RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 NCBP3Q53F19 620 aaKnown RBP10.24□□□□□ -0.77
MSH5-217ENST00000494458 GPATCH8Q9UKJ3 1502 aaKnown RBP10.23□□□□□ -0.77
MSH5-217ENST00000494458 U3KPZ7 1027 aaPredicted RBP10.23□□□□□ -0.77
MSH5-217ENST00000494458 PTPRKQ15262 1439 aa10.23□□□□□ -0.77
MSH5-217ENST00000494458 SPINK5Q9NQ38 1064 aaPredicted RBP10.22□□□□□ -0.77
MSH5-217ENST00000494458 PTPN23Q9H3S7 1636 aa10.22□□□□□ -0.77
MSH5-217ENST00000494458 CLSPNQ9HAW4 1339 aa10.21□□□□□ -0.78
MSH5-217ENST00000494458 AKNAQ7Z591 1439 aa10.21□□□□□ -0.78
MSH5-217ENST00000494458 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.2□□□□□ -0.78
MSH5-217ENST00000494458 SETD5Q9C0A6 1442 aa10.2□□□□□ -0.78
MSH5-217ENST00000494458 KIF14Q15058 1648 aa10.19□□□□□ -0.78
MSH5-217ENST00000494458 HFM1A2PYH4 1435 aa10.19□□□□□ -0.78
MSH5-217ENST00000494458 ARID3CA6NKF2 412 aa10.18□□□□□ -0.78
MSH5-217ENST00000494458 FAM50AQ14320 339 aaKnown RBP10.18□□□□□ -0.78
MSH5-217ENST00000494458 ROCK1Q13464 1354 aa10.17□□□□□ -0.78
MSH5-217ENST00000494458 DHX57Q6P158 1386 aaKnown RBP10.17□□□□□ -0.78
MSH5-217ENST00000494458 ABCC5O15440 1437 aa10.16□□□□□ -0.78
MSH5-217ENST00000494458 RAB3GAP2Q9H2M9 1393 aa10.16□□□□□ -0.78
MSH5-217ENST00000494458 NPM3O75607 178 aaKnown RBP10.16□□□□□ -0.78
MSH5-217ENST00000494458 CAPN15O75808 1086 aa10.16□□□□□ -0.78
MSH5-217ENST00000494458 NAIPQ13075 1403 aa10.16□□□□□ -0.78
MSH5-217ENST00000494458 ZCCHC11Q5TAX3 1644 aaKnown RBP10.15□□□□□ -0.78
MSH5-217ENST00000494458 CCER1Q8TC90 406 aaPredicted RBP10.15□□□□□ -0.78
MSH5-217ENST00000494458 ITSN2Q9NZM3 1697 aa10.15□□□□□ -0.79
MSH5-217ENST00000494458 ACIN1Q9UKV3 1341 aaKnown RBP10.14□□□□□ -0.79
MSH5-217ENST00000494458 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.14□□□□□ -0.79
MSH5-217ENST00000494458 CFDP1Q9UEE9 299 aaPredicted RBP10.14□□□□□ -0.79
MSH5-217ENST00000494458 DAPK1P53355 1430 aa10.14□□□□□ -0.79
MSH5-217ENST00000494458 DNMT1P26358 1616 aaKnown RBP10.14□□□□□ -0.79
MSH5-217ENST00000494458 CDC42BPAQ5VT25 1732 aa10.13□□□□□ -0.79
MSH5-217ENST00000494458 ARAP3Q8WWN8 1544 aa10.13□□□□□ -0.79
MSH5-217ENST00000494458 ZNF644Q9H582 1327 aaPredicted RBP10.13□□□□□ -0.79
MSH5-217ENST00000494458 MBD5Q9P267 1494 aa10.13□□□□□ -0.79
MSH5-217ENST00000494458 RSPH4AQ5TD94 716 aa10.13□□□□□ -0.79
MSH5-217ENST00000494458 PLCH2O75038 1416 aa10.13□□□□□ -0.79
MSH5-217ENST00000494458 ADGRL2O95490 1459 aa10.12□□□□□ -0.79
MSH5-217ENST00000494458 CAMSAP2Q08AD1 1489 aa10.12□□□□□ -0.79
MSH5-217ENST00000494458 KIAA1107Q9UPP5 1409 aa10.12□□□□□ -0.79
MSH5-217ENST00000494458 WDR7Q9Y4E6 1490 aa10.11□□□□□ -0.79
MSH5-217ENST00000494458 ARHGEF5Q12774 1597 aa10.11□□□□□ -0.79
MSH5-217ENST00000494458 ITGAEP38570 1179 aa10.11□□□□□ -0.79
MSH5-217ENST00000494458 PREX2Q70Z35 1606 aa10.11□□□□□ -0.79
MSH5-217ENST00000494458 SHANK2Q9UPX8 1470 aa10.1□□□□□ -0.79
MSH5-217ENST00000494458 NCOA1Q15788 1441 aa10.1□□□□□ -0.79
MSH5-217ENST00000494458 CDC42BPBQ9Y5S2 1711 aa10.1□□□□□ -0.79
MSH5-217ENST00000494458 TTC37Q6PGP7 1564 aa10.09□□□□□ -0.79
MSH5-217ENST00000494458 PLEKHH2Q8IVE3 1493 aa10.08□□□□□ -0.8
MSH5-217ENST00000494458 ASXL2Q76L83 1435 aa10.07□□□□□ -0.8
MSH5-217ENST00000494458 ABCA9Q8IUA7 1624 aa10.07□□□□□ -0.8
MSH5-217ENST00000494458 GCC2Q8IWJ2 1684 aa10.07□□□□□ -0.8
MSH5-217ENST00000494458 SAMD9LQ8IVG5 1584 aa10.07□□□□□ -0.8
MSH5-217ENST00000494458 MAPKBP1O60336 1514 aa10.07□□□□□ -0.8
MSH5-217ENST00000494458 EFCAB2Q5VUJ9 269 aa10.05□□□□□ -0.8
MSH5-217ENST00000494458 CROCC2H7BZ55 1655 aa10.05□□□□□ -0.8
MSH5-217ENST00000494458 MAST1Q9Y2H9 1570 aa10.05□□□□□ -0.8
MSH5-217ENST00000494458 TIMELESSQ9UNS1 1208 aa10.04□□□□□ -0.8
MSH5-217ENST00000494458 MYO5CQ9NQX4 1742 aa10.04□□□□□ -0.8
MSH5-217ENST00000494458 DENND4BO75064 1496 aaPredicted RBP10.04□□□□□ -0.8
MSH5-217ENST00000494458 CCDC141Q6ZP82 1450 aa10.04□□□□□ -0.8
MSH5-217ENST00000494458 RIMBP3CA6NJZ7 1639 aa10.04□□□□□ -0.8
MSH5-217ENST00000494458 RIMBP3BA6NNM3 1639 aa10.04□□□□□ -0.8
MSH5-217ENST00000494458 RIMBP3Q9UFD9 1639 aa10.04□□□□□ -0.8
MSH5-217ENST00000494458 ANKRD30AQ9BXX3 1397 aa10.03□□□□□ -0.8
MSH5-217ENST00000494458 ARHGEF12Q9NZN5 1544 aa10.03□□□□□ -0.8
MSH5-217ENST00000494458 KCNH8Q96L42 1107 aa10.03□□□□□ -0.8
MSH5-217ENST00000494458 RRP7BPQ9NSQ0 103 aa10.03□□□□□ -0.8
MSH5-217ENST00000494458 CHIC2Q9UKJ5 165 aa10.03□□□□□ -0.8
MSH5-217ENST00000494458 C9orf84Q5VXU9 1444 aa10.02□□□□□ -0.81
MSH5-217ENST00000494458 NPM1P06748 294 aaKnown RBP eCLIP10.02□□□□□ -0.81
MSH5-217ENST00000494458 HNRNPMP52272 730 aaKnown RBP eCLIP10.02□□□□□ -0.81
MSH5-217ENST00000494458 ARHGAP5Q13017 1502 aa10.02□□□□□ -0.81
MSH5-217ENST00000494458 RTEL1-TNFRSF6BF6WH68 1400 aa10.01□□□□□ -0.81
MSH5-217ENST00000494458 KDM6BO15054 1643 aa10.01□□□□□ -0.81
MSH5-217ENST00000494458 TSPY4P0CV99 314 aa10.01□□□□□ -0.81
MSH5-217ENST00000494458 TSPY10P0CW01 314 aa10.01□□□□□ -0.81
MSH5-217ENST00000494458 ZNF777Q9ULD5 760 aaPredicted RBP10.01□□□□□ -0.81
MSH5-217ENST00000494458 ADGBQ8N7X0 1667 aa10.01□□□□□ -0.81
MSH5-217ENST00000494458 ABCC1P33527 1531 aa10.01□□□□□ -0.81
MSH5-217ENST00000494458 SYCP2Q9BX26 1530 aa9.99□□□□□ -0.81
MSH5-217ENST00000494458 GLI2P10070 1586 aa9.99□□□□□ -0.81
MSH5-217ENST00000494458 ANKRD50Q9ULJ7 1429 aa9.99□□□□□ -0.81
MSH5-217ENST00000494458 TRAPPC8Q9Y2L5 1435 aa9.98□□□□□ -0.81
MSH5-217ENST00000494458 FANCAO15360 1455 aa9.98□□□□□ -0.81
MSH5-217ENST00000494458 KDM5DQ9BY66 1539 aa9.97□□□□□ -0.81
MSH5-217ENST00000494458 PLXNC1O60486 1568 aa9.97□□□□□ -0.81
MSH5-217ENST00000494458 CYB5RLQ6IPT4 315 aa9.97□□□□□ -0.81
MSH5-217ENST00000494458 MPHOSPH9Q99550 1183 aa9.97□□□□□ -0.81
MSH5-217ENST00000494458 KIF15Q9NS87 1388 aa9.96□□□□□ -0.82
MSH5-217ENST00000494458 CD109Q6YHK3 1445 aa9.96□□□□□ -0.82
MSH5-217ENST00000494458 PZPP20742 1482 aa9.96□□□□□ -0.82
MSH5-217ENST00000494458 ANKRD30BQ9BXX2 1392 aa9.95□□□□□ -0.82
MSH5-217ENST00000494458 NEO1Q92859 1461 aa9.95□□□□□ -0.82
MSH5-217ENST00000494458 DUOX2Q9NRD8 1548 aa9.93□□□□□ -0.82
MSH5-217ENST00000494458 ERBINQ96RT1 1412 aa9.93□□□□□ -0.82
MSH5-217ENST00000494458 MAP3K4Q9Y6R4 1608 aa9.93□□□□□ -0.82
MSH5-217ENST00000494458 MAGI2Q86UL8 1455 aa9.92□□□□□ -0.82
MSH5-217ENST00000494458 SCAPERQ9BY12 1400 aa9.92□□□□□ -0.82
MSH5-217ENST00000494458 AFAP1Q8N556 730 aa9.92□□□□□ -0.82
MSH5-217ENST00000494458 ADGRL1O94910 1474 aa9.91□□□□□ -0.82
MSH5-217ENST00000494458 PPP1R15AO75807 674 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms