RNA–Protein interactions for RNA: ENST00000496616.5

PPEF1-209, Transcript of protein phosphatase with EF-hand domain 1, human

TSL 3

Gene PPEF1, Length 906 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPEF1-209	ENST00000496616	PLCB2	Q00722	1185 aa		11.15	□□□□□ -0.62
PPEF1-209	ENST00000496616	P3H3	Q8IVL6	736 aa		11.14	□□□□□ -0.63
PPEF1-209	ENST00000496616	TSPOAP1	O95153	1857 aa		11.14	□□□□□ -0.63
PPEF1-209	ENST00000496616	PPRC1	Q5VV67	1664 aa	Known RBP	11.14	□□□□□ -0.63
PPEF1-209	ENST00000496616	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.13	□□□□□ -0.63
PPEF1-209	ENST00000496616	RSPH6A	Q9H0K4	717 aa		11.13	□□□□□ -0.63
PPEF1-209	ENST00000496616	FHOD3	Q2V2M9	1422 aa		11.12	□□□□□ -0.63
PPEF1-209	ENST00000496616	ASXL2	Q76L83	1435 aa		11.12	□□□□□ -0.63
PPEF1-209	ENST00000496616	LOC105371045	A0A1W2PR82	267 aa		11.12	□□□□□ -0.63
PPEF1-209	ENST00000496616	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.12	□□□□□ -0.63
PPEF1-209	ENST00000496616	EFCAB5	A4FU69	1503 aa		11.12	□□□□□ -0.63
PPEF1-209	ENST00000496616	RAPGEF6	Q8TEU7	1601 aa		11.12	□□□□□ -0.63
PPEF1-209	ENST00000496616	NPM1	P06748	294 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
PPEF1-209	ENST00000496616	ARHGAP35	Q9NRY4	1499 aa		11.11	□□□□□ -0.63
PPEF1-209	ENST00000496616	GLI2	P10070	1586 aa		11.11	□□□□□ -0.63
PPEF1-209	ENST00000496616	AAMP	Q13685	434 aa		11.1	□□□□□ -0.63
PPEF1-209	ENST00000496616	ARID3A	Q99856	593 aa		11.1	□□□□□ -0.63
PPEF1-209	ENST00000496616	ATP10B	O94823	1461 aa		11.09	□□□□□ -0.63
PPEF1-209	ENST00000496616	LRRIQ1	Q96JM4	1722 aa		11.09	□□□□□ -0.63
PPEF1-209	ENST00000496616	MAP3K4	Q9Y6R4	1608 aa		11.09	□□□□□ -0.63
PPEF1-209	ENST00000496616	EPRS	P07814	1512 aa	Known RBP	11.09	□□□□□ -0.63
PPEF1-209	ENST00000496616	NUP153	P49790	1475 aa	Known RBP	11.08	□□□□□ -0.64
PPEF1-209	ENST00000496616	FAM69C	Q0P6D2	419 aa		11.08	□□□□□ -0.64
PPEF1-209	ENST00000496616	TRIM26	Q12899	539 aa	Predicted RBP	11.08	□□□□□ -0.64
PPEF1-209	ENST00000496616	UBTF	P17480	764 aa	Known RBP	11.07	□□□□□ -0.64
PPEF1-209	ENST00000496616	HAP1	P54257	671 aa	Predicted RBP	11.06	□□□□□ -0.64
PPEF1-209	ENST00000496616	WDR7	Q9Y4E6	1490 aa		11.06	□□□□□ -0.64
PPEF1-209	ENST00000496616	NEUROD1	Q13562	356 aa		11.03	□□□□□ -0.64
PPEF1-209	ENST00000496616	CFAP43	Q8NDM7	1665 aa		11.03	□□□□□ -0.64
PPEF1-209	ENST00000496616	ARID3C	A6NKF2	412 aa		11.01	□□□□□ -0.65
PPEF1-209	ENST00000496616	NAP1L5	Q96NT1	182 aa	Predicted RBP	11.01	□□□□□ -0.65
PPEF1-209	ENST00000496616	CDK13	Q14004	1512 aa	Known RBP	11	□□□□□ -0.65
PPEF1-209	ENST00000496616	ABCA9	Q8IUA7	1624 aa		11	□□□□□ -0.65
PPEF1-209	ENST00000496616	SALL2	Q9Y467	1007 aa	Predicted RBP	11	□□□□□ -0.65
PPEF1-209	ENST00000496616	COL17A1	Q9UMD9	1497 aa	Predicted RBP	10.99	□□□□□ -0.65
PPEF1-209	ENST00000496616	PPARGC1B	Q86YN6	1023 aa	Known RBP	10.98	□□□□□ -0.65
PPEF1-209	ENST00000496616	FMN1	Q68DA7	1419 aa		10.98	□□□□□ -0.65
PPEF1-209	ENST00000496616	PCF11	O94913	1555 aa	Known RBP	10.98	□□□□□ -0.65
PPEF1-209	ENST00000496616	HECW1	Q76N89	1606 aa		10.98	□□□□□ -0.65
PPEF1-209	ENST00000496616	KDM6B	O15054	1643 aa		10.97	□□□□□ -0.65
PPEF1-209	ENST00000496616	MAGI3	Q5TCQ9	1506 aa		10.96	□□□□□ -0.65
PPEF1-209	ENST00000496616	CLIP1	P30622	1438 aa		10.96	□□□□□ -0.65
PPEF1-209	ENST00000496616	DHX37	Q8IY37	1157 aa	Known RBP	10.96	□□□□□ -0.65
PPEF1-209	ENST00000496616	KCNH8	Q96L42	1107 aa		10.96	□□□□□ -0.65
PPEF1-209	ENST00000496616	VSIG10	Q8N0Z9	540 aa		10.95	□□□□□ -0.66
PPEF1-209	ENST00000496616	YTHDC1	Q96MU7	727 aa	Known RBP	10.95	□□□□□ -0.66
PPEF1-209	ENST00000496616	CD109	Q6YHK3	1445 aa		10.94	□□□□□ -0.66
PPEF1-209	ENST00000496616	TTC37	Q6PGP7	1564 aa		10.94	□□□□□ -0.66
PPEF1-209	ENST00000496616	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	10.94	□□□□□ -0.66
PPEF1-209	ENST00000496616	CASKIN1	Q8WXD9	1431 aa		10.93	□□□□□ -0.66
PPEF1-209	ENST00000496616	KIF14	Q15058	1648 aa		10.92	□□□□□ -0.66
PPEF1-209	ENST00000496616	TEX14	Q8IWB6	1497 aa		10.92	□□□□□ -0.66
PPEF1-209	ENST00000496616	CEP162	Q5TB80	1403 aa		10.92	□□□□□ -0.66
PPEF1-209	ENST00000496616	RBM10	P98175	930 aa	Known RBP	10.91	□□□□□ -0.66
PPEF1-209	ENST00000496616	PUS7	Q96PZ0	661 aa	Known RBP	10.91	□□□□□ -0.66
PPEF1-209	ENST00000496616	FYCO1	Q9BQS8	1478 aa		10.9	□□□□□ -0.66
PPEF1-209	ENST00000496616	PLEKHD1	A6NEE1	506 aa		10.88	□□□□□ -0.67
PPEF1-209	ENST00000496616	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	10.88	□□□□□ -0.67
PPEF1-209	ENST00000496616	HNRNPUL2	Q1KMD3	747 aa	Known RBP	10.88	□□□□□ -0.67
PPEF1-209	ENST00000496616	CCDC9	Q9Y3X0	531 aa	Known RBP	10.88	□□□□□ -0.67
PPEF1-209	ENST00000496616	CDC42BPB	Q9Y5S2	1711 aa		10.88	□□□□□ -0.67
PPEF1-209	ENST00000496616	ARAP3	Q8WWN8	1544 aa		10.88	□□□□□ -0.67
PPEF1-209	ENST00000496616	MYO5C	Q9NQX4	1742 aa		10.87	□□□□□ -0.67
PPEF1-209	ENST00000496616	FRMPD1	Q5SYB0	1578 aa		10.87	□□□□□ -0.67
PPEF1-209	ENST00000496616	ZMYND15	Q9H091	742 aa		10.87	□□□□□ -0.67
PPEF1-209	ENST00000496616	RICTOR	Q6R327	1708 aa		10.87	□□□□□ -0.67
PPEF1-209	ENST00000496616	TRO	Q12816	1431 aa	Predicted RBP	10.86	□□□□□ -0.67
PPEF1-209	ENST00000496616	CDC42BPA	Q5VT25	1732 aa		10.86	□□□□□ -0.67
PPEF1-209	ENST00000496616	CCDC18	Q5T9S5	1454 aa		10.86	□□□□□ -0.67
PPEF1-209	ENST00000496616	ATP1B4	Q9UN42	357 aa	Predicted RBP	10.85	□□□□□ -0.67
PPEF1-209	ENST00000496616	NEO1	Q92859	1461 aa		10.85	□□□□□ -0.67
PPEF1-209	ENST00000496616	CLSTN1	O94985	981 aa		10.83	□□□□□ -0.68
PPEF1-209	ENST00000496616	PLCH2	O75038	1416 aa		10.83	□□□□□ -0.68
PPEF1-209	ENST00000496616	POLR3GL	Q9BT43	218 aa		10.82	□□□□□ -0.68
PPEF1-209	ENST00000496616	PREX2	Q70Z35	1606 aa		10.82	□□□□□ -0.68
PPEF1-209	ENST00000496616	CFAP74	Q9C0B2	1584 aa		10.82	□□□□□ -0.68
PPEF1-209	ENST00000496616	FANCA	O15360	1455 aa		10.81	□□□□□ -0.68
PPEF1-209	ENST00000496616	PHLDB1	Q86UU1	1377 aa		10.81	□□□□□ -0.68
PPEF1-209	ENST00000496616	DEK	P35659	375 aa	Known RBP	10.81	□□□□□ -0.68
PPEF1-209	ENST00000496616	TICAM2	Q86XR7	235 aa		10.81	□□□□□ -0.68
PPEF1-209	ENST00000496616	AKNA	Q7Z591	1439 aa		10.81	□□□□□ -0.68
PPEF1-209	ENST00000496616		A0A0U1RQG5	324 aa	Predicted RBP	10.8	□□□□□ -0.68
PPEF1-209	ENST00000496616	SIGLEC1	Q9BZZ2	1709 aa		10.79	□□□□□ -0.68
PPEF1-209	ENST00000496616	VPS8	Q8N3P4	1428 aa		10.79	□□□□□ -0.68
PPEF1-209	ENST00000496616	RAPGEF3	O95398	923 aa		10.78	□□□□□ -0.68
PPEF1-209	ENST00000496616	NCL	P19338	710 aa	Known RBP	10.78	□□□□□ -0.68
PPEF1-209	ENST00000496616	ILDR1	Q86SU0	546 aa	Predicted RBP	10.78	□□□□□ -0.68
PPEF1-209	ENST00000496616	CCDC136	Q96JN2	1154 aa		10.78	□□□□□ -0.68
PPEF1-209	ENST00000496616	PPP6R1	Q9UPN7	881 aa		10.78	□□□□□ -0.68
PPEF1-209	ENST00000496616	TIAM1	Q13009	1591 aa		10.77	□□□□□ -0.68
PPEF1-209	ENST00000496616	KDM4F	A0A1W2PPD8	638 aa		10.77	□□□□□ -0.69
PPEF1-209	ENST00000496616	ADRA2B	P18089	450 aa		10.77	□□□□□ -0.69
PPEF1-209	ENST00000496616	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	10.77	□□□□□ -0.69
PPEF1-209	ENST00000496616	TEX2	Q8IWB9	1127 aa		10.77	□□□□□ -0.69
PPEF1-209	ENST00000496616	ZMYM4	Q5VZL5	1548 aa		10.77	□□□□□ -0.69
PPEF1-209	ENST00000496616	ITSN2	Q9NZM3	1697 aa		10.76	□□□□□ -0.69
PPEF1-209	ENST00000496616	ARHGEF12	Q9NZN5	1544 aa		10.76	□□□□□ -0.69
PPEF1-209	ENST00000496616	IPO4	Q8TEX9	1081 aa	Known RBP	10.76	□□□□□ -0.69
PPEF1-209	ENST00000496616	DENND4B	O75064	1496 aa	Predicted RBP	10.75	□□□□□ -0.69
PPEF1-209	ENST00000496616	ADGRL1	O94910	1474 aa		10.75	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms