RNA–Protein interactions for RNA: ENST00000493518.5

CACUL1-206, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-206ENST00000493518 FANCIQ9NVI1 1328 aa21.13■□□□□ 0.97
CACUL1-206ENST00000493518 PDS5BQ9NTI5 1447 aa21.13■□□□□ 0.97
CACUL1-206ENST00000493518 URB2Q14146 1524 aaKnown RBP21.12■□□□□ 0.97
CACUL1-206ENST00000493518 ZBED9Q6R2W3 1325 aa21.12■□□□□ 0.97
CACUL1-206ENST00000493518 RGL3Q3MIN7 710 aa21.1■□□□□ 0.97
CACUL1-206ENST00000493518 DENND4BO75064 1496 aaPredicted RBP21.09■□□□□ 0.97
CACUL1-206ENST00000493518 DEKP35659 375 aaKnown RBP21.08■□□□□ 0.97
CACUL1-206ENST00000493518 GRIN2BQ13224 1484 aa21.08■□□□□ 0.97
CACUL1-206ENST00000493518 CARD11Q9BXL7 1154 aa21.08■□□□□ 0.97
CACUL1-206ENST00000493518 KDM5BQ9UGL1 1544 aa21.08■□□□□ 0.96
CACUL1-206ENST00000493518 NOP58Q9Y2X3 529 aaKnown RBP21.06■□□□□ 0.96
CACUL1-206ENST00000493518 SUPT6HQ7KZ85 1726 aaKnown RBP21.05■□□□□ 0.96
CACUL1-206ENST00000493518 SKAP1Q86WV1 359 aa21.04■□□□□ 0.96
CACUL1-206ENST00000493518 DCAF11Q8TEB1 546 aa21.03■□□□□ 0.96
CACUL1-206ENST00000493518 NCOA1Q15788 1441 aa21.02■□□□□ 0.96
CACUL1-206ENST00000493518 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.02■□□□□ 0.965e-8■□□□□ 10.8
CACUL1-206ENST00000493518 ANKRD30BQ9BXX2 1392 aa21.02■□□□□ 0.96
CACUL1-206ENST00000493518 ST20-MTHFSA0A0A6YYL1 179 aa21.02■□□□□ 0.95
CACUL1-206ENST00000493518 EHBP1L1Q8N3D4 1523 aa21.01■□□□□ 0.95
CACUL1-206ENST00000493518 CTTNBP2Q8WZ74 1663 aa21.01■□□□□ 0.95
CACUL1-206ENST00000493518 ANP32AP39687 249 aaKnown RBP21.01■□□□□ 0.95
CACUL1-206ENST00000493518 NUDCQ9Y266 331 aa21.01■□□□□ 0.95
CACUL1-206ENST00000493518 USP47Q96K76 1375 aa21.01■□□□□ 0.95
CACUL1-206ENST00000493518 EPRSP07814 1512 aaKnown RBP21■□□□□ 0.95
CACUL1-206ENST00000493518 LRRIQ1Q96JM4 1722 aa21■□□□□ 0.95
CACUL1-206ENST00000493518 PRDM2Q13029 1718 aa20.99■□□□□ 0.95
CACUL1-206ENST00000493518 UGGT2Q9NYU1 1516 aa20.99■□□□□ 0.95
CACUL1-206ENST00000493518 LAS1LQ9Y4W2 734 aaKnown RBP20.98■□□□□ 0.95
CACUL1-206ENST00000493518 THOC2Q8NI27 1593 aaKnown RBP20.98■□□□□ 0.95
CACUL1-206ENST00000493518 CUL7Q14999 1698 aa20.97■□□□□ 0.95
CACUL1-206ENST00000493518 CC2D1BQ5T0F9 858 aaKnown RBP20.97■□□□□ 0.95
CACUL1-206ENST00000493518 PLIN1O60240 522 aa20.97■□□□□ 0.95
CACUL1-206ENST00000493518 EXOC6Q8TAG9 804 aa20.96■□□□□ 0.95
CACUL1-206ENST00000493518 ZBTB47Q9UFB7 747 aaPredicted RBP20.95■□□□□ 0.94
CACUL1-206ENST00000493518 RTL5Q5HYW3 569 aaPredicted RBP20.94■□□□□ 0.94
CACUL1-206ENST00000493518 PRG4Q92954 1404 aaPredicted RBP20.94■□□□□ 0.94
CACUL1-206ENST00000493518 ABCC5O15440 1437 aa20.93■□□□□ 0.94
CACUL1-206ENST00000493518 DAPK1P53355 1430 aa20.93■□□□□ 0.94
CACUL1-206ENST00000493518 CHMP7Q8WUX9 453 aaPredicted RBP20.93■□□□□ 0.94
CACUL1-206ENST00000493518 ERICH6BQ5W0A0 696 aa20.92■□□□□ 0.94
CACUL1-206ENST00000493518 NUP155O75694 1391 aa20.92■□□□□ 0.94
CACUL1-206ENST00000493518 HNRNPMP52272 730 aaKnown RBP eCLIP20.91■□□□□ 0.94
CACUL1-206ENST00000493518 CDCA7LQ96GN5 454 aa20.91■□□□□ 0.94
CACUL1-206ENST00000493518 PNISRQ8TF01 805 aaKnown RBP20.9■□□□□ 0.94
CACUL1-206ENST00000493518 RTN4Q9NQC3 1192 aaKnown RBP20.9■□□□□ 0.94
CACUL1-206ENST00000493518 RPRD2Q5VT52 1461 aaKnown RBP20.89■□□□□ 0.93
CACUL1-206ENST00000493518 SAMD9Q5K651 1589 aa20.86■□□□□ 0.93
CACUL1-206ENST00000493518 TSPY4P0CV99 314 aa20.86■□□□□ 0.93
CACUL1-206ENST00000493518 TSPY10P0CW01 314 aa20.86■□□□□ 0.93
CACUL1-206ENST00000493518 LAMC3Q9Y6N6 1575 aa20.85■□□□□ 0.93
CACUL1-206ENST00000493518 DHX29Q7Z478 1369 aaKnown RBP20.83■□□□□ 0.93
CACUL1-206ENST00000493518 NBPF1Q3BBV0 1214 aa20.83■□□□□ 0.92
CACUL1-206ENST00000493518 IPO9Q96P70 1041 aaKnown RBP20.83■□□□□ 0.92
CACUL1-206ENST00000493518 RCAN3Q9UKA8 241 aa20.82■□□□□ 0.92
CACUL1-206ENST00000493518 MIA2Q96PC5 1412 aa20.82■□□□□ 0.92
CACUL1-206ENST00000493518 TEX14Q8IWB6 1497 aa20.82■□□□□ 0.92
CACUL1-206ENST00000493518 ZNF608Q9ULD9 1512 aaPredicted RBP20.81■□□□□ 0.92
CACUL1-206ENST00000493518 PLEKHD1A6NEE1 506 aa20.81■□□□□ 0.92
CACUL1-206ENST00000493518 SPATA31E1Q6ZUB1 1445 aa20.8■□□□□ 0.92
CACUL1-206ENST00000493518 HECW1Q76N89 1606 aa20.8■□□□□ 0.92
CACUL1-206ENST00000493518 TCOF1Q13428 1488 aaKnown RBP20.8■□□□□ 0.92
CACUL1-206ENST00000493518 SLC4A3P48751 1232 aa20.78■□□□□ 0.92
CACUL1-206ENST00000493518 SMG6Q86US8 1419 aaKnown RBP20.78■□□□□ 0.92
CACUL1-206ENST00000493518 IQGAP2Q13576 1575 aa20.78■□□□□ 0.92
CACUL1-206ENST00000493518 RRP1P56182 461 aaKnown RBP20.78■□□□□ 0.92
CACUL1-206ENST00000493518 ROCK2O75116 1388 aaKnown RBP20.77■□□□□ 0.92
CACUL1-206ENST00000493518 PLB1Q6P1J6 1458 aa20.76■□□□□ 0.91
CACUL1-206ENST00000493518 ABCA5Q8WWZ7 1642 aa20.76■□□□□ 0.91
CACUL1-206ENST00000493518 ARHGEF11O15085 1522 aa20.74■□□□□ 0.91
CACUL1-206ENST00000493518 ANKRD50Q9ULJ7 1429 aa20.73■□□□□ 0.91
CACUL1-206ENST00000493518 ANKRD30AQ9BXX3 1397 aa20.73■□□□□ 0.91
CACUL1-206ENST00000493518 NEFMP07197 916 aa20.72■□□□□ 0.91
CACUL1-206ENST00000493518 KIAA1107Q9UPP5 1409 aa20.72■□□□□ 0.91
CACUL1-206ENST00000493518 PZPP20742 1482 aa20.72■□□□□ 0.91
CACUL1-206ENST00000493518 MYBBP1AQ9BQG0 1328 aaKnown RBP20.71■□□□□ 0.91
CACUL1-206ENST00000493518 PDE4AP27815 886 aa20.71■□□□□ 0.91
CACUL1-206ENST00000493518 NUP153P49790 1475 aaKnown RBP20.71■□□□□ 0.91
CACUL1-206ENST00000493518 JPH4Q96JJ6 628 aa20.71■□□□□ 0.91
CACUL1-206ENST00000493518 GCC2Q8IWJ2 1684 aa20.7■□□□□ 0.9
CACUL1-206ENST00000493518 ROCK1Q13464 1354 aa20.69■□□□□ 0.9
CACUL1-206ENST00000493518 KIF15Q9NS87 1388 aa20.69■□□□□ 0.9
CACUL1-206ENST00000493518 CRBNQ96SW2 442 aa20.69■□□□□ 0.9
CACUL1-206ENST00000493518 PANK3Q9H999 370 aa20.68■□□□□ 0.9
CACUL1-206ENST00000493518 CAMSAP2Q08AD1 1489 aa20.68■□□□□ 0.9
CACUL1-206ENST00000493518 WDR62O43379 1518 aa20.68■□□□□ 0.9
CACUL1-206ENST00000493518 C20orf194Q5TEA3 1177 aa20.67■□□□□ 0.9
CACUL1-206ENST00000493518 KIF21AQ7Z4S6 1674 aa20.67■□□□□ 0.9
CACUL1-206ENST00000493518 SENP3Q9H4L4 574 aaPredicted RBP20.66■□□□□ 0.9
CACUL1-206ENST00000493518 IL27Q8NEV9 243 aa20.66■□□□□ 0.9
CACUL1-206ENST00000493518 BCORL1Q5H9F3 1711 aa20.66■□□□□ 0.9
CACUL1-206ENST00000493518 NLRP13Q86W25 1043 aa20.65■□□□□ 0.9
CACUL1-206ENST00000493518 RGS3P49796 1198 aa20.65■□□□□ 0.9
CACUL1-206ENST00000493518 MYT1LQ9UL68 1186 aa20.65■□□□□ 0.9
CACUL1-206ENST00000493518 RALBP1Q15311 655 aa20.64■□□□□ 0.89
CACUL1-206ENST00000493518 KTN1Q86UP2 1357 aaKnown RBP20.63■□□□□ 0.89
CACUL1-206ENST00000493518 CCDC146Q8IYE0 955 aa20.62■□□□□ 0.89
CACUL1-206ENST00000493518 TROQ12816 1431 aaPredicted RBP20.61■□□□□ 0.89
CACUL1-206ENST00000493518 GPATCH8Q9UKJ3 1502 aaKnown RBP20.61■□□□□ 0.89
CACUL1-206ENST00000493518 DAXXQ9UER7 740 aaPredicted RBP20.61■□□□□ 0.89
CACUL1-206ENST00000493518 DISP1Q96F81 1524 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms