aa22.27■■□□□ 1.16
PCBP4-216ENST00000497390 UHRF1BP1Q6BDS2 1440 aa22.26■■□□□ 1.15
PCBP4-216ENST00000497390 SHANK2Q9UPX8 1470 aa22.26■■□□□ 1.15
PCBP4-216ENST00000497390 CDC42BPBQ9Y5S2 1711 aa22.25■■□□□ 1.15
PCBP4-216ENST00000497390 SAMD9LQ8IVG5 1584 aa22.25■■□□□ 1.15
PCBP4-216ENST00000497390 RGL3Q3MIN7 710 aa22.23■■□□□ 1.15
PCBP4-216ENST00000497390 PNISRQ8TF01 805 aaKnown RBP22.22■■□□□ 1.15
PCBP4-216ENST00000497390 PTPRGP23470 1445 aa22.21■■□□□ 1.15
PCBP4-216ENST00000497390 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.21■■□□□ 1.15
PCBP4-216ENST00000497390 NBPF1Q3BBV0 1214 aa22.2■■□□□ 1.14
PCBP4-216ENST00000497390 KDM5DQ9BY66 1539 aa22.2■■□□□ 1.14
PCBP4-216ENST00000497390 TMC1Q8TDI8 760 aa22.19■■□□□ 1.14
PCBP4-216ENST00000497390 FAM135AQ9P2D6 1515 aa22.19■■□□□ 1.14
PCBP4-216ENST00000497390 SMG6Q86US8 1419 aaKnown RBP22.18■■□□□ 1.14
PCBP4-216ENST00000497390 ERICH6BQ5W0A0 696 aa22.18■■□□□ 1.14
PCBP4-216ENST00000497390 ROCK2O75116 1388 aaKnown RBP22.17■■□□□ 1.14
PCBP4-216ENST00000497390 ARHGEF12Q9NZN5 1544 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms