RNA–Protein interactions for RNA: ENST00000497073.1

TMC1-206, Transcript of transmembrane channel like 1, humanhuman

TSL 5

Gene TMC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-206ENST00000497073 CEP170Q5SW79 1584 aa12.53□□□□□ -0.4
TMC1-206ENST00000497073 ATN1P54259 1190 aaPredicted RBP12.52□□□□□ -0.41
TMC1-206ENST00000497073 PRG4Q92954 1404 aaPredicted RBP12.51□□□□□ -0.41
TMC1-206ENST00000497073 CUL7Q14999 1698 aa12.51□□□□□ -0.41
TMC1-206ENST00000497073 KIAA0586Q9BVV6 1533 aa12.5□□□□□ -0.41
TMC1-206ENST00000497073 NPM1P06748 294 aaKnown RBP eCLIP12.47□□□□□ -0.41
TMC1-206ENST00000497073 RAPGEF2Q9Y4G8 1499 aa12.45□□□□□ -0.42
TMC1-206ENST00000497073 SHROOM2Q13796 1616 aa12.44□□□□□ -0.42
TMC1-206ENST00000497073 ST18O60284 1047 aa12.44□□□□□ -0.42
TMC1-206ENST00000497073 CARMIL2Q6F5E8 1435 aa12.44□□□□□ -0.42
TMC1-206ENST00000497073 RUSC2Q8N2Y8 1516 aa12.42□□□□□ -0.42
TMC1-206ENST00000497073 ERCC6L2Q5T890 1561 aa12.41□□□□□ -0.42
TMC1-206ENST00000497073 FAM9AQ8IZU1 332 aaPredicted RBP12.41□□□□□ -0.42
TMC1-206ENST00000497073 STAG3Q9UJ98 1225 aa12.4□□□□□ -0.42
TMC1-206ENST00000497073 MNX1P50219 401 aaPredicted RBP12.39□□□□□ -0.43
TMC1-206ENST00000497073 CSRNP3Q8WYN3 585 aa12.39□□□□□ -0.43
TMC1-206ENST00000497073 PTPRGP23470 1445 aa12.38□□□□□ -0.43
TMC1-206ENST00000497073 TNIKQ9UKE5 1360 aa12.37□□□□□ -0.43
TMC1-206ENST00000497073 EEA1Q15075 1411 aa12.36□□□□□ -0.43
TMC1-206ENST00000497073 TTBK1Q5TCY1 1321 aaPredicted RBP12.36□□□□□ -0.43
TMC1-206ENST00000497073 IQGAP2Q13576 1575 aa12.35□□□□□ -0.43
TMC1-206ENST00000497073 BMP2KQ9NSY1 1161 aaPredicted RBP12.33□□□□□ -0.44
TMC1-206ENST00000497073 COLQQ9Y215 455 aaPredicted RBP12.33□□□□□ -0.44
TMC1-206ENST00000497073 PRXQ9BXM0 1461 aa12.33□□□□□ -0.44
TMC1-206ENST00000497073 GOLGA3Q08378 1498 aa12.29□□□□□ -0.44
TMC1-206ENST00000497073 UGGT2Q9NYU1 1516 aa12.29□□□□□ -0.44
TMC1-206ENST00000497073 FAM69CQ0P6D2 419 aa12.29□□□□□ -0.44
TMC1-206ENST00000497073 TRPC6Q9Y210 931 aa12.28□□□□□ -0.44
TMC1-206ENST00000497073 UACAQ9BZF9 1416 aa12.27□□□□□ -0.45
TMC1-206ENST00000497073 SLAIN1Q8ND83 568 aa12.26□□□□□ -0.45
TMC1-206ENST00000497073 DISP1Q96F81 1524 aa12.26□□□□□ -0.45
TMC1-206ENST00000497073 MAPKBP1O60336 1514 aa12.24□□□□□ -0.45
TMC1-206ENST00000497073 UHRF1BP1LA0JNW5 1464 aa12.23□□□□□ -0.45
TMC1-206ENST00000497073 ABCC10Q5T3U5 1492 aa12.23□□□□□ -0.45
TMC1-206ENST00000497073 SEC24BO95487 1268 aa12.23□□□□□ -0.45
TMC1-206ENST00000497073 ADCY10Q96PN6 1610 aa12.22□□□□□ -0.45
TMC1-206ENST00000497073 ABCC2Q92887 1545 aa12.22□□□□□ -0.45
TMC1-206ENST00000497073 CCDC61Q9Y6R9 512 aa12.21□□□□□ -0.45
TMC1-206ENST00000497073 PLB1Q6P1J6 1458 aa12.21□□□□□ -0.46
TMC1-206ENST00000497073 KIAA0556O60303 1618 aa12.2□□□□□ -0.46
TMC1-206ENST00000497073 UBTFP17480 764 aaKnown RBP12.2□□□□□ -0.46
TMC1-206ENST00000497073 KIF12Q96FN5 646 aa12.2□□□□□ -0.46
TMC1-206ENST00000497073 TIE1P35590 1138 aa12.19□□□□□ -0.46
TMC1-206ENST00000497073 P3H3Q8IVL6 736 aa12.19□□□□□ -0.46
TMC1-206ENST00000497073 TSPYL2Q9H2G4 693 aaPredicted RBP12.19□□□□□ -0.46
TMC1-206ENST00000497073 CTTNBP2Q8WZ74 1663 aa12.19□□□□□ -0.46
TMC1-206ENST00000497073 RANGAP1P46060 587 aaPredicted RBP12.18□□□□□ -0.46
TMC1-206ENST00000497073 TMEM121BQ9BXQ6 578 aaPredicted RBP12.18□□□□□ -0.46
TMC1-206ENST00000497073 ASXL2Q76L83 1435 aa12.17□□□□□ -0.46
TMC1-206ENST00000497073 KDM5BQ9UGL1 1544 aa12.16□□□□□ -0.46
TMC1-206ENST00000497073 TTLL13PA6NNM8 815 aa12.12□□□□□ -0.47
TMC1-206ENST00000497073 EHMT2Q96KQ7 1210 aa12.12□□□□□ -0.47
TMC1-206ENST00000497073 DIP2BQ9P265 1576 aa12.12□□□□□ -0.47
TMC1-206ENST00000497073 KIF21BO75037 1637 aa12.11□□□□□ -0.47
TMC1-206ENST00000497073 MARVELD3Q96A59 401 aa12.11□□□□□ -0.47
TMC1-206ENST00000497073 KCNH8Q96L42 1107 aa12.11□□□□□ -0.47
TMC1-206ENST00000497073 ABCA8O94911 1581 aa12.09□□□□□ -0.47
TMC1-206ENST00000497073 WDR7Q9Y4E6 1490 aa12.08□□□□□ -0.47
TMC1-206ENST00000497073 IER5LQ5T953 404 aa12.08□□□□□ -0.48
TMC1-206ENST00000497073 GLI2P10070 1586 aa12.08□□□□□ -0.48
TMC1-206ENST00000497073 EPRSP07814 1512 aaKnown RBP12.07□□□□□ -0.48
TMC1-206ENST00000497073 KIF13AQ9H1H9 1805 aa12.07□□□□□ -0.48
TMC1-206ENST00000497073 ARID3CA6NKF2 412 aa12.07□□□□□ -0.48
TMC1-206ENST00000497073 MAP3K13O43283 966 aa12.07□□□□□ -0.48
TMC1-206ENST00000497073 EFCAB5A4FU69 1503 aa12.06□□□□□ -0.48
TMC1-206ENST00000497073 SAMD9Q5K651 1589 aa12.06□□□□□ -0.48
TMC1-206ENST00000497073 PLEKHD1A6NEE1 506 aa12.06□□□□□ -0.48
TMC1-206ENST00000497073 ZCCHC11Q5TAX3 1644 aaKnown RBP12.06□□□□□ -0.48
TMC1-206ENST00000497073 TEX14Q8IWB6 1497 aa12.06□□□□□ -0.48
TMC1-206ENST00000497073 FHOD3Q2V2M9 1422 aa12.04□□□□□ -0.48
TMC1-206ENST00000497073 ATP10BO94823 1461 aa12.04□□□□□ -0.48
TMC1-206ENST00000497073 KRTAP3-3Q9BYR6 98 aa12.04□□□□□ -0.48
TMC1-206ENST00000497073 KRTAP3-2Q9BYR7 98 aa12.04□□□□□ -0.48
TMC1-206ENST00000497073 ATP1B4Q9UN42 357 aaPredicted RBP12.04□□□□□ -0.48
TMC1-206ENST00000497073 CD109Q6YHK3 1445 aa12.03□□□□□ -0.48
TMC1-206ENST00000497073 TRIM35Q9UPQ4 493 aa12.03□□□□□ -0.48
TMC1-206ENST00000497073 FMN1Q68DA7 1419 aa12.03□□□□□ -0.48
TMC1-206ENST00000497073 CDK11AQ9UQ88 783 aaPredicted RBP12.02□□□□□ -0.49
TMC1-206ENST00000497073 KDM6BO15054 1643 aa12.01□□□□□ -0.49
TMC1-206ENST00000497073 RAPGEF6Q8TEU7 1601 aa12□□□□□ -0.49
TMC1-206ENST00000497073 PHLDB1Q86UU1 1377 aa11.98□□□□□ -0.49
TMC1-206ENST00000497073 MAGI3Q5TCQ9 1506 aa11.97□□□□□ -0.49
TMC1-206ENST00000497073 NUP153P49790 1475 aaKnown RBP11.97□□□□□ -0.49
TMC1-206ENST00000497073 SNPHO15079 494 aa11.97□□□□□ -0.49
TMC1-206ENST00000497073 TSPOAP1O95153 1857 aa11.97□□□□□ -0.49
TMC1-206ENST00000497073 MAP3K4Q9Y6R4 1608 aa11.97□□□□□ -0.49
TMC1-206ENST00000497073 ARHGAP35Q9NRY4 1499 aa11.95□□□□□ -0.5
TMC1-206ENST00000497073 POTEB3A0JP26 581 aa11.94□□□□□ -0.5
TMC1-206ENST00000497073 POTEBQ6S5H4 581 aa11.94□□□□□ -0.5
TMC1-206ENST00000497073 CFAP43Q8NDM7 1665 aa11.93□□□□□ -0.5
TMC1-206ENST00000497073 CLIP1P30622 1438 aa11.9□□□□□ -0.5
TMC1-206ENST00000497073 EMP3P54852 163 aa11.9□□□□□ -0.5
TMC1-206ENST00000497073 SPDYE4A6NLX3 237 aa11.89□□□□□ -0.51
TMC1-206ENST00000497073 PPRC1Q5VV67 1664 aaKnown RBP11.89□□□□□ -0.51
TMC1-206ENST00000497073 HECW1Q76N89 1606 aa11.89□□□□□ -0.51
TMC1-206ENST00000497073 NEO1Q92859 1461 aa11.89□□□□□ -0.51
TMC1-206ENST00000497073 COL17A1Q9UMD9 1497 aaPredicted RBP11.89□□□□□ -0.51
TMC1-206ENST00000497073 PLCG2P16885 1265 aa11.88□□□□□ -0.51
TMC1-206ENST00000497073 HS3ST6Q96QI5 342 aa11.88□□□□□ -0.51
TMC1-206ENST00000497073 ABCA9Q8IUA7 1624 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms