RNA–Protein interactions for RNA: ENST00000493540.1

CAB39-206, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-206ENST00000493540 ARAP3Q8WWN8 1544 aa12.27□□□□□ -0.45
CAB39-206ENST00000493540 HECW2Q9P2P5 1572 aa12.26□□□□□ -0.45
CAB39-206ENST00000493540 ADAMTSL3P82987 1691 aa12.26□□□□□ -0.45
CAB39-206ENST00000493540 RICTORQ6R327 1708 aa12.25□□□□□ -0.45
CAB39-206ENST00000493540 BCORL1Q5H9F3 1711 aa12.2□□□□□ -0.46
CAB39-206ENST00000493540 CHRDL2Q6WN34 429 aa12.2□□□□□ -0.46
CAB39-206ENST00000493540 SPDYE2BA6NHP3 402 aa12.19□□□□□ -0.46
CAB39-206ENST00000493540 SPDYE6P0CI01 402 aa12.19□□□□□ -0.46
CAB39-206ENST00000493540 SPDYE2Q495Y8 402 aa12.19□□□□□ -0.46
CAB39-206ENST00000493540 ATP10BO94823 1461 aa12.19□□□□□ -0.46
CAB39-206ENST00000493540 CD109Q6YHK3 1445 aa12.19□□□□□ -0.46
CAB39-206ENST00000493540 SIGLEC1Q9BZZ2 1709 aa12.17□□□□□ -0.46
CAB39-206ENST00000493540 ARHGEF40Q8TER5 1519 aa12.17□□□□□ -0.46
CAB39-206ENST00000493540 NUP153P49790 1475 aaKnown RBP12.17□□□□□ -0.46
CAB39-206ENST00000493540 ZNF692Q9BU19 519 aaPredicted RBP12.17□□□□□ -0.46
CAB39-206ENST00000493540 CFAP74Q9C0B2 1584 aa12.17□□□□□ -0.46
CAB39-206ENST00000493540 EFCAB5A4FU69 1503 aa12.16□□□□□ -0.46
CAB39-206ENST00000493540 NEO1Q92859 1461 aa12.15□□□□□ -0.46
CAB39-206ENST00000493540 ZMYM4Q5VZL5 1548 aa12.15□□□□□ -0.46
CAB39-206ENST00000493540 LRRIQ1Q96JM4 1722 aa12.14□□□□□ -0.47
CAB39-206ENST00000493540 TTC37Q6PGP7 1564 aa12.13□□□□□ -0.47
CAB39-206ENST00000493540 EEA1Q15075 1411 aa12.13□□□□□ -0.47
CAB39-206ENST00000493540 MADDQ8WXG6 1647 aa12.12□□□□□ -0.47
CAB39-206ENST00000493540 PROM2Q8N271 834 aa12.12□□□□□ -0.47
CAB39-206ENST00000493540 PHLDB1Q86UU1 1377 aa12.12□□□□□ -0.47
CAB39-206ENST00000493540 TTBK1Q5TCY1 1321 aaPredicted RBP12.11□□□□□ -0.47
CAB39-206ENST00000493540 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.1□□□□□ -0.47
CAB39-206ENST00000493540 MYO5CQ9NQX4 1742 aa12.09□□□□□ -0.47
CAB39-206ENST00000493540 SSUH2Q9Y2M2 353 aa12.09□□□□□ -0.47
CAB39-206ENST00000493540 RIMS1Q86UR5 1692 aaKnown RBP12.07□□□□□ -0.48
CAB39-206ENST00000493540 FER1L4A9Z1Z3 1794 aa12.07□□□□□ -0.48
CAB39-206ENST00000493540 PTPRMP28827 1452 aa12.06□□□□□ -0.48
CAB39-206ENST00000493540 PCF11O94913 1555 aaKnown RBP12.05□□□□□ -0.48
CAB39-206ENST00000493540 FHOD3Q2V2M9 1422 aa12.04□□□□□ -0.48
CAB39-206ENST00000493540 HECW1Q76N89 1606 aa12.04□□□□□ -0.48
CAB39-206ENST00000493540 LMTK3Q96Q04 1460 aa12.02□□□□□ -0.48
CAB39-206ENST00000493540 SP7Q8TDD2 431 aaPredicted RBP12.02□□□□□ -0.49
CAB39-206ENST00000493540 FBXO3Q9UK99 471 aa12.02□□□□□ -0.49
CAB39-206ENST00000493540 CDC42BPBQ9Y5S2 1711 aa12.02□□□□□ -0.49
CAB39-206ENST00000493540 KDM5CP41229 1560 aa12.01□□□□□ -0.49
CAB39-206ENST00000493540 CDK13Q14004 1512 aaKnown RBP12.01□□□□□ -0.49
CAB39-206ENST00000493540 KIF14Q15058 1648 aa12□□□□□ -0.49
CAB39-206ENST00000493540 FANCAO15360 1455 aa12□□□□□ -0.49
CAB39-206ENST00000493540 MAGI2Q86UL8 1455 aa11.99□□□□□ -0.49
CAB39-206ENST00000493540 ZFYVE16Q7Z3T8 1539 aa11.99□□□□□ -0.49
CAB39-206ENST00000493540 REREQ9P2R6 1566 aa11.99□□□□□ -0.49
CAB39-206ENST00000493540 PREX1Q8TCU6 1659 aa11.99□□□□□ -0.49
CAB39-206ENST00000493540 PREX2Q70Z35 1606 aa11.98□□□□□ -0.49
CAB39-206ENST00000493540 ILDR1Q86SU0 546 aaPredicted RBP11.98□□□□□ -0.49
CAB39-206ENST00000493540 DENND4BO75064 1496 aaPredicted RBP11.97□□□□□ -0.49
CAB39-206ENST00000493540 CDC42BPAQ5VT25 1732 aa11.97□□□□□ -0.49
CAB39-206ENST00000493540 ITSN2Q9NZM3 1697 aa11.97□□□□□ -0.49
CAB39-206ENST00000493540 ARHGEF12Q9NZN5 1544 aa11.96□□□□□ -0.49
CAB39-206ENST00000493540 POGZQ7Z3K3 1410 aa11.96□□□□□ -0.49
CAB39-206ENST00000493540 AKNAQ7Z591 1439 aa11.96□□□□□ -0.49
CAB39-206ENST00000493540 KCNH8Q96L42 1107 aa11.96□□□□□ -0.49
CAB39-206ENST00000493540 SETD1BQ9UPS6 1966 aaKnown RBP11.96□□□□□ -0.5
CAB39-206ENST00000493540 ARHGAP35Q9NRY4 1499 aa11.95□□□□□ -0.5
CAB39-206ENST00000493540 AKT1S1Q96B36 256 aa11.94□□□□□ -0.5
CAB39-206ENST00000493540 ABCA6Q8N139 1617 aa11.93□□□□□ -0.5
CAB39-206ENST00000493540 DIP2CQ9Y2E4 1556 aa11.93□□□□□ -0.5
CAB39-206ENST00000493540 STRCQ7RTU9 1775 aa11.93□□□□□ -0.5
CAB39-206ENST00000493540 YEATS2Q9ULM3 1422 aa11.93□□□□□ -0.5
CAB39-206ENST00000493540 PLCH2O75038 1416 aa11.92□□□□□ -0.5
CAB39-206ENST00000493540 RAPGEF3O95398 923 aa11.91□□□□□ -0.5
CAB39-206ENST00000493540 KIDINS220Q9ULH0 1771 aa11.9□□□□□ -0.5
CAB39-206ENST00000493540 FMN1Q68DA7 1419 aa11.9□□□□□ -0.5
CAB39-206ENST00000493540 P3H3Q8IVL6 736 aa11.9□□□□□ -0.5
CAB39-206ENST00000493540 C3P01024 1663 aa11.9□□□□□ -0.5
CAB39-206ENST00000493540 ABCC1P33527 1531 aa11.9□□□□□ -0.5
CAB39-206ENST00000493540 MROH2AA6NES4 1674 aa11.89□□□□□ -0.51
CAB39-206ENST00000493540 ZNF518AQ6AHZ1 1483 aa11.88□□□□□ -0.51
CAB39-206ENST00000493540 ARID3CA6NKF2 412 aa11.87□□□□□ -0.51
CAB39-206ENST00000493540 STAG3Q9UJ98 1225 aa11.87□□□□□ -0.51
CAB39-206ENST00000493540 TROQ12816 1431 aaPredicted RBP11.86□□□□□ -0.51
CAB39-206ENST00000493540 C9orf84Q5VXU9 1444 aa11.86□□□□□ -0.51
CAB39-206ENST00000493540 AGLP35573 1532 aa11.86□□□□□ -0.51
CAB39-206ENST00000493540 ZNF142P52746 1687 aaPredicted RBP11.84□□□□□ -0.51
CAB39-206ENST00000493540 ATP10AO60312 1499 aa11.84□□□□□ -0.51
CAB39-206ENST00000493540 INO80Q9ULG1 1556 aaPredicted RBP11.84□□□□□ -0.51
CAB39-206ENST00000493540 CCDC18Q5T9S5 1454 aa11.83□□□□□ -0.52
CAB39-206ENST00000493540 MLH3Q9UHC1 1453 aa11.83□□□□□ -0.52
CAB39-206ENST00000493540 SCAPERQ9BY12 1400 aa11.83□□□□□ -0.52
CAB39-206ENST00000493540 PLXNC1O60486 1568 aa11.83□□□□□ -0.52
CAB39-206ENST00000493540 PLEKHD1A6NEE1 506 aa11.82□□□□□ -0.52
CAB39-206ENST00000493540 FAM9AQ8IZU1 332 aaPredicted RBP11.82□□□□□ -0.52
CAB39-206ENST00000493540 SAMD9LQ8IVG5 1584 aa11.82□□□□□ -0.52
CAB39-206ENST00000493540 FYCO1Q9BQS8 1478 aa11.82□□□□□ -0.52
CAB39-206ENST00000493540 ARHGAP5Q13017 1502 aa11.81□□□□□ -0.52
CAB39-206ENST00000493540 VASPP50552 380 aaPredicted RBP11.81□□□□□ -0.52
CAB39-206ENST00000493540 REM2Q8IYK8 340 aaPredicted RBP11.81□□□□□ -0.52
CAB39-206ENST00000493540 CASKIN1Q8WXD9 1431 aa11.8□□□□□ -0.52
CAB39-206ENST00000493540 PIP4P2Q8N4L2 257 aa11.8□□□□□ -0.52
CAB39-206ENST00000493540 SPDYE1Q8NFV5 336 aaPredicted RBP11.79□□□□□ -0.52
CAB39-206ENST00000493540 FBXO41Q8TF61 875 aa11.78□□□□□ -0.52
CAB39-206ENST00000493540 ADGBQ8N7X0 1667 aa11.78□□□□□ -0.52
CAB39-206ENST00000493540 HAX1O00165 279 aa11.77□□□□□ -0.53
CAB39-206ENST00000493540 CLIP1P30622 1438 aa11.77□□□□□ -0.53
CAB39-206ENST00000493540 SUPT6HQ7KZ85 1726 aaKnown RBP11.76□□□□□ -0.53
CAB39-206ENST00000493540 MYO3AQ8NEV4 1616 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms