RNA–Protein interactions for RNA: ENST00000492058.1

NCKAP1-206, Transcript of NCK associated protein 1, humanhuman

TSL 5

Gene NCKAP1, Length 642 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-206ENST00000492058 DISP1Q96F81 1524 aa16.01■□□□□ 0.15
NCKAP1-206ENST00000492058 KDM5BQ9UGL1 1544 aa16.01■□□□□ 0.15
NCKAP1-206ENST00000492058 CD109Q6YHK3 1445 aa15.98■□□□□ 0.15
NCKAP1-206ENST00000492058 ZCCHC11Q5TAX3 1644 aaKnown RBP15.97■□□□□ 0.15
NCKAP1-206ENST00000492058 C19orf67A6NJJ6 358 aa15.96■□□□□ 0.15
NCKAP1-206ENST00000492058 PRR29P0C7W0 189 aa15.96■□□□□ 0.15
NCKAP1-206ENST00000492058 WDR7Q9Y4E6 1490 aa15.96■□□□□ 0.14
NCKAP1-206ENST00000492058 ARID3CA6NKF2 412 aa15.95■□□□□ 0.14
NCKAP1-206ENST00000492058 UGGT2Q9NYU1 1516 aa15.89■□□□□ 0.13
NCKAP1-206ENST00000492058 RAPGEF2Q9Y4G8 1499 aa15.89■□□□□ 0.13
NCKAP1-206ENST00000492058 ARID4BQ4LE39 1312 aaPredicted RBP15.89■□□□□ 0.13
NCKAP1-206ENST00000492058 MAGI3Q5TCQ9 1506 aa15.89■□□□□ 0.13
NCKAP1-206ENST00000492058 CHADLQ6NUI6 762 aa15.88■□□□□ 0.13
NCKAP1-206ENST00000492058 KIAA0556O60303 1618 aa15.87■□□□□ 0.13
NCKAP1-206ENST00000492058 KIF21BO75037 1637 aa15.87■□□□□ 0.13
NCKAP1-206ENST00000492058 RAPGEF3O95398 923 aa15.86■□□□□ 0.13
NCKAP1-206ENST00000492058 FAM9AQ8IZU1 332 aaPredicted RBP15.84■□□□□ 0.13
NCKAP1-206ENST00000492058 PTPRMP28827 1452 aa15.84■□□□□ 0.13
NCKAP1-206ENST00000492058 P3H3Q8IVL6 736 aa15.83■□□□□ 0.12
NCKAP1-206ENST00000492058 CFAP43Q8NDM7 1665 aa15.82■□□□□ 0.12
NCKAP1-206ENST00000492058 GABBR2O75899 941 aa15.8■□□□□ 0.12
NCKAP1-206ENST00000492058 HSPA2P54652 639 aa15.79■□□□□ 0.12
NCKAP1-206ENST00000492058 ARAP3Q8WWN8 1544 aa15.78■□□□□ 0.12
NCKAP1-206ENST00000492058 GOLGA3Q08378 1498 aa15.78■□□□□ 0.12
NCKAP1-206ENST00000492058 LMTK3Q96Q04 1460 aa15.77■□□□□ 0.11
NCKAP1-206ENST00000492058 ABCA8O94911 1581 aa15.76■□□□□ 0.11
NCKAP1-206ENST00000492058 ADAMTSL3P82987 1691 aa15.73■□□□□ 0.11
NCKAP1-206ENST00000492058 CERKQ8TCT0 537 aa15.72■□□□□ 0.11
NCKAP1-206ENST00000492058 ATP10BO94823 1461 aa15.71■□□□□ 0.11
NCKAP1-206ENST00000492058 PHLDB1Q86UU1 1377 aa15.71■□□□□ 0.11
NCKAP1-206ENST00000492058 PCF11O94913 1555 aaKnown RBP15.7■□□□□ 0.1
NCKAP1-206ENST00000492058 RANGAP1P46060 587 aaPredicted RBP15.68■□□□□ 0.1
NCKAP1-206ENST00000492058 MLECQ14165 292 aa15.68■□□□□ 0.1
NCKAP1-206ENST00000492058 CSRNP3Q8WYN3 585 aa15.68■□□□□ 0.1
NCKAP1-206ENST00000492058 MADDQ8WXG6 1647 aa15.68■□□□□ 0.1
NCKAP1-206ENST00000492058 FARP1Q9Y4F1 1045 aaPredicted RBP15.67■□□□□ 0.1
NCKAP1-206ENST00000492058 CTTNBP2Q8WZ74 1663 aa15.67■□□□□ 0.1
NCKAP1-206ENST00000492058 DISP3Q9P2K9 1392 aa15.66■□□□□ 0.1
NCKAP1-206ENST00000492058 CD44P16070 742 aaKnown RBP15.66■□□□□ 0.1
NCKAP1-206ENST00000492058 ILDR2Q71H61 639 aa15.66■□□□□ 0.1
NCKAP1-206ENST00000492058 BCORL1Q5H9F3 1711 aa15.65■□□□□ 0.1
NCKAP1-206ENST00000492058 NEO1Q92859 1461 aa15.64■□□□□ 0.09
NCKAP1-206ENST00000492058 ABCA9Q8IUA7 1624 aa15.62■□□□□ 0.09
NCKAP1-206ENST00000492058 RIMS1Q86UR5 1692 aaKnown RBP15.62■□□□□ 0.09
NCKAP1-206ENST00000492058 PLEKHD1A6NEE1 506 aa15.6■□□□□ 0.09
NCKAP1-206ENST00000492058 SOCS7O14512 581 aa15.6■□□□□ 0.09
NCKAP1-206ENST00000492058 CLCN6P51797 869 aa15.6■□□□□ 0.09
NCKAP1-206ENST00000492058 LHX8Q68G74 356 aa15.6■□□□□ 0.09
NCKAP1-206ENST00000492058 DENND4BO75064 1496 aaPredicted RBP15.59■□□□□ 0.09
NCKAP1-206ENST00000492058 POGZQ7Z3K3 1410 aa15.58■□□□□ 0.08
NCKAP1-206ENST00000492058 FRMPD1Q5SYB0 1578 aa15.58■□□□□ 0.08
NCKAP1-206ENST00000492058 STAG3Q9UJ98 1225 aa15.56■□□□□ 0.08
NCKAP1-206ENST00000492058 AKNAQ7Z591 1439 aa15.56■□□□□ 0.08
NCKAP1-206ENST00000492058 PRXQ9BXM0 1461 aa15.56■□□□□ 0.08
NCKAP1-206ENST00000492058 CEBPAP49715 358 aaPredicted RBP15.55■□□□□ 0.08
NCKAP1-206ENST00000492058 FANCAO15360 1455 aa15.53■□□□□ 0.08
NCKAP1-206ENST00000492058 ARHGEF40Q8TER5 1519 aa15.53■□□□□ 0.08
NCKAP1-206ENST00000492058 YEATS2Q9ULM3 1422 aa15.52■□□□□ 0.08
NCKAP1-206ENST00000492058 RAPGEF6Q8TEU7 1601 aa15.51■□□□□ 0.07
NCKAP1-206ENST00000492058 FHOD3Q2V2M9 1422 aa15.51■□□□□ 0.07
NCKAP1-206ENST00000492058 NUP153P49790 1475 aaKnown RBP15.49■□□□□ 0.07
NCKAP1-206ENST00000492058 MYT1LQ9UL68 1186 aa15.48■□□□□ 0.07
NCKAP1-206ENST00000492058 ZFYVE16Q7Z3T8 1539 aa15.48■□□□□ 0.07
NCKAP1-206ENST00000492058 ATP1B4Q9UN42 357 aaPredicted RBP15.47■□□□□ 0.07
NCKAP1-206ENST00000492058 RICTORQ6R327 1708 aa15.46■□□□□ 0.07
NCKAP1-206ENST00000492058 SCAPERQ9BY12 1400 aa15.45■□□□□ 0.06
NCKAP1-206ENST00000492058 EFCAB5A4FU69 1503 aa15.43■□□□□ 0.06
NCKAP1-206ENST00000492058 SIGLEC1Q9BZZ2 1709 aa15.43■□□□□ 0.06
NCKAP1-206ENST00000492058 DCBLD2Q96PD2 775 aa15.43■□□□□ 0.06
NCKAP1-206ENST00000492058 SAMD9Q5K651 1589 aa15.43■□□□□ 0.06
NCKAP1-206ENST00000492058 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.43■□□□□ 0.06
NCKAP1-206ENST00000492058 MAGI2Q86UL8 1455 aa15.42■□□□□ 0.06
NCKAP1-206ENST00000492058 HECW1Q76N89 1606 aa15.42■□□□□ 0.06
NCKAP1-206ENST00000492058 FER1L4A9Z1Z3 1794 aa15.41■□□□□ 0.06
NCKAP1-206ENST00000492058 CFAP74Q9C0B2 1584 aa15.41■□□□□ 0.06
NCKAP1-206ENST00000492058 ATP10AO60312 1499 aa15.4■□□□□ 0.06
NCKAP1-206ENST00000492058 ZMYM4Q5VZL5 1548 aa15.4■□□□□ 0.06
NCKAP1-206ENST00000492058 SPDYE4A6NLX3 237 aa15.4■□□□□ 0.06
NCKAP1-206ENST00000492058 EFCAB2Q5VUJ9 269 aa15.4■□□□□ 0.06
NCKAP1-206ENST00000492058 EHMT2Q96KQ7 1210 aa15.4■□□□□ 0.06
NCKAP1-206ENST00000492058 ZRANB1Q9UGI0 708 aa15.4■□□□□ 0.06
NCKAP1-206ENST00000492058 ESF1Q9H501 851 aaKnown RBP15.39■□□□□ 0.05
NCKAP1-206ENST00000492058 TTC37Q6PGP7 1564 aa15.39■□□□□ 0.05
NCKAP1-206ENST00000492058 UHRF1BP1Q6BDS2 1440 aa15.38■□□□□ 0.05
NCKAP1-206ENST00000492058 AFAP1Q8N556 730 aa15.38■□□□□ 0.05
NCKAP1-206ENST00000492058 ZNF579Q8NAF0 562 aaKnown RBP15.38■□□□□ 0.05
NCKAP1-206ENST00000492058 CREBZFQ9NS37 354 aa15.38■□□□□ 0.05
NCKAP1-206ENST00000492058 POTEIP0CG38 1075 aa15.37■□□□□ 0.05
NCKAP1-206ENST00000492058 PLCH2O75038 1416 aa15.36■□□□□ 0.05
NCKAP1-206ENST00000492058 C9orf84Q5VXU9 1444 aa15.36■□□□□ 0.05
NCKAP1-206ENST00000492058 ARHGEF12Q9NZN5 1544 aa15.36■□□□□ 0.05
NCKAP1-206ENST00000492058 SPATA31D1Q6ZQQ2 1576 aa15.36■□□□□ 0.05
NCKAP1-206ENST00000492058 PREX1Q8TCU6 1659 aa15.35■□□□□ 0.05
NCKAP1-206ENST00000492058 STRCQ7RTU9 1775 aa15.34■□□□□ 0.05
NCKAP1-206ENST00000492058 CDK13Q14004 1512 aaKnown RBP15.33■□□□□ 0.05
NCKAP1-206ENST00000492058 PAK3O75914 559 aaPredicted RBP15.33■□□□□ 0.04
NCKAP1-206ENST00000492058 UBAP1LF5GYI3 381 aa15.3■□□□□ 0.04
NCKAP1-206ENST00000492058 PTPRTO14522 1441 aa15.3■□□□□ 0.04
NCKAP1-206ENST00000492058 CDK11AQ9UQ88 783 aaPredicted RBP15.3■□□□□ 0.04
NCKAP1-206ENST00000492058 NCKAP5LQ9HCH0 1330 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms