RNA–Protein interactions for RNA: ENST00000496104.1

XPA-204, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-204ENST00000496104 PBRM1Q86U86 1689 aa9.37□□□□□ -0.91
XPA-204ENST00000496104 ATMINO43313 823 aaPredicted RBP9.36□□□□□ -0.91
XPA-204ENST00000496104 STAG3Q9UJ98 1225 aa9.36□□□□□ -0.91
XPA-204ENST00000496104 SOGA1O94964 1423 aa9.36□□□□□ -0.91
XPA-204ENST00000496104 MS4A3Q96HJ5 214 aa9.34□□□□□ -0.91
XPA-204ENST00000496104 SCUBE2Q9NQ36 999 aa9.34□□□□□ -0.91
XPA-204ENST00000496104 FGD5Q6ZNL6 1462 aa9.34□□□□□ -0.91
XPA-204ENST00000496104 GRIN2AQ12879 1464 aa9.32□□□□□ -0.92
XPA-204ENST00000496104 CCDC88BA6NC98 1476 aa9.31□□□□□ -0.92
XPA-204ENST00000496104 ABCA5Q8WWZ7 1642 aa9.3□□□□□ -0.92
XPA-204ENST00000496104 NPM1P06748 294 aaKnown RBP eCLIP9.29□□□□□ -0.92
XPA-204ENST00000496104 CDAN1Q8IWY9 1227 aa9.28□□□□□ -0.92
XPA-204ENST00000496104 ADAMTS12P58397 1594 aa9.27□□□□□ -0.93
XPA-204ENST00000496104 TOP2BQ02880 1626 aa9.27□□□□□ -0.93
XPA-204ENST00000496104 MNX1P50219 401 aaPredicted RBP9.26□□□□□ -0.93
XPA-204ENST00000496104 CUX1P39880 1505 aa9.26□□□□□ -0.93
XPA-204ENST00000496104 PCF11O94913 1555 aaKnown RBP9.25□□□□□ -0.93
XPA-204ENST00000496104 PRG4Q92954 1404 aaPredicted RBP9.25□□□□□ -0.93
XPA-204ENST00000496104 ATN1P54259 1190 aaPredicted RBP9.24□□□□□ -0.93
XPA-204ENST00000496104 GLI2P10070 1586 aa9.24□□□□□ -0.93
XPA-204ENST00000496104 CERKQ8TCT0 537 aa9.23□□□□□ -0.93
XPA-204ENST00000496104 POTEFA5A3E0 1075 aa9.22□□□□□ -0.93
XPA-204ENST00000496104 KIF21BO75037 1637 aa9.21□□□□□ -0.93
XPA-204ENST00000496104 PTPRMP28827 1452 aa9.21□□□□□ -0.94
XPA-204ENST00000496104 ADAMTSL3P82987 1691 aa9.2□□□□□ -0.94
XPA-204ENST00000496104 MAP3K4Q9Y6R4 1608 aa9.2□□□□□ -0.94
XPA-204ENST00000496104 RUSC2Q8N2Y8 1516 aa9.18□□□□□ -0.94
XPA-204ENST00000496104 ABCA10Q8WWZ4 1543 aa9.18□□□□□ -0.94
XPA-204ENST00000496104 BMP2KQ9NSY1 1161 aaPredicted RBP9.14□□□□□ -0.95
XPA-204ENST00000496104 ASXL2Q76L83 1435 aa9.14□□□□□ -0.95
XPA-204ENST00000496104 TSPYL2Q9H2G4 693 aaPredicted RBP9.13□□□□□ -0.95
XPA-204ENST00000496104 RTN4Q9NQC3 1192 aaKnown RBP9.13□□□□□ -0.95
XPA-204ENST00000496104 ABCC2Q92887 1545 aa9.12□□□□□ -0.95
XPA-204ENST00000496104 JPH4Q96JJ6 628 aa9.12□□□□□ -0.95
XPA-204ENST00000496104 TRPC6Q9Y210 931 aa9.12□□□□□ -0.95
XPA-204ENST00000496104 HSPA2P54652 639 aa9.11□□□□□ -0.95
XPA-204ENST00000496104 CCDC61Q9Y6R9 512 aa9.11□□□□□ -0.95
XPA-204ENST00000496104 FHAD1B1AJZ9 1412 aa9.11□□□□□ -0.95
XPA-204ENST00000496104 MADDQ8WXG6 1647 aa9.1□□□□□ -0.95
XPA-204ENST00000496104 MMRN1Q13201 1228 aa9.1□□□□□ -0.95
XPA-204ENST00000496104 EPRSP07814 1512 aaKnown RBP9.1□□□□□ -0.95
XPA-204ENST00000496104 SPDYE4A6NLX3 237 aa9.09□□□□□ -0.95
XPA-204ENST00000496104 KIF12Q96FN5 646 aa9.09□□□□□ -0.95
XPA-204ENST00000496104 COLQQ9Y215 455 aaPredicted RBP9.09□□□□□ -0.95
XPA-204ENST00000496104 ST18O60284 1047 aa9.08□□□□□ -0.96
XPA-204ENST00000496104 PLB1Q6P1J6 1458 aa9.07□□□□□ -0.96
XPA-204ENST00000496104 CUL7Q14999 1698 aa9.07□□□□□ -0.96
XPA-204ENST00000496104 BCORL1Q5H9F3 1711 aa9.06□□□□□ -0.96
XPA-204ENST00000496104 SEC24BO95487 1268 aa9.06□□□□□ -0.96
XPA-204ENST00000496104 TIE1P35590 1138 aa9.06□□□□□ -0.96
XPA-204ENST00000496104 SPNS2Q8IVW8 549 aa9.06□□□□□ -0.96
XPA-204ENST00000496104 TEX14Q8IWB6 1497 aa9.06□□□□□ -0.96
XPA-204ENST00000496104 KIAA0586Q9BVV6 1533 aa9.04□□□□□ -0.96
XPA-204ENST00000496104 MED1Q15648 1581 aaPredicted RBP9.03□□□□□ -0.96
XPA-204ENST00000496104 AMER1Q5JTC6 1135 aaPredicted RBP9.03□□□□□ -0.96
XPA-204ENST00000496104 STRCQ7RTU9 1775 aa9.03□□□□□ -0.96
XPA-204ENST00000496104 LTBP4Q8N2S1 1624 aa9.02□□□□□ -0.96
XPA-204ENST00000496104 SLAIN1Q8ND83 568 aa9.02□□□□□ -0.97
XPA-204ENST00000496104 ERICH3Q5RHP9 1530 aa9.01□□□□□ -0.97
XPA-204ENST00000496104 MAP3K13O43283 966 aa9.01□□□□□ -0.97
XPA-204ENST00000496104 RIMS1Q86UR5 1692 aaKnown RBP9□□□□□ -0.97
XPA-204ENST00000496104 TTLL13PA6NNM8 815 aa9□□□□□ -0.97
XPA-204ENST00000496104 UHRF1BP1LA0JNW5 1464 aa8.99□□□□□ -0.97
XPA-204ENST00000496104 MAGI3Q5TCQ9 1506 aa8.98□□□□□ -0.97
XPA-204ENST00000496104 KDM5BQ9UGL1 1544 aa8.98□□□□□ -0.97
XPA-204ENST00000496104 SIGLEC1Q9BZZ2 1709 aa8.97□□□□□ -0.97
XPA-204ENST00000496104 ZCCHC11Q5TAX3 1644 aaKnown RBP8.96□□□□□ -0.98
XPA-204ENST00000496104 FRMPD1Q5SYB0 1578 aa8.95□□□□□ -0.98
XPA-204ENST00000496104 SRCAPQ6ZRS2 3230 aa8.95□□□□□ -0.98
XPA-204ENST00000496104 IER5LQ5T953 404 aa8.95□□□□□ -0.98
XPA-204ENST00000496104 TRIM35Q9UPQ4 493 aa8.95□□□□□ -0.98
XPA-204ENST00000496104 PTPRGP23470 1445 aa8.95□□□□□ -0.98
XPA-204ENST00000496104 ARAP3Q8WWN8 1544 aa8.94□□□□□ -0.98
XPA-204ENST00000496104 IQSEC2Q5JU85 1478 aa8.93□□□□□ -0.98
XPA-204ENST00000496104 CFAP43Q8NDM7 1665 aa8.91□□□□□ -0.98
XPA-204ENST00000496104 WDR7Q9Y4E6 1490 aa8.91□□□□□ -0.98
XPA-204ENST00000496104 TMEM121BQ9BXQ6 578 aaPredicted RBP8.91□□□□□ -0.98
XPA-204ENST00000496104 YEATS2Q9ULM3 1422 aa8.9□□□□□ -0.98
XPA-204ENST00000496104 UACAQ9BZF9 1416 aa8.89□□□□□ -0.99
XPA-204ENST00000496104 FKBP8Q14318 412 aa8.89□□□□□ -0.99
XPA-204ENST00000496104 CD109Q6YHK3 1445 aa8.88□□□□□ -0.99
XPA-204ENST00000496104 RASEFQ8IZ41 740 aa8.88□□□□□ -0.99
XPA-204ENST00000496104 WRNQ14191 1432 aaPredicted RBP eCLIP8.88□□□□□ -0.99
XPA-204ENST00000496104 TNIKQ9UKE5 1360 aa8.87□□□□□ -0.99
XPA-204ENST00000496104 TTC37Q6PGP7 1564 aa8.87□□□□□ -0.99
XPA-204ENST00000496104 ARHGEF40Q8TER5 1519 aa8.87□□□□□ -0.99
XPA-204ENST00000496104 MARVELD3Q96A59 401 aa8.87□□□□□ -0.99
XPA-204ENST00000496104 PREX1Q8TCU6 1659 aa8.87□□□□□ -0.99
XPA-204ENST00000496104 BIVM-ERCC5R4GMW8 1640 aa8.86□□□□□ -0.99
XPA-204ENST00000496104 DISP1Q96F81 1524 aa8.85□□□□□ -0.99
XPA-204ENST00000496104 PLCG2P16885 1265 aa8.85□□□□□ -0.99
XPA-204ENST00000496104 PTPRTO14522 1441 aa8.85□□□□□ -0.99
XPA-204ENST00000496104 TTBK1Q5TCY1 1321 aaPredicted RBP8.84□□□□□ -0.99
XPA-204ENST00000496104 SNPHO15079 494 aa8.83□□□□□ -1
XPA-204ENST00000496104 SGIP1Q9BQI5 828 aa8.83□□□□□ -1
XPA-204ENST00000496104 PCDHB13Q9Y5F0 798 aa8.83□□□□□ -1
XPA-204ENST00000496104 RAPGEF3O95398 923 aa8.82□□□□□ -1
XPA-204ENST00000496104 RGS17Q9UGC6 210 aaPredicted RBP8.81□□□□□ -1
XPA-204ENST00000496104 FER1L4A9Z1Z3 1794 aa8.81□□□□□ -1
XPA-204ENST00000496104 HSPA1LP34931 641 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 270 ms