RNA–Protein interactions for RNA: ENST00000496524.5

NPHP1-211, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 10,006 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-211ENST00000496524 DCTN1Q14203 1278 aa10.28□□□□□ -0.76
NPHP1-211ENST00000496524 AK7Q96M32 723 aa10.27□□□□□ -0.77
NPHP1-211ENST00000496524 IPO9Q96P70 1041 aaKnown RBP10.27□□□□□ -0.77
NPHP1-211ENST00000496524 TPM2P07951 284 aa10.26□□□□□ -0.77
NPHP1-211ENST00000496524 ARGLU1Q9NWB6 273 aaPredicted RBP10.26□□□□□ -0.77
NPHP1-211ENST00000496524 GOLGA6L19H0YKK7 550 aa10.26□□□□□ -0.77
NPHP1-211ENST00000496524 B4GALNT3Q6L9W6 998 aa10.26□□□□□ -0.77
NPHP1-211ENST00000496524 NPHP1O15259 732 aa10.26□□□□□ -0.77
NPHP1-211ENST00000496524 IPO8O15397 1037 aaKnown RBP10.26□□□□□ -0.77
NPHP1-211ENST00000496524 CHMP4AQ9BY43 222 aa10.26□□□□□ -0.77
NPHP1-211ENST00000496524 ZBTB7CA1YPR0 619 aa10.25□□□□□ -0.77
NPHP1-211ENST00000496524 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.25□□□□□ -0.77
NPHP1-211ENST00000496524 ATP6V1DQ9Y5K8 247 aa10.24□□□□□ -0.77
NPHP1-211ENST00000496524 RUFY1Q96T51 708 aa10.24□□□□□ -0.77
NPHP1-211ENST00000496524 PATL2C9JE40 543 aaKnown RBP10.24□□□□□ -0.77
NPHP1-211ENST00000496524 P3H3Q8IVL6 736 aa10.24□□□□□ -0.77
NPHP1-211ENST00000496524 SPRYD3Q8NCJ5 442 aa10.24□□□□□ -0.77
NPHP1-211ENST00000496524 KIF16BQ96L93 1317 aa10.23□□□□□ -0.77
NPHP1-211ENST00000496524 NPM1P06748 294 aaKnown RBP eCLIP10.23□□□□□ -0.77
NPHP1-211ENST00000496524 PMFBP1Q8TBY8 1022 aa10.23□□□□□ -0.77
NPHP1-211ENST00000496524 IPO7O95373 1038 aaKnown RBP10.23□□□□□ -0.77
NPHP1-211ENST00000496524 HSP90B2PQ58FF3 399 aa10.22□□□□□ -0.77
NPHP1-211ENST00000496524 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.22□□□□□ -0.77
NPHP1-211ENST00000496524 HDAC5Q9UQL6 1122 aa10.22□□□□□ -0.77
NPHP1-211ENST00000496524 C14orf37Q86TY3 774 aa10.22□□□□□ -0.77
NPHP1-211ENST00000496524 RWDD1Q9H446 243 aaPredicted RBP10.22□□□□□ -0.77
NPHP1-211ENST00000496524 NEXNQ0ZGT2 675 aa10.22□□□□□ -0.77
NPHP1-211ENST00000496524 GSE1Q14687 1217 aa10.22□□□□□ -0.77
NPHP1-211ENST00000496524 ST18O60284 1047 aa10.21□□□□□ -0.77
NPHP1-211ENST00000496524 GPATCH3Q96I76 525 aa10.21□□□□□ -0.77
NPHP1-211ENST00000496524 TPD52L1Q16890 204 aaPredicted RBP10.21□□□□□ -0.78
NPHP1-211ENST00000496524 CCDC180Q9P1Z9 1646 aa10.2□□□□□ -0.78
NPHP1-211ENST00000496524 ERCC4Q92889 916 aaPredicted RBP10.2□□□□□ -0.78
NPHP1-211ENST00000496524 H0YHG0 523 aa10.2□□□□□ -0.78
NPHP1-211ENST00000496524 CCAR2Q8N163 923 aaKnown RBP10.2□□□□□ -0.78
NPHP1-211ENST00000496524 CCER2I3L3R5 266 aa10.2□□□□□ -0.78
NPHP1-211ENST00000496524 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.19□□□□□ -0.78
NPHP1-211ENST00000496524 DIAPH3Q9NSV4 1193 aa10.19□□□□□ -0.78
NPHP1-211ENST00000496524 RASSF8Q8NHQ8 419 aa10.19□□□□□ -0.78
NPHP1-211ENST00000496524 SLKQ9H2G2 1235 aaPredicted RBP10.19□□□□□ -0.78
NPHP1-211ENST00000496524 BECN2A8MW95 431 aa10.18□□□□□ -0.78
NPHP1-211ENST00000496524 PODXL2Q9NZ53 605 aa10.18□□□□□ -0.78
NPHP1-211ENST00000496524 USP8P40818 1118 aa10.18□□□□□ -0.78
NPHP1-211ENST00000496524 TAF3Q5VWG9 929 aa10.18□□□□□ -0.78
NPHP1-211ENST00000496524 ZRSR2Q15696 482 aaKnown RBP10.17□□□□□ -0.78
NPHP1-211ENST00000496524 TAF7LQ5H9L4 462 aa10.17□□□□□ -0.78
NPHP1-211ENST00000496524 ANKRD20A12PQ8NF67 263 aa10.17□□□□□ -0.78
NPHP1-211ENST00000496524 PKNOX2Q96KN3 472 aa10.17□□□□□ -0.78
NPHP1-211ENST00000496524 SF3A1Q15459 793 aaKnown RBP10.17□□□□□ -0.78
NPHP1-211ENST00000496524 MYO6Q9UM54 1294 aa10.17□□□□□ -0.78
NPHP1-211ENST00000496524 MTUS2Q5JR59 1369 aa10.17□□□□□ -0.78
NPHP1-211ENST00000496524 NEUROD2Q15784 382 aa10.16□□□□□ -0.78
NPHP1-211ENST00000496524 PPP1R15AO75807 674 aaPredicted RBP10.16□□□□□ -0.78
NPHP1-211ENST00000496524 NEFHP12036 1026 aa10.16□□□□□ -0.78
NPHP1-211ENST00000496524 ISY1Q9ULR0 285 aaKnown RBP10.16□□□□□ -0.78
NPHP1-211ENST00000496524 CAGE1Q8TC20 777 aa10.16□□□□□ -0.78
NPHP1-211ENST00000496524 FAM13BQ9NYF5 915 aa10.16□□□□□ -0.78
NPHP1-211ENST00000496524 HOOK1Q9UJC3 728 aaKnown RBP10.16□□□□□ -0.78
NPHP1-211ENST00000496524 INCENPQ9NQS7 918 aa10.15□□□□□ -0.78
NPHP1-211ENST00000496524 FAM43AQ8N2R8 423 aa10.15□□□□□ -0.78
NPHP1-211ENST00000496524 ARID3CA6NKF2 412 aa10.15□□□□□ -0.78
NPHP1-211ENST00000496524 CHIC2Q9UKJ5 165 aa10.15□□□□□ -0.78
NPHP1-211ENST00000496524 CARD11Q9BXL7 1154 aa10.15□□□□□ -0.79
NPHP1-211ENST00000496524 CREBRFQ8IUR6 639 aa10.15□□□□□ -0.79
NPHP1-211ENST00000496524 GOLGA6L7A0A1B0GV03 622 aa10.14□□□□□ -0.79
NPHP1-211ENST00000496524 LEKR1Q6ZMV7 388 aa10.14□□□□□ -0.79
NPHP1-211ENST00000496524 PES1O00541 588 aaKnown RBP10.14□□□□□ -0.79
NPHP1-211ENST00000496524 HOMER1Q86YM7 354 aa10.14□□□□□ -0.79
NPHP1-211ENST00000496524 CCDC173Q0VFZ6 552 aa10.13□□□□□ -0.79
NPHP1-211ENST00000496524 DDX49Q9Y6V7 483 aaKnown RBP10.13□□□□□ -0.79
NPHP1-211ENST00000496524 DYDC1Q8WWB3 177 aa10.13□□□□□ -0.79
NPHP1-211ENST00000496524 RSF1Q96T23 1441 aaPredicted RBP10.13□□□□□ -0.79
NPHP1-211ENST00000496524 HIRIP3Q9BW71 556 aaPredicted RBP10.12□□□□□ -0.79
NPHP1-211ENST00000496524 CCDC47Q96A33 483 aaKnown RBP10.12□□□□□ -0.79
NPHP1-211ENST00000496524 PDE4CQ08493 712 aa10.12□□□□□ -0.79
NPHP1-211ENST00000496524 ZNF592Q92610 1267 aa10.12□□□□□ -0.79
NPHP1-211ENST00000496524 RTF1Q92541 710 aaKnown RBP10.11□□□□□ -0.79
NPHP1-211ENST00000496524 MNS1Q8NEH6 495 aa10.11□□□□□ -0.79
NPHP1-211ENST00000496524 TIMELESSQ9UNS1 1208 aa10.11□□□□□ -0.79
NPHP1-211ENST00000496524 H3BQV1 296 aa10.1□□□□□ -0.79
NPHP1-211ENST00000496524 IFFO2Q5TF58 517 aa10.1□□□□□ -0.79
NPHP1-211ENST00000496524 U2SURPO15042 1029 aaKnown RBP10.1□□□□□ -0.79
NPHP1-211ENST00000496524 DEF6Q9H4E7 631 aa10.1□□□□□ -0.79
NPHP1-211ENST00000496524 RCAN3Q9UKA8 241 aa10.09□□□□□ -0.79
NPHP1-211ENST00000496524 TMF1P82094 1093 aa10.09□□□□□ -0.79
NPHP1-211ENST00000496524 TMX4Q9H1E5 349 aaPredicted RBP10.09□□□□□ -0.79
NPHP1-211ENST00000496524 DHX8Q14562 1220 aaKnown RBP10.09□□□□□ -0.79
NPHP1-211ENST00000496524 HMGN5P82970 282 aaKnown RBP10.08□□□□□ -0.8
NPHP1-211ENST00000496524 MARCH6O60337 910 aa10.08□□□□□ -0.8
NPHP1-211ENST00000496524 MFAP1P55081 439 aaKnown RBP10.08□□□□□ -0.8
NPHP1-211ENST00000496524 FAM184AQ8NB25 1140 aa10.08□□□□□ -0.8
NPHP1-211ENST00000496524 HSP90AB3PQ58FF7 597 aa10.08□□□□□ -0.8
NPHP1-211ENST00000496524 CCP110O43303 1012 aa10.08□□□□□ -0.8
NPHP1-211ENST00000496524 TRIM6-TRIM34B2RNG4 842 aa10.07□□□□□ -0.8
NPHP1-211ENST00000496524 TSPYL1Q9H0U9 437 aa10.07□□□□□ -0.8
NPHP1-211ENST00000496524 KIAA0754O94854 1291 aa10.06□□□□□ -0.8
NPHP1-211ENST00000496524 GORABQ5T7V8 394 aa10.06□□□□□ -0.8
NPHP1-211ENST00000496524 CPLX2Q6PUV4 134 aaKnown RBP10.06□□□□□ -0.8
NPHP1-211ENST00000496524 LRRFIP1Q32MZ4 808 aaKnown RBP10.06□□□□□ -0.8
NPHP1-211ENST00000496524 PCMTD1Q96MG8 357 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms