RNA–Protein interactions for RNA: ENST00000496686.1

COL15A1-204, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 3

Gene COL15A1, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-204ENST00000496686 CDC42BPAQ5VT25 1732 aa22.47■■□□□ 1.19
COL15A1-204ENST00000496686 ACIN1Q9UKV3 1341 aaKnown RBP22.47■■□□□ 1.19
COL15A1-204ENST00000496686 ABCC5O15440 1437 aa22.47■■□□□ 1.19
COL15A1-204ENST00000496686 PREX2Q70Z35 1606 aa22.42■■□□□ 1.18
COL15A1-204ENST00000496686 MAPKBP1O60336 1514 aa22.41■■□□□ 1.18
COL15A1-204ENST00000496686 ZNF644Q9H582 1327 aaPredicted RBP22.39■■□□□ 1.18
COL15A1-204ENST00000496686 ADGRL2O95490 1459 aa22.39■■□□□ 1.17
COL15A1-204ENST00000496686 SHANK2Q9UPX8 1470 aa22.39■■□□□ 1.17
COL15A1-204ENST00000496686 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.38■■□□□ 1.17
COL15A1-204ENST00000496686 CROCC2H7BZ55 1655 aa22.37■■□□□ 1.17
COL15A1-204ENST00000496686 ARHGEF5Q12774 1597 aa22.37■■□□□ 1.17
COL15A1-204ENST00000496686 TTC37Q6PGP7 1564 aa22.35■■□□□ 1.17
COL15A1-204ENST00000496686 ADGBQ8N7X0 1667 aa22.35■■□□□ 1.17
COL15A1-204ENST00000496686 CDC42BPBQ9Y5S2 1711 aa22.32■■□□□ 1.16
COL15A1-204ENST00000496686 RRP7BPQ9NSQ0 103 aa22.32■■□□□ 1.16
COL15A1-204ENST00000496686 CHIC2Q9UKJ5 165 aa22.32■■□□□ 1.16
COL15A1-204ENST00000496686 PLEKHH2Q8IVE3 1493 aa22.32■■□□□ 1.16
COL15A1-204ENST00000496686 WDR7Q9Y4E6 1490 aa22.31■■□□□ 1.16
COL15A1-204ENST00000496686 MYO5CQ9NQX4 1742 aa22.31■■□□□ 1.16
COL15A1-204ENST00000496686 ARAP3Q8WWN8 1544 aa22.31■■□□□ 1.16
COL15A1-204ENST00000496686 SAMD9LQ8IVG5 1584 aa22.3■■□□□ 1.16
COL15A1-204ENST00000496686 RSPH4AQ5TD94 716 aa22.3■■□□□ 1.16
COL15A1-204ENST00000496686 ZNF777Q9ULD5 760 aaPredicted RBP22.3■■□□□ 1.16
COL15A1-204ENST00000496686 NCOA1Q15788 1441 aa22.29■■□□□ 1.16
COL15A1-204ENST00000496686 MBD5Q9P267 1494 aa22.28■■□□□ 1.16
COL15A1-204ENST00000496686 ARHGAP5Q13017 1502 aa22.28■■□□□ 1.16
COL15A1-204ENST00000496686 PLCH2O75038 1416 aa22.28■■□□□ 1.16
COL15A1-204ENST00000496686 KIAA1107Q9UPP5 1409 aa22.28■■□□□ 1.16
COL15A1-204ENST00000496686 ANKRD30AQ9BXX3 1397 aa22.27■■□□□ 1.16
COL15A1-204ENST00000496686 CCDC141Q6ZP82 1450 aa22.27■■□□□ 1.16
COL15A1-204ENST00000496686 C9orf84Q5VXU9 1444 aa22.25■■□□□ 1.15
COL15A1-204ENST00000496686 TIMELESSQ9UNS1 1208 aa22.25■■□□□ 1.15
COL15A1-204ENST00000496686 KDM6BO15054 1643 aa22.24■■□□□ 1.15
COL15A1-204ENST00000496686 MAST1Q9Y2H9 1570 aa22.23■■□□□ 1.15
COL15A1-204ENST00000496686 KCNH8Q96L42 1107 aa22.21■■□□□ 1.15
COL15A1-204ENST00000496686 TSPY4P0CV99 314 aa22.2■■□□□ 1.14
COL15A1-204ENST00000496686 TSPY10P0CW01 314 aa22.2■■□□□ 1.14
COL15A1-204ENST00000496686 ASXL2Q76L83 1435 aa22.2■■□□□ 1.14
COL15A1-204ENST00000496686 ABCA9Q8IUA7 1624 aa22.2■■□□□ 1.14
COL15A1-204ENST00000496686 EFCAB2Q5VUJ9 269 aa22.19■■□□□ 1.14
COL15A1-204ENST00000496686 SYCP2Q9BX26 1530 aa22.18■■□□□ 1.14
COL15A1-204ENST00000496686 NPM1P06748 294 aaKnown RBP eCLIP22.17■■□□□ 1.14
COL15A1-204ENST00000496686 ABCC1P33527 1531 aa22.16■■□□□ 1.14
COL15A1-204ENST00000496686 HNRNPMP52272 730 aaKnown RBP eCLIP22.15■■□□□ 1.14
COL15A1-204ENST00000496686 ANKRD50Q9ULJ7 1429 aa22.14■■□□□ 1.14
COL15A1-204ENST00000496686 TRIM52Q96A61 297 aa22.13■■□□□ 1.13
COL15A1-204ENST00000496686 DENND4BO75064 1496 aaPredicted RBP22.12■■□□□ 1.13
COL15A1-204ENST00000496686 PLXNC1O60486 1568 aa22.12■■□□□ 1.13
COL15A1-204ENST00000496686 KIF15Q9NS87 1388 aa22.11■■□□□ 1.13
COL15A1-204ENST00000496686 MPHOSPH9Q99550 1183 aa22.1■■□□□ 1.13
COL15A1-204ENST00000496686 ZNF316A6NFI3 1004 aaPredicted RBP22.09■■□□□ 1.13
COL15A1-204ENST00000496686 ARHGEF12Q9NZN5 1544 aa22.09■■□□□ 1.13
COL15A1-204ENST00000496686 KDM5DQ9BY66 1539 aa22.08■■□□□ 1.13
COL15A1-204ENST00000496686 SIN3AQ96ST3 1273 aa22.07■■□□□ 1.12
COL15A1-204ENST00000496686 PZPP20742 1482 aa22.06■■□□□ 1.12
COL15A1-204ENST00000496686 FANCAO15360 1455 aa22.04■■□□□ 1.12
COL15A1-204ENST00000496686 RIMBP3CA6NJZ7 1639 aa22.04■■□□□ 1.12
COL15A1-204ENST00000496686 RIMBP3BA6NNM3 1639 aa22.04■■□□□ 1.12
COL15A1-204ENST00000496686 RIMBP3Q9UFD9 1639 aa22.04■■□□□ 1.12
COL15A1-204ENST00000496686 RTEL1-TNFRSF6BF6WH68 1400 aa22.04■■□□□ 1.12
COL15A1-204ENST00000496686 NEUROD1Q13562 356 aa22.02■■□□□ 1.12
COL15A1-204ENST00000496686 DUOX2Q9NRD8 1548 aa22.01■■□□□ 1.11
COL15A1-204ENST00000496686 TONSLQ96HA7 1378 aa22.01■■□□□ 1.11
COL15A1-204ENST00000496686 CFAP74Q9C0B2 1584 aa22.01■■□□□ 1.11
COL15A1-204ENST00000496686 ANKRD30BQ9BXX2 1392 aa21.99■■□□□ 1.11
COL15A1-204ENST00000496686 TRAPPC8Q9Y2L5 1435 aa21.99■■□□□ 1.11
COL15A1-204ENST00000496686 SLC4A1APQ9BWU0 796 aaKnown RBP21.99■■□□□ 1.11
COL15A1-204ENST00000496686 ERBINQ96RT1 1412 aa21.98■■□□□ 1.11
COL15A1-204ENST00000496686 ADGRL1O94910 1474 aa21.96■■□□□ 1.11
COL15A1-204ENST00000496686 UNC13BO14795 1591 aa21.96■■□□□ 1.11
COL15A1-204ENST00000496686 PPP1R15AO75807 674 aaPredicted RBP21.95■■□□□ 1.1
COL15A1-204ENST00000496686 CD109Q6YHK3 1445 aa21.95■■□□□ 1.1
COL15A1-204ENST00000496686 ZFYVE16Q7Z3T8 1539 aa21.95■■□□□ 1.1
COL15A1-204ENST00000496686 SPAG9O60271 1321 aaKnown RBP21.93■■□□□ 1.1
COL15A1-204ENST00000496686 NUP155O75694 1391 aa21.93■■□□□ 1.1
COL15A1-204ENST00000496686 RPRD2Q5VT52 1461 aaKnown RBP21.93■■□□□ 1.1
COL15A1-204ENST00000496686 INO80Q9ULG1 1556 aaPredicted RBP21.92■■□□□ 1.1
COL15A1-204ENST00000496686 SCAPERQ9BY12 1400 aa21.92■■□□□ 1.1
COL15A1-204ENST00000496686 GLI2P10070 1586 aa21.91■■□□□ 1.1
COL15A1-204ENST00000496686 MAGI2Q86UL8 1455 aa21.9■■□□□ 1.1
COL15A1-204ENST00000496686 NEO1Q92859 1461 aa21.9■■□□□ 1.1
COL15A1-204ENST00000496686 CYB5RLQ6IPT4 315 aa21.89■■□□□ 1.09
COL15A1-204ENST00000496686 AEBP2Q6ZN18 517 aaPredicted RBP21.89■■□□□ 1.09
COL15A1-204ENST00000496686 ATP7AQ04656 1500 aa21.89■■□□□ 1.09
COL15A1-204ENST00000496686 FAM135AQ9P2D6 1515 aa21.87■■□□□ 1.09
COL15A1-204ENST00000496686 DIEXFQ68CQ4 756 aaKnown RBP21.87■■□□□ 1.09
COL15A1-204ENST00000496686 ZNF518AQ6AHZ1 1483 aa21.87■■□□□ 1.09
COL15A1-204ENST00000496686 PKD2Q13563 968 aa21.86■■□□□ 1.09
COL15A1-204ENST00000496686 IQGAP3Q86VI3 1631 aa21.86■■□□□ 1.09
COL15A1-204ENST00000496686 MAP3K4Q9Y6R4 1608 aa21.84■■□□□ 1.09
COL15A1-204ENST00000496686 AFAP1Q8N556 730 aa21.84■■□□□ 1.09
COL15A1-204ENST00000496686 POGZQ7Z3K3 1410 aa21.83■■□□□ 1.09
COL15A1-204ENST00000496686 FOXD1Q16676 465 aa21.83■■□□□ 1.09
COL15A1-204ENST00000496686 KDM5CP41229 1560 aa21.82■■□□□ 1.08
COL15A1-204ENST00000496686 TEX14Q8IWB6 1497 aa21.82■■□□□ 1.08
COL15A1-204ENST00000496686 EIF2AK4Q9P2K8 1649 aaKnown RBP21.8■■□□□ 1.08
COL15A1-204ENST00000496686 MLH3Q9UHC1 1453 aa21.78■■□□□ 1.08
COL15A1-204ENST00000496686 DEPDC5O75140 1603 aa21.77■■□□□ 1.08
COL15A1-204ENST00000496686 DHX29Q7Z478 1369 aaKnown RBP21.77■■□□□ 1.08
COL15A1-204ENST00000496686 DIP2BQ9P265 1576 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms