RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 DENND4BO75064 1496 aaPredicted RBP16.89■□□□□ 0.29
SMARCAL1-213ENST00000496037 FER1L4A9Z1Z3 1794 aa16.89■□□□□ 0.29
SMARCAL1-213ENST00000496037 CTTNBP2Q8WZ74 1663 aa16.88■□□□□ 0.29
SMARCAL1-213ENST00000496037 ATP10BO94823 1461 aa16.87■□□□□ 0.29
SMARCAL1-213ENST00000496037 MLECQ14165 292 aa16.87■□□□□ 0.29
SMARCAL1-213ENST00000496037 EFCAB5A4FU69 1503 aa16.86■□□□□ 0.29
SMARCAL1-213ENST00000496037 ZFYVE16Q7Z3T8 1539 aa16.86■□□□□ 0.29
SMARCAL1-213ENST00000496037 IQSEC2Q5JU85 1478 aa16.85■□□□□ 0.29
SMARCAL1-213ENST00000496037 RICTORQ6R327 1708 aa16.84■□□□□ 0.29
SMARCAL1-213ENST00000496037 FHOD3Q2V2M9 1422 aa16.84■□□□□ 0.29
SMARCAL1-213ENST00000496037 STRCQ7RTU9 1775 aa16.84■□□□□ 0.29
SMARCAL1-213ENST00000496037 UHRF1BP1Q6BDS2 1440 aa16.83■□□□□ 0.28
SMARCAL1-213ENST00000496037 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.83■□□□□ 0.28
SMARCAL1-213ENST00000496037 ZMYM4Q5VZL5 1548 aa16.82■□□□□ 0.28
SMARCAL1-213ENST00000496037 PTPRTO14522 1441 aa16.81■□□□□ 0.28
SMARCAL1-213ENST00000496037 SIGLEC1Q9BZZ2 1709 aa16.8■□□□□ 0.28
SMARCAL1-213ENST00000496037 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.8■□□□□ 0.28
SMARCAL1-213ENST00000496037 SLC24A1O60721 1099 aa16.8■□□□□ 0.28
SMARCAL1-213ENST00000496037 HNRNPUL2Q1KMD3 747 aaKnown RBP16.8■□□□□ 0.28
SMARCAL1-213ENST00000496037 CFAP74Q9C0B2 1584 aa16.8■□□□□ 0.28
SMARCAL1-213ENST00000496037 MAGI2Q86UL8 1455 aa16.79■□□□□ 0.28
SMARCAL1-213ENST00000496037 RNF39Q9H2S5 420 aa16.78■□□□□ 0.28
SMARCAL1-213ENST00000496037 LTBP4Q8N2S1 1624 aa16.78■□□□□ 0.28
SMARCAL1-213ENST00000496037 ARHGEF12Q9NZN5 1544 aa16.77■□□□□ 0.28
SMARCAL1-213ENST00000496037 CEBPAP49715 358 aaPredicted RBP16.75■□□□□ 0.27
SMARCAL1-213ENST00000496037 SLC4A1APQ9BWU0 796 aaKnown RBP16.73■□□□□ 0.27
SMARCAL1-213ENST00000496037 HECW1Q76N89 1606 aa16.71■□□□□ 0.27
SMARCAL1-213ENST00000496037 RAPGEF6Q8TEU7 1601 aa16.71■□□□□ 0.27
SMARCAL1-213ENST00000496037 UBAP1LF5GYI3 381 aa16.71■□□□□ 0.27
SMARCAL1-213ENST00000496037 P3H3Q8IVL6 736 aa16.71■□□□□ 0.27
SMARCAL1-213ENST00000496037 C9orf84Q5VXU9 1444 aa16.7■□□□□ 0.26
SMARCAL1-213ENST00000496037 ATP10AO60312 1499 aa16.68■□□□□ 0.26
SMARCAL1-213ENST00000496037 MED1Q15648 1581 aaPredicted RBP16.68■□□□□ 0.26
SMARCAL1-213ENST00000496037 NCOA1Q15788 1441 aa16.64■□□□□ 0.25
SMARCAL1-213ENST00000496037 PLEKHD1A6NEE1 506 aa16.64■□□□□ 0.25
SMARCAL1-213ENST00000496037 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.64■□□□□ 0.25
SMARCAL1-213ENST00000496037 SETD1BQ9UPS6 1966 aaKnown RBP16.64■□□□□ 0.25
SMARCAL1-213ENST00000496037 NUP153P49790 1475 aaKnown RBP16.63■□□□□ 0.25
SMARCAL1-213ENST00000496037 SCAPERQ9BY12 1400 aa16.62■□□□□ 0.25
SMARCAL1-213ENST00000496037 C1QBPQ07021 282 aaKnown RBP16.6■□□□□ 0.25
SMARCAL1-213ENST00000496037 SLC4A2P04920 1241 aa16.59■□□□□ 0.25
SMARCAL1-213ENST00000496037 ESF1Q9H501 851 aaKnown RBP16.59■□□□□ 0.25
SMARCAL1-213ENST00000496037 ZNF335Q9H4Z2 1342 aaPredicted RBP16.58■□□□□ 0.24
SMARCAL1-213ENST00000496037 TRAPPC8Q9Y2L5 1435 aa16.58■□□□□ 0.24
SMARCAL1-213ENST00000496037 SAMD9Q5K651 1589 aa16.58■□□□□ 0.24
SMARCAL1-213ENST00000496037 C3P01024 1663 aa16.58■□□□□ 0.24
SMARCAL1-213ENST00000496037 CACNB1Q02641 598 aaPredicted RBP16.57■□□□□ 0.24
SMARCAL1-213ENST00000496037 PRXQ9BXM0 1461 aa16.56■□□□□ 0.24
SMARCAL1-213ENST00000496037 CAMSAP1Q5T5Y3 1602 aa16.56■□□□□ 0.24
SMARCAL1-213ENST00000496037 HSPA1LP34931 641 aa16.55■□□□□ 0.24
SMARCAL1-213ENST00000496037 MYT1LQ9UL68 1186 aa16.53■□□□□ 0.24
SMARCAL1-213ENST00000496037 PLCH2O75038 1416 aa16.53■□□□□ 0.24
SMARCAL1-213ENST00000496037 ZNF518AQ6AHZ1 1483 aa16.52■□□□□ 0.23
SMARCAL1-213ENST00000496037 PIP4K2BP78356 416 aa16.5■□□□□ 0.23
SMARCAL1-213ENST00000496037 REREQ9P2R6 1566 aa16.49■□□□□ 0.23
SMARCAL1-213ENST00000496037 NCKAP5LQ9HCH0 1330 aa16.48■□□□□ 0.23
SMARCAL1-213ENST00000496037 CNTLNQ9NXG0 1405 aa16.48■□□□□ 0.23
SMARCAL1-213ENST00000496037 DIP2CQ9Y2E4 1556 aa16.47■□□□□ 0.23
SMARCAL1-213ENST00000496037 TOM1O60784 492 aa16.47■□□□□ 0.23
SMARCAL1-213ENST00000496037 EFCAB2Q5VUJ9 269 aa16.47■□□□□ 0.23
SMARCAL1-213ENST00000496037 U3KPZ7 1027 aaPredicted RBP16.47■□□□□ 0.23
SMARCAL1-213ENST00000496037 KDM5CP41229 1560 aa16.47■□□□□ 0.23
SMARCAL1-213ENST00000496037 AGLP35573 1532 aa16.46■□□□□ 0.23
SMARCAL1-213ENST00000496037 PKD2Q13563 968 aa16.46■□□□□ 0.23
SMARCAL1-213ENST00000496037 NPATQ14207 1427 aa16.45■□□□□ 0.22
SMARCAL1-213ENST00000496037 PLA2R1Q13018 1463 aa16.44■□□□□ 0.22
SMARCAL1-213ENST00000496037 MYO5CQ9NQX4 1742 aa16.43■□□□□ 0.22
SMARCAL1-213ENST00000496037 ABCA6Q8N139 1617 aa16.42■□□□□ 0.22
SMARCAL1-213ENST00000496037 AFAP1Q8N556 730 aa16.42■□□□□ 0.22
SMARCAL1-213ENST00000496037 RANGAP1P46060 587 aaPredicted RBP16.41■□□□□ 0.22
SMARCAL1-213ENST00000496037 TCOF1Q13428 1488 aaKnown RBP16.4■□□□□ 0.22
SMARCAL1-213ENST00000496037 CDK13Q14004 1512 aaKnown RBP16.4■□□□□ 0.22
SMARCAL1-213ENST00000496037 ARHGAP5Q13017 1502 aa16.39■□□□□ 0.21
SMARCAL1-213ENST00000496037 MLH3Q9UHC1 1453 aa16.38■□□□□ 0.21
SMARCAL1-213ENST00000496037 CPS1P31327 1500 aa16.38■□□□□ 0.21
SMARCAL1-213ENST00000496037 MYO3AQ8NEV4 1616 aa16.37■□□□□ 0.21
SMARCAL1-213ENST00000496037 MROH2AA6NES4 1674 aa16.37■□□□□ 0.21
SMARCAL1-213ENST00000496037 ZNF142P52746 1687 aaPredicted RBP16.37■□□□□ 0.21
SMARCAL1-213ENST00000496037 SUPT6HQ7KZ85 1726 aaKnown RBP16.36■□□□□ 0.21
SMARCAL1-213ENST00000496037 CEP170BQ9Y4F5 1589 aaPredicted RBP16.36■□□□□ 0.21
SMARCAL1-213ENST00000496037 PTPRKQ15262 1439 aa16.35■□□□□ 0.21
SMARCAL1-213ENST00000496037 ZMYM3Q14202 1370 aa16.34■□□□□ 0.21
SMARCAL1-213ENST00000496037 KIF14Q15058 1648 aa16.33■□□□□ 0.2
SMARCAL1-213ENST00000496037 FOXD4L1Q9NU39 408 aa16.3■□□□□ 0.2
SMARCAL1-213ENST00000496037 CDK11AQ9UQ88 783 aaPredicted RBP16.3■□□□□ 0.2
SMARCAL1-213ENST00000496037 SHANK2Q9UPX8 1470 aa16.29■□□□□ 0.2
SMARCAL1-213ENST00000496037 ABCC1P33527 1531 aa16.26■□□□□ 0.19
SMARCAL1-213ENST00000496037 CLIP1P30622 1438 aa16.26■□□□□ 0.19
SMARCAL1-213ENST00000496037 RGS17Q9UGC6 210 aaPredicted RBP16.25■□□□□ 0.19
SMARCAL1-213ENST00000496037 ATP1B4Q9UN42 357 aaPredicted RBP16.25■□□□□ 0.19
SMARCAL1-213ENST00000496037 CLTCQ00610 1675 aaKnown RBP16.24■□□□□ 0.19
SMARCAL1-213ENST00000496037 KIDINS220Q9ULH0 1771 aa16.24■□□□□ 0.19
SMARCAL1-213ENST00000496037 MYCNP04198 464 aaPredicted RBP16.24■□□□□ 0.19
SMARCAL1-213ENST00000496037 POLR1AO95602 1720 aaPredicted RBP16.23■□□□□ 0.19
SMARCAL1-213ENST00000496037 TROQ12816 1431 aaPredicted RBP16.23■□□□□ 0.19
SMARCAL1-213ENST00000496037 ITSN2Q9NZM3 1697 aa16.23■□□□□ 0.19
SMARCAL1-213ENST00000496037 ALKQ9UM73 1620 aa16.23■□□□□ 0.19
SMARCAL1-213ENST00000496037 A2ML1A8K2U0 1454 aa16.22■□□□□ 0.19
SMARCAL1-213ENST00000496037 CSRNP3Q8WYN3 585 aa16.22■□□□□ 0.19
SMARCAL1-213ENST00000496037 NEURL4Q96JN8 1562 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms