RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 UHRF1BP1LA0JNW5 1464 aa24.27■■□□□ 1.48
ATG4B-225ENST00000494465 RRP7BPQ9NSQ0 103 aa24.27■■□□□ 1.48
ATG4B-225ENST00000494465 KDM6BO15054 1643 aa24.26■■□□□ 1.47
ATG4B-225ENST00000494465 ROCK1Q13464 1354 aa24.25■■□□□ 1.47
ATG4B-225ENST00000494465 CROCC2H7BZ55 1655 aa24.23■■□□□ 1.47
ATG4B-225ENST00000494465 ZCCHC11Q5TAX3 1644 aaKnown RBP24.23■■□□□ 1.47
ATG4B-225ENST00000494465 KDM5BQ9UGL1 1544 aa24.21■■□□□ 1.47
ATG4B-225ENST00000494465 CDC42BPBQ9Y5S2 1711 aa24.2■■□□□ 1.46
ATG4B-225ENST00000494465 PREX2Q70Z35 1606 aa24.19■■□□□ 1.46
ATG4B-225ENST00000494465 ZNF777Q9ULD5 760 aaPredicted RBP24.18■■□□□ 1.46
ATG4B-225ENST00000494465 ADGBQ8N7X0 1667 aa24.18■■□□□ 1.46
ATG4B-225ENST00000494465 TTC37Q6PGP7 1564 aa24.17■■□□□ 1.46
ATG4B-225ENST00000494465 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.17■■□□□ 1.46
ATG4B-225ENST00000494465 ZNF316A6NFI3 1004 aaPredicted RBP24.16■■□□□ 1.46
ATG4B-225ENST00000494465 SIN3AQ96ST3 1273 aa24.14■■□□□ 1.46
ATG4B-225ENST00000494465 ADGRL2O95490 1459 aa24.14■■□□□ 1.45
ATG4B-225ENST00000494465 OSCARQ8IYS5 282 aa24.14■■□□□ 1.45
ATG4B-225ENST00000494465 SAMD9LQ8IVG5 1584 aa24.12■■□□□ 1.45
ATG4B-225ENST00000494465 NCOA1Q15788 1441 aa24.12■■□□□ 1.45
ATG4B-225ENST00000494465 DENND4BO75064 1496 aaPredicted RBP24.12■■□□□ 1.45
ATG4B-225ENST00000494465 ARHGEF5Q12774 1597 aa24.09■■□□□ 1.45
ATG4B-225ENST00000494465 MYO5CQ9NQX4 1742 aa24.09■■□□□ 1.45
ATG4B-225ENST00000494465 SHANK2Q9UPX8 1470 aa24.09■■□□□ 1.45
ATG4B-225ENST00000494465 MBD5Q9P267 1494 aa24.08■■□□□ 1.45
ATG4B-225ENST00000494465 NEUROD1Q13562 356 aa24.06■■□□□ 1.44
ATG4B-225ENST00000494465 ARHGAP5Q13017 1502 aa24.03■■□□□ 1.44
ATG4B-225ENST00000494465 TIMELESSQ9UNS1 1208 aa24.03■■□□□ 1.44
ATG4B-225ENST00000494465 C9orf84Q5VXU9 1444 aa24.03■■□□□ 1.44
ATG4B-225ENST00000494465 TRIM52Q96A61 297 aa24.02■■□□□ 1.44
ATG4B-225ENST00000494465 ANKRD30AQ9BXX3 1397 aa24.02■■□□□ 1.44
ATG4B-225ENST00000494465 KCNH8Q96L42 1107 aa24.01■■□□□ 1.43
ATG4B-225ENST00000494465 ACIN1Q9UKV3 1341 aaKnown RBP24.01■■□□□ 1.43
ATG4B-225ENST00000494465 HNRNPMP52272 730 aaKnown RBP eCLIP24.01■■□□□ 1.431e-6■■■■□ 21.8
ATG4B-225ENST00000494465 DIEXFQ68CQ4 756 aaKnown RBP24.01■■□□□ 1.43
ATG4B-225ENST00000494465 MPHOSPH9Q99550 1183 aa23.99■■□□□ 1.43
ATG4B-225ENST00000494465 CCDC141Q6ZP82 1450 aa23.99■■□□□ 1.43
ATG4B-225ENST00000494465 SYCP2Q9BX26 1530 aa23.98■■□□□ 1.43
ATG4B-225ENST00000494465 PLCH2O75038 1416 aa23.97■■□□□ 1.43
ATG4B-225ENST00000494465 WDR7Q9Y4E6 1490 aa23.96■■□□□ 1.43
ATG4B-225ENST00000494465 KIAA1107Q9UPP5 1409 aa23.94■■□□□ 1.42
ATG4B-225ENST00000494465 TSPY4P0CV99 314 aa23.94■■□□□ 1.42
ATG4B-225ENST00000494465 TSPY10P0CW01 314 aa23.94■■□□□ 1.42
ATG4B-225ENST00000494465 ANKRD50Q9ULJ7 1429 aa23.94■■□□□ 1.42
ATG4B-225ENST00000494465 RSPH4AQ5TD94 716 aa23.93■■□□□ 1.42
ATG4B-225ENST00000494465 PZPP20742 1482 aa23.93■■□□□ 1.42
ATG4B-225ENST00000494465 MAST1Q9Y2H9 1570 aa23.92■■□□□ 1.42
ATG4B-225ENST00000494465 PLEKHH2Q8IVE3 1493 aa23.92■■□□□ 1.42
ATG4B-225ENST00000494465 ARHGEF12Q9NZN5 1544 aa23.91■■□□□ 1.42
ATG4B-225ENST00000494465 ARAP3Q8WWN8 1544 aa23.9■■□□□ 1.42
ATG4B-225ENST00000494465 PPP1R15AO75807 674 aaPredicted RBP23.9■■□□□ 1.42
ATG4B-225ENST00000494465 TONSLQ96HA7 1378 aa23.88■■□□□ 1.41
ATG4B-225ENST00000494465 KIF15Q9NS87 1388 aa23.88■■□□□ 1.41
ATG4B-225ENST00000494465 ABCA9Q8IUA7 1624 aa23.88■■□□□ 1.41
ATG4B-225ENST00000494465 ABCC1P33527 1531 aa23.87■■□□□ 1.41
ATG4B-225ENST00000494465 ASXL2Q76L83 1435 aa23.87■■□□□ 1.41
ATG4B-225ENST00000494465 FOXD1Q16676 465 aa23.86■■□□□ 1.41
ATG4B-225ENST00000494465 ANKRD30BQ9BXX2 1392 aa23.86■■□□□ 1.41
ATG4B-225ENST00000494465 EFCAB2Q5VUJ9 269 aa23.85■■□□□ 1.41
ATG4B-225ENST00000494465 SLC4A1APQ9BWU0 796 aaKnown RBP23.84■■□□□ 1.41
ATG4B-225ENST00000494465 PLXNC1O60486 1568 aa23.83■■□□□ 1.41
ATG4B-225ENST00000494465 KDM5DQ9BY66 1539 aa23.82■■□□□ 1.4
ATG4B-225ENST00000494465 RPRD2Q5VT52 1461 aaKnown RBP23.78■■□□□ 1.4
ATG4B-225ENST00000494465 TRAPPC8Q9Y2L5 1435 aa23.78■■□□□ 1.4
ATG4B-225ENST00000494465 FANCAO15360 1455 aa23.75■■□□□ 1.39
ATG4B-225ENST00000494465 NUP155O75694 1391 aa23.75■■□□□ 1.39
ATG4B-225ENST00000494465 NPM1P06748 294 aaKnown RBP eCLIP23.73■■□□□ 1.39
ATG4B-225ENST00000494465 UNC13BO14795 1591 aa23.72■■□□□ 1.39
ATG4B-225ENST00000494465 PKD2Q13563 968 aa23.71■■□□□ 1.39
ATG4B-225ENST00000494465 DUOX2Q9NRD8 1548 aa23.71■■□□□ 1.39
ATG4B-225ENST00000494465 TEX14Q8IWB6 1497 aa23.7■■□□□ 1.38
ATG4B-225ENST00000494465 ZFYVE16Q7Z3T8 1539 aa23.68■■□□□ 1.38
ATG4B-225ENST00000494465 L3MBTL2Q969R5 705 aa23.67■■□□□ 1.38
ATG4B-225ENST00000494465 FAM135AQ9P2D6 1515 aa23.67■■□□□ 1.38
ATG4B-225ENST00000494465 RTEL1-TNFRSF6BF6WH68 1400 aa23.67■■□□□ 1.38
ATG4B-225ENST00000494465 ERBINQ96RT1 1412 aa23.66■■□□□ 1.38
ATG4B-225ENST00000494465 AFAP1Q8N556 730 aa23.65■■□□□ 1.38
ATG4B-225ENST00000494465 RIMBP3CA6NJZ7 1639 aa23.65■■□□□ 1.38
ATG4B-225ENST00000494465 RIMBP3BA6NNM3 1639 aa23.65■■□□□ 1.38
ATG4B-225ENST00000494465 RIMBP3Q9UFD9 1639 aa23.65■■□□□ 1.38
ATG4B-225ENST00000494465 ADGRL1O94910 1474 aa23.64■■□□□ 1.37
ATG4B-225ENST00000494465 INO80Q9ULG1 1556 aaPredicted RBP23.63■■□□□ 1.37
ATG4B-225ENST00000494465 MAGI2Q86UL8 1455 aa23.63■■□□□ 1.37
ATG4B-225ENST00000494465 MIER1Q8N108 512 aa23.63■■□□□ 1.37
ATG4B-225ENST00000494465 SPAG9O60271 1321 aaKnown RBP23.62■■□□□ 1.37
ATG4B-225ENST00000494465 IQGAP3Q86VI3 1631 aa23.62■■□□□ 1.37
ATG4B-225ENST00000494465 SCAPERQ9BY12 1400 aa23.61■■□□□ 1.37
ATG4B-225ENST00000494465 ATP7AQ04656 1500 aa23.59■■□□□ 1.37
ATG4B-225ENST00000494465 CD109Q6YHK3 1445 aa23.59■■□□□ 1.37
ATG4B-225ENST00000494465 CFAP74Q9C0B2 1584 aa23.57■■□□□ 1.36
ATG4B-225ENST00000494465 CYB5RLQ6IPT4 315 aa23.55■■□□□ 1.36
ATG4B-225ENST00000494465 HIRIP3Q9BW71 556 aaPredicted RBP23.54■■□□□ 1.36
ATG4B-225ENST00000494465 NBPF8Q3BBV2 869 aa23.52■■□□□ 1.36
ATG4B-225ENST00000494465 KIDINS220Q9ULH0 1771 aa23.52■■□□□ 1.35
ATG4B-225ENST00000494465 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.51■■□□□ 1.356e-14■■□□□ 12
ATG4B-225ENST00000494465 DEPDC5O75140 1603 aa23.51■■□□□ 1.35
ATG4B-225ENST00000494465 ZNF518AQ6AHZ1 1483 aa23.5■■□□□ 1.35
ATG4B-225ENST00000494465 PLA2R1Q13018 1463 aa23.49■■□□□ 1.35
ATG4B-225ENST00000494465 KDM5CP41229 1560 aa23.48■■□□□ 1.35
ATG4B-225ENST00000494465 MAP3K4Q9Y6R4 1608 aa23.47■■□□□ 1.35
ATG4B-225ENST00000494465 POGZQ7Z3K3 1410 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms