RNA–Protein interactions for RNA: ENST00000495460.1

NUP58-214, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-214ENST00000495460 CDK11AQ9UQ88 783 aaPredicted RBP24.95■■□□□ 1.58
NUP58-214ENST00000495460 MADDQ8WXG6 1647 aa24.94■■□□□ 1.58
NUP58-214ENST00000495460 TTC37Q6PGP7 1564 aa24.93■■□□□ 1.58
NUP58-214ENST00000495460 PCF11O94913 1555 aaKnown RBP24.91■■□□□ 1.58
NUP58-214ENST00000495460 FBXO41Q8TF61 875 aa24.89■■□□□ 1.58
NUP58-214ENST00000495460 ZFYVE16Q7Z3T8 1539 aa24.88■■□□□ 1.57
NUP58-214ENST00000495460 UBTFP17480 764 aaKnown RBP24.88■■□□□ 1.57
NUP58-214ENST00000495460 EFCAB2Q5VUJ9 269 aa24.88■■□□□ 1.57
NUP58-214ENST00000495460 LMTK3Q96Q04 1460 aa24.88■■□□□ 1.57
NUP58-214ENST00000495460 CDK13Q14004 1512 aaKnown RBP24.87■■□□□ 1.57
NUP58-214ENST00000495460 SCAPERQ9BY12 1400 aa24.86■■□□□ 1.57
NUP58-214ENST00000495460 HECW1Q76N89 1606 aa24.86■■□□□ 1.57
NUP58-214ENST00000495460 ARHGAP35Q9NRY4 1499 aa24.85■■□□□ 1.57
NUP58-214ENST00000495460 YEATS2Q9ULM3 1422 aa24.84■■□□□ 1.57
NUP58-214ENST00000495460 ATP10AO60312 1499 aa24.82■■□□□ 1.56
NUP58-214ENST00000495460 RIMS1Q86UR5 1692 aaKnown RBP24.81■■□□□ 1.56
NUP58-214ENST00000495460 MYO5CQ9NQX4 1742 aa24.8■■□□□ 1.56
NUP58-214ENST00000495460 TROQ12816 1431 aaPredicted RBP24.79■■□□□ 1.56
NUP58-214ENST00000495460 ZNF518AQ6AHZ1 1483 aa24.77■■□□□ 1.56
NUP58-214ENST00000495460 C9orf84Q5VXU9 1444 aa24.76■■□□□ 1.55
NUP58-214ENST00000495460 SIGLEC1Q9BZZ2 1709 aa24.75■■□□□ 1.55
NUP58-214ENST00000495460 CLIP1P30622 1438 aa24.75■■□□□ 1.55
NUP58-214ENST00000495460 ARHGEF12Q9NZN5 1544 aa24.74■■□□□ 1.55
NUP58-214ENST00000495460 KIF14Q15058 1648 aa24.74■■□□□ 1.55
NUP58-214ENST00000495460 ATP1B4Q9UN42 357 aaPredicted RBP24.72■■□□□ 1.55
NUP58-214ENST00000495460 KDM5CP41229 1560 aa24.71■■□□□ 1.55
NUP58-214ENST00000495460 FER1L4A9Z1Z3 1794 aa24.69■■□□□ 1.54
NUP58-214ENST00000495460 REREQ9P2R6 1566 aa24.68■■□□□ 1.54
NUP58-214ENST00000495460 MLH3Q9UHC1 1453 aa24.67■■□□□ 1.54
NUP58-214ENST00000495460 CASKIN1Q8WXD9 1431 aa24.67■■□□□ 1.54
NUP58-214ENST00000495460 CCDC18Q5T9S5 1454 aa24.66■■□□□ 1.54
NUP58-214ENST00000495460 ARHGAP5Q13017 1502 aa24.66■■□□□ 1.54
NUP58-214ENST00000495460 AFAP1Q8N556 730 aa24.65■■□□□ 1.54
NUP58-214ENST00000495460 SETD1BQ9UPS6 1966 aaKnown RBP24.65■■□□□ 1.54
NUP58-214ENST00000495460 MLECQ14165 292 aa24.63■■□□□ 1.53
NUP58-214ENST00000495460 LRRIQ1Q96JM4 1722 aa24.62■■□□□ 1.53
NUP58-214ENST00000495460 HSPA2P54652 639 aa24.62■■□□□ 1.53
NUP58-214ENST00000495460 PPP4R3CPQ6ZMV5 832 aa24.62■■□□□ 1.53
NUP58-214ENST00000495460 CDC42BPBQ9Y5S2 1711 aa24.61■■□□□ 1.53
NUP58-214ENST00000495460 AGLP35573 1532 aa24.6■■□□□ 1.53
NUP58-214ENST00000495460 PREX1Q8TCU6 1659 aa24.59■■□□□ 1.53
NUP58-214ENST00000495460 PREX2Q70Z35 1606 aa24.57■■□□□ 1.52
NUP58-214ENST00000495460 DIP2CQ9Y2E4 1556 aa24.57■■□□□ 1.52
NUP58-214ENST00000495460 EHMT2Q96KQ7 1210 aa24.55■■□□□ 1.52
NUP58-214ENST00000495460 FYCO1Q9BQS8 1478 aa24.54■■□□□ 1.52
NUP58-214ENST00000495460 ABCC1P33527 1531 aa24.54■■□□□ 1.52
NUP58-214ENST00000495460 CERKQ8TCT0 537 aa24.53■■□□□ 1.52
NUP58-214ENST00000495460 TRAPPC8Q9Y2L5 1435 aa24.51■■□□□ 1.51
NUP58-214ENST00000495460 CEBPAP49715 358 aaPredicted RBP24.49■■□□□ 1.51
NUP58-214ENST00000495460 UHRF1BP1Q6BDS2 1440 aa24.49■■□□□ 1.51
NUP58-214ENST00000495460 ABCA6Q8N139 1617 aa24.48■■□□□ 1.51
NUP58-214ENST00000495460 CNTLNQ9NXG0 1405 aa24.48■■□□□ 1.51
NUP58-214ENST00000495460 ITSN2Q9NZM3 1697 aa24.48■■□□□ 1.51
NUP58-214ENST00000495460 MYT1LQ9UL68 1186 aa24.48■■□□□ 1.51
NUP58-214ENST00000495460 CDC42BPAQ5VT25 1732 aa24.47■■□□□ 1.51
NUP58-214ENST00000495460 KIAA1107Q9UPP5 1409 aa24.45■■□□□ 1.51
NUP58-214ENST00000495460 KIDINS220Q9ULH0 1771 aa24.45■■□□□ 1.5
NUP58-214ENST00000495460 DCAF8L1A6NGE4 600 aa24.44■■□□□ 1.5
NUP58-214ENST00000495460 ESF1Q9H501 851 aaKnown RBP24.44■■□□□ 1.5
NUP58-214ENST00000495460 CACNB1Q02641 598 aaPredicted RBP24.43■■□□□ 1.5
NUP58-214ENST00000495460 GPATCH8Q9UKJ3 1502 aaKnown RBP24.43■■□□□ 1.5
NUP58-214ENST00000495460 STRCQ7RTU9 1775 aa24.43■■□□□ 1.5
NUP58-214ENST00000495460 PTPRTO14522 1441 aa24.42■■□□□ 1.5
NUP58-214ENST00000495460 C3P01024 1663 aa24.41■■□□□ 1.5
NUP58-214ENST00000495460 PLEKHH2Q8IVE3 1493 aa24.41■■□□□ 1.5
NUP58-214ENST00000495460 SAMD9LQ8IVG5 1584 aa24.4■■□□□ 1.5
NUP58-214ENST00000495460 NPATQ14207 1427 aa24.38■■□□□ 1.49
NUP58-214ENST00000495460 SPAG9O60271 1321 aaKnown RBP24.36■■□□□ 1.49
NUP58-214ENST00000495460 MROH2AA6NES4 1674 aa24.35■■□□□ 1.49
NUP58-214ENST00000495460 HOXD11P31277 338 aaPredicted RBP24.35■■□□□ 1.49
NUP58-214ENST00000495460 CFDP1Q9UEE9 299 aaPredicted RBP24.34■■□□□ 1.49
NUP58-214ENST00000495460 HNRNPMP52272 730 aaKnown RBP eCLIP24.31■■□□□ 1.48
NUP58-214ENST00000495460 SYCP2Q9BX26 1530 aa24.3■■□□□ 1.48
NUP58-214ENST00000495460 ZMYM3Q14202 1370 aa24.3■■□□□ 1.48
NUP58-214ENST00000495460 CCNB3Q8WWL7 1395 aa24.3■■□□□ 1.48
NUP58-214ENST00000495460 ZNF777Q9ULD5 760 aaPredicted RBP24.3■■□□□ 1.48
NUP58-214ENST00000495460 ATP7AQ04656 1500 aa24.29■■□□□ 1.48
NUP58-214ENST00000495460 PLXNC1O60486 1568 aa24.29■■□□□ 1.48
NUP58-214ENST00000495460 IQSEC2Q5JU85 1478 aa24.28■■□□□ 1.48
NUP58-214ENST00000495460 NCOA1Q15788 1441 aa24.27■■□□□ 1.48
NUP58-214ENST00000495460 INO80Q9ULG1 1556 aaPredicted RBP24.27■■□□□ 1.48
NUP58-214ENST00000495460 MTUS2Q5JR59 1369 aa24.27■■□□□ 1.48
NUP58-214ENST00000495460 A2MP01023 1474 aa24.26■■□□□ 1.47
NUP58-214ENST00000495460 RTEL1-TNFRSF6BF6WH68 1400 aa24.25■■□□□ 1.47
NUP58-214ENST00000495460 RSPH4AQ5TD94 716 aa24.21■■□□□ 1.47
NUP58-214ENST00000495460 LTBP4Q8N2S1 1624 aa24.21■■□□□ 1.47
NUP58-214ENST00000495460 MBD5Q9P267 1494 aa24.2■■□□□ 1.47
NUP58-214ENST00000495460 CEP162Q5TB80 1403 aa24.2■■□□□ 1.46
NUP58-214ENST00000495460 SUPT6HQ7KZ85 1726 aaKnown RBP24.19■■□□□ 1.46
NUP58-214ENST00000495460 ADGBQ8N7X0 1667 aa24.19■■□□□ 1.46
NUP58-214ENST00000495460 PKD2Q13563 968 aa24.19■■□□□ 1.46
NUP58-214ENST00000495460 PLA2R1Q13018 1463 aa24.18■■□□□ 1.46
NUP58-214ENST00000495460 EHBP1L1Q8N3D4 1523 aa24.17■■□□□ 1.46
NUP58-214ENST00000495460 PTPRKQ15262 1439 aa24.17■■□□□ 1.46
NUP58-214ENST00000495460 CNKSR2Q8WXI2 1034 aa24.16■■□□□ 1.46
NUP58-214ENST00000495460 CAMSAP1Q5T5Y3 1602 aa24.16■■□□□ 1.46
NUP58-214ENST00000495460 TIAM1Q13009 1591 aa24.15■■□□□ 1.46
NUP58-214ENST00000495460 DHX29Q7Z478 1369 aaKnown RBP24.15■■□□□ 1.46
NUP58-214ENST00000495460 ZNF142P52746 1687 aaPredicted RBP24.15■■□□□ 1.46
NUP58-214ENST00000495460 CLTCQ00610 1675 aaKnown RBP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms