RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 MFRPQ9BY79 579 aa5.59□□□□□ -1.51
SNX13-209ENST00000492626 PRDM2Q13029 1718 aa5.59□□□□□ -1.51
SNX13-209ENST00000492626 PRKAR2AP13861 404 aaKnown RBP5.59□□□□□ -1.51
SNX13-209ENST00000492626 EFCAB3Q8N7B9 438 aa5.58□□□□□ -1.52
SNX13-209ENST00000492626 ZC3H15Q8WU90 426 aaKnown RBP5.58□□□□□ -1.52
SNX13-209ENST00000492626 BRPF1P55201 1214 aaPredicted RBP5.57□□□□□ -1.52
SNX13-209ENST00000492626 MKRN3Q13064 507 aaKnown RBP5.57□□□□□ -1.52
SNX13-209ENST00000492626 PHF8Q9UPP1 1060 aa5.57□□□□□ -1.52
SNX13-209ENST00000492626 SEMA3EO15041 775 aa5.56□□□□□ -1.52
SNX13-209ENST00000492626 DDX27Q96GQ7 796 aaKnown RBP5.56□□□□□ -1.52
SNX13-209ENST00000492626 SLC24A3Q9HC58 644 aa5.56□□□□□ -1.52
SNX13-209ENST00000492626 TESPA1A2RU30 521 aaPredicted RBP5.55□□□□□ -1.52
SNX13-209ENST00000492626 CCDC61Q9Y6R9 512 aa5.55□□□□□ -1.52
SNX13-209ENST00000492626 NESP48681 1621 aa5.55□□□□□ -1.52
SNX13-209ENST00000492626 IFNL1Q8IU54 200 aa5.54□□□□□ -1.52
SNX13-209ENST00000492626 KDM6BO15054 1643 aa5.53□□□□□ -1.52
SNX13-209ENST00000492626 ARAP1Q96P48 1450 aa5.53□□□□□ -1.52
SNX13-209ENST00000492626 MAP3K13O43283 966 aa5.53□□□□□ -1.52
SNX13-209ENST00000492626 GPIHBP1Q8IV16 184 aa5.53□□□□□ -1.52
SNX13-209ENST00000492626 G3V3G9 751 aa5.52□□□□□ -1.53
SNX13-209ENST00000492626 TOP2BQ02880 1626 aa5.52□□□□□ -1.53
SNX13-209ENST00000492626 LMTK3Q96Q04 1460 aa5.52□□□□□ -1.53
SNX13-209ENST00000492626 PPP1R37O75864 691 aa5.52□□□□□ -1.53
SNX13-209ENST00000492626 AK7Q96M32 723 aa5.52□□□□□ -1.53
SNX13-209ENST00000492626 ZRANB1Q9UGI0 708 aa5.51□□□□□ -1.53
SNX13-209ENST00000492626 KIF12Q96FN5 646 aa5.5□□□□□ -1.53
SNX13-209ENST00000492626 SCRIBQ14160 1630 aa5.5□□□□□ -1.53
SNX13-209ENST00000492626 IQSEC2Q5JU85 1478 aa5.5□□□□□ -1.53
SNX13-209ENST00000492626 CLASP1Q7Z460 1538 aa5.5□□□□□ -1.53
SNX13-209ENST00000492626 SUPT5HO00267 1087 aaKnown RBP5.5□□□□□ -1.53
SNX13-209ENST00000492626 FBXO22Q8NEZ5 403 aa5.5□□□□□ -1.53
SNX13-209ENST00000492626 TMEM106CQ9BVX2 250 aa5.49□□□□□ -1.53
SNX13-209ENST00000492626 BARGINQ6ZT62 677 aa5.49□□□□□ -1.53
SNX13-209ENST00000492626 IFT140Q96RY7 1462 aa5.48□□□□□ -1.53
SNX13-209ENST00000492626 ZCCHC6Q5VYS8 1495 aaKnown RBP5.48□□□□□ -1.53
SNX13-209ENST00000492626 ABCC8Q09428 1581 aa5.48□□□□□ -1.53
SNX13-209ENST00000492626 ATAD2BQ9ULI0 1458 aa5.48□□□□□ -1.53
SNX13-209ENST00000492626 SPDYE16A6NNV3 312 aaPredicted RBP5.48□□□□□ -1.53
SNX13-209ENST00000492626 ZMYND10O75800 440 aa5.48□□□□□ -1.53
SNX13-209ENST00000492626 MFSD10Q14728 455 aa5.47□□□□□ -1.53
SNX13-209ENST00000492626 TMC2Q8TDI7 906 aa5.47□□□□□ -1.53
SNX13-209ENST00000492626 SPATA31D1Q6ZQQ2 1576 aa5.47□□□□□ -1.53
SNX13-209ENST00000492626 CD44P16070 742 aaKnown RBP5.47□□□□□ -1.53
SNX13-209ENST00000492626 PPP1R15BQ5SWA1 713 aa5.46□□□□□ -1.53
SNX13-209ENST00000492626 CRISPLD2Q9H0B8 497 aa5.46□□□□□ -1.54
SNX13-209ENST00000492626 KIF13AQ9H1H9 1805 aa5.46□□□□□ -1.54
SNX13-209ENST00000492626 ZNF316A6NFI3 1004 aaPredicted RBP5.46□□□□□ -1.54
SNX13-209ENST00000492626 ARIH1Q9Y4X5 557 aaPredicted RBP5.46□□□□□ -1.54
SNX13-209ENST00000492626 SYNJ1O43426 1573 aa5.45□□□□□ -1.54
SNX13-209ENST00000492626 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.45□□□□□ -1.545e-6■■■■□ 22.9
SNX13-209ENST00000492626 HECW2Q9P2P5 1572 aa5.45□□□□□ -1.54
SNX13-209ENST00000492626 NCKAP5LQ9HCH0 1330 aa5.44□□□□□ -1.54
SNX13-209ENST00000492626 IL27Q8NEV9 243 aa5.44□□□□□ -1.54
SNX13-209ENST00000492626 RSPH6AQ9H0K4 717 aa5.44□□□□□ -1.54
SNX13-209ENST00000492626 ATP1B4Q9UN42 357 aaPredicted RBP5.44□□□□□ -1.54
SNX13-209ENST00000492626 CEP164Q9UPV0 1460 aa5.44□□□□□ -1.54
SNX13-209ENST00000492626 CHD1O14646 1710 aa5.44□□□□□ -1.54
SNX13-209ENST00000492626 NUTM2FA1L443 756 aa5.43□□□□□ -1.54
SNX13-209ENST00000492626 RBM26Q5T8P6 1007 aaKnown RBP5.43□□□□□ -1.54
SNX13-209ENST00000492626 FXR2P51116 673 aaKnown RBP eCLIP5.43□□□□□ -1.54
SNX13-209ENST00000492626 SMARCA4P51532 1647 aa5.42□□□□□ -1.54
SNX13-209ENST00000492626 PHF12Q96QT6 1004 aa5.42□□□□□ -1.54
SNX13-209ENST00000492626 CAMK2BQ13554 666 aa5.42□□□□□ -1.54
SNX13-209ENST00000492626 CHRDL2Q6WN34 429 aa5.42□□□□□ -1.54
SNX13-209ENST00000492626 DPYSL4O14531 572 aa5.41□□□□□ -1.54
SNX13-209ENST00000492626 MAP3K9P80192 1104 aa5.41□□□□□ -1.54
SNX13-209ENST00000492626 KDM4CQ9H3R0 1056 aa5.41□□□□□ -1.54
SNX13-209ENST00000492626 GPHNQ9NQX3 736 aaPredicted RBP5.41□□□□□ -1.54
SNX13-209ENST00000492626 MAPKBP1O60336 1514 aa5.41□□□□□ -1.54
SNX13-209ENST00000492626 RANGAP1P46060 587 aaPredicted RBP5.41□□□□□ -1.54
SNX13-209ENST00000492626 DDRGK1Q96HY6 314 aa5.41□□□□□ -1.54
SNX13-209ENST00000492626 GPBP1L1Q9HC44 474 aaPredicted RBP5.41□□□□□ -1.54
SNX13-209ENST00000492626 PDE4DQ08499 809 aa5.4□□□□□ -1.54
SNX13-209ENST00000492626 ZMYND15Q9H091 742 aa5.4□□□□□ -1.54
SNX13-209ENST00000492626 GRXCR2A6NFK2 248 aa5.39□□□□□ -1.55
SNX13-209ENST00000492626 MLLT3P42568 568 aaPredicted RBP5.39□□□□□ -1.55
SNX13-209ENST00000492626 MS4A4AQ96JQ5 239 aa5.39□□□□□ -1.55
SNX13-209ENST00000492626 TBC1D12O60347 775 aa5.39□□□□□ -1.55
SNX13-209ENST00000492626 TIE1P35590 1138 aa5.39□□□□□ -1.55
SNX13-209ENST00000492626 TRIM66O15016 1216 aa5.39□□□□□ -1.55
SNX13-209ENST00000492626 TTLL12Q14166 644 aaPredicted RBP5.38□□□□□ -1.55
SNX13-209ENST00000492626 MINK1Q8N4C8 1332 aaPredicted RBP5.38□□□□□ -1.55
SNX13-209ENST00000492626 CADPSQ9ULU8 1353 aa5.37□□□□□ -1.55
SNX13-209ENST00000492626 PDIA6Q15084 440 aa5.37□□□□□ -1.55
SNX13-209ENST00000492626 PIP4P2Q8N4L2 257 aa5.37□□□□□ -1.55
SNX13-209ENST00000492626 MS4A3Q96HJ5 214 aa5.37□□□□□ -1.55
SNX13-209ENST00000492626 FLIIQ13045 1269 aa5.37□□□□□ -1.55
SNX13-209ENST00000492626 GLI2P10070 1586 aa5.36□□□□□ -1.55
SNX13-209ENST00000492626 ARID3AQ99856 593 aa5.36□□□□□ -1.55
SNX13-209ENST00000492626 FCHSD2O94868 740 aa5.35□□□□□ -1.55
SNX13-209ENST00000492626 MAP2K5Q13163 448 aa5.35□□□□□ -1.55
SNX13-209ENST00000492626 PLPP6Q8IY26 295 aa5.35□□□□□ -1.55
SNX13-209ENST00000492626 PCMTD1Q96MG8 357 aaPredicted RBP5.35□□□□□ -1.55
SNX13-209ENST00000492626 EIF4G3O43432 1585 aaKnown RBP5.34□□□□□ -1.55
SNX13-209ENST00000492626 DSG2Q14126 1118 aa5.34□□□□□ -1.55
SNX13-209ENST00000492626 HIC1Q14526 733 aa5.34□□□□□ -1.55
SNX13-209ENST00000492626 KIAA0586Q9BVV6 1533 aa5.34□□□□□ -1.55
SNX13-209ENST00000492626 GNPATO15228 680 aa5.34□□□□□ -1.56
SNX13-209ENST00000492626 UPF1Q92900 1129 aaKnown RBP eCLIP5.34□□□□□ -1.56
SNX13-209ENST00000492626 PODXL2Q9NZ53 605 aa5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms