RNA–Protein interactions for RNA: ENST00000491919.5

CHEK2-224, Transcript of checkpoint kinase 2, humanhuman

TSL 3

Gene CHEK2, Length 609 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-224ENST00000491919 KRTAP3-2Q9BYR7 98 aa11.89□□□□□ -0.51
CHEK2-224ENST00000491919 EMP3P54852 163 aa11.88□□□□□ -0.51
CHEK2-224ENST00000491919 ERCC6Q03468 1493 aa11.88□□□□□ -0.51
CHEK2-224ENST00000491919 SPNS2Q8IVW8 549 aa11.87□□□□□ -0.51
CHEK2-224ENST00000491919 HS3ST6Q96QI5 342 aa11.86□□□□□ -0.51
CHEK2-224ENST00000491919 SOX12O15370 315 aa11.84□□□□□ -0.51
CHEK2-224ENST00000491919 FBXO22Q8NEZ5 403 aa11.84□□□□□ -0.51
CHEK2-224ENST00000491919 MYO15BQ96JP2 1530 aa11.84□□□□□ -0.51
CHEK2-224ENST00000491919 SCRIBQ14160 1630 aa11.83□□□□□ -0.52
CHEK2-224ENST00000491919 FAM205CA6NFA0 338 aa11.83□□□□□ -0.52
CHEK2-224ENST00000491919 MMRN1Q13201 1228 aa11.83□□□□□ -0.52
CHEK2-224ENST00000491919 PKD2Q13563 968 aa11.82□□□□□ -0.52
CHEK2-224ENST00000491919 HOXB1P14653 301 aaPredicted RBP11.8□□□□□ -0.52
CHEK2-224ENST00000491919 BCL11BQ9C0K0 894 aaPredicted RBP11.8□□□□□ -0.52
CHEK2-224ENST00000491919 G3V3G9 751 aa11.79□□□□□ -0.52
CHEK2-224ENST00000491919 MFRPQ9BY79 579 aa11.79□□□□□ -0.52
CHEK2-224ENST00000491919 RGL2O15211 777 aa11.76□□□□□ -0.53
CHEK2-224ENST00000491919 DOK7Q18PE1 504 aa11.72□□□□□ -0.53
CHEK2-224ENST00000491919 STK24Q9Y6E0 443 aa11.72□□□□□ -0.53
CHEK2-224ENST00000491919 ECM2O94769 699 aaPredicted RBP11.71□□□□□ -0.53
CHEK2-224ENST00000491919 GPR153Q6NV75 609 aa11.71□□□□□ -0.53
CHEK2-224ENST00000491919 NLRP6P59044 892 aa11.69□□□□□ -0.54
CHEK2-224ENST00000491919 ZNF710Q8N1W2 664 aa11.68□□□□□ -0.54
CHEK2-224ENST00000491919 STK25O00506 426 aa11.67□□□□□ -0.54
CHEK2-224ENST00000491919 KIF3CO14782 793 aa11.67□□□□□ -0.54
CHEK2-224ENST00000491919 KHSRPQ92945 711 aaKnown RBP eCLIP11.64□□□□□ -0.55
CHEK2-224ENST00000491919 NESP48681 1621 aa11.64□□□□□ -0.55
CHEK2-224ENST00000491919 ERBB3P21860 1342 aa11.63□□□□□ -0.55
CHEK2-224ENST00000491919 THOC2Q8NI27 1593 aaKnown RBP11.63□□□□□ -0.55
CHEK2-224ENST00000491919 VARS2Q5ST30 1063 aaKnown RBP11.63□□□□□ -0.55
CHEK2-224ENST00000491919 ZSWIM6Q9HCJ5 1215 aa11.62□□□□□ -0.55
CHEK2-224ENST00000491919 PPP1R37O75864 691 aa11.61□□□□□ -0.55
CHEK2-224ENST00000491919 C2orf72A6NCS6 295 aa11.6□□□□□ -0.55
CHEK2-224ENST00000491919 ARSIQ5FYB1 569 aa11.6□□□□□ -0.55
CHEK2-224ENST00000491919 RIMBP2O15034 1052 aa11.58□□□□□ -0.56
CHEK2-224ENST00000491919 TAOK2Q9UL54 1235 aa11.57□□□□□ -0.56
CHEK2-224ENST00000491919 ZNF687Q8N1G0 1237 aa11.54□□□□□ -0.56
CHEK2-224ENST00000491919 SMARCA2P51531 1590 aa11.54□□□□□ -0.56
CHEK2-224ENST00000491919 POTEEQ6S8J3 1075 aa11.49□□□□□ -0.57
CHEK2-224ENST00000491919 ZNF316A6NFI3 1004 aaPredicted RBP11.48□□□□□ -0.57
CHEK2-224ENST00000491919 ZCCHC6Q5VYS8 1495 aaKnown RBP11.48□□□□□ -0.57
CHEK2-224ENST00000491919 BAZ1AQ9NRL2 1556 aaPredicted RBP11.47□□□□□ -0.57
CHEK2-224ENST00000491919 KIF21AQ7Z4S6 1674 aa11.46□□□□□ -0.58
CHEK2-224ENST00000491919 SLC34A2O95436 690 aa11.45□□□□□ -0.58
CHEK2-224ENST00000491919 NUDT7P0C024 238 aa11.45□□□□□ -0.58
CHEK2-224ENST00000491919 HS6ST3Q8IZP7 471 aa11.45□□□□□ -0.58
CHEK2-224ENST00000491919 DCAF1Q9Y4B6 1507 aa11.45□□□□□ -0.58
CHEK2-224ENST00000491919 KDM4FA0A1W2PPD8 638 aa11.44□□□□□ -0.58
CHEK2-224ENST00000491919 PCDHGA4Q9Y5G9 962 aa11.44□□□□□ -0.58
CHEK2-224ENST00000491919 RIMBP3CA6NJZ7 1639 aa11.43□□□□□ -0.58
CHEK2-224ENST00000491919 RIMBP3BA6NNM3 1639 aa11.43□□□□□ -0.58
CHEK2-224ENST00000491919 RIMBP3Q9UFD9 1639 aa11.43□□□□□ -0.58
CHEK2-224ENST00000491919 NKX1-1Q15270 411 aaPredicted RBP11.43□□□□□ -0.58
CHEK2-224ENST00000491919 NCAPD3P42695 1498 aa11.41□□□□□ -0.58
CHEK2-224ENST00000491919 LHX6Q9UPM6 363 aa11.41□□□□□ -0.58
CHEK2-224ENST00000491919 RNF166Q96A37 237 aaPredicted RBP11.39□□□□□ -0.59
CHEK2-224ENST00000491919 TMC2Q8TDI7 906 aa11.38□□□□□ -0.59
CHEK2-224ENST00000491919 MYT1LQ9UL68 1186 aa11.37□□□□□ -0.59
CHEK2-224ENST00000491919 LSM11P83369 360 aaKnown RBP eCLIP11.36□□□□□ -0.59
CHEK2-224ENST00000491919 AXIN2Q9Y2T1 843 aa11.35□□□□□ -0.59
CHEK2-224ENST00000491919 FOXK1P85037 733 aa11.34□□□□□ -0.59
CHEK2-224ENST00000491919 ANKRD13DQ6ZTN6 518 aa11.33□□□□□ -0.6
CHEK2-224ENST00000491919 ATAD2BQ9ULI0 1458 aa11.32□□□□□ -0.6
CHEK2-224ENST00000491919 CHGAP10645 457 aaKnown RBP11.32□□□□□ -0.6
CHEK2-224ENST00000491919 DSG2Q14126 1118 aa11.32□□□□□ -0.6
CHEK2-224ENST00000491919 PTCD2Q8WV60 388 aaKnown RBP11.32□□□□□ -0.6
CHEK2-224ENST00000491919 GPHNQ9NQX3 736 aaPredicted RBP11.32□□□□□ -0.6
CHEK2-224ENST00000491919 PLPP6Q8IY26 295 aa11.31□□□□□ -0.6
CHEK2-224ENST00000491919 LAMC3Q9Y6N6 1575 aa11.28□□□□□ -0.6
CHEK2-224ENST00000491919 ARHGEF11O15085 1522 aa11.28□□□□□ -0.6
CHEK2-224ENST00000491919 HMGXB3Q12766 1538 aa11.27□□□□□ -0.61
CHEK2-224ENST00000491919 PBX2P40425 430 aa11.25□□□□□ -0.61
CHEK2-224ENST00000491919 CRISPLD2Q9H0B8 497 aa11.24□□□□□ -0.61
CHEK2-224ENST00000491919 MRC2Q9UBG0 1479 aa11.24□□□□□ -0.61
CHEK2-224ENST00000491919 WDR62O43379 1518 aa11.24□□□□□ -0.61
CHEK2-224ENST00000491919 PTGER2P43116 358 aa11.23□□□□□ -0.61
CHEK2-224ENST00000491919 CYB5RLQ6IPT4 315 aa11.23□□□□□ -0.61
CHEK2-224ENST00000491919 DMRTA1Q5VZB9 504 aa11.22□□□□□ -0.61
CHEK2-224ENST00000491919 NCKAP5LQ9HCH0 1330 aa11.22□□□□□ -0.61
CHEK2-224ENST00000491919 PDS5BQ9NTI5 1447 aa11.21□□□□□ -0.61
CHEK2-224ENST00000491919 PSEN2P49810 448 aa11.2□□□□□ -0.62
CHEK2-224ENST00000491919 OXER1Q8TDS5 423 aa11.2□□□□□ -0.62
CHEK2-224ENST00000491919 GTPBP6O43824 516 aaPredicted RBP11.18□□□□□ -0.62
CHEK2-224ENST00000491919 ADGRD1Q6QNK2 874 aa11.18□□□□□ -0.62
CHEK2-224ENST00000491919 ARHGAP33O14559 1287 aa11.17□□□□□ -0.62
CHEK2-224ENST00000491919 HRO43593 1189 aa11.17□□□□□ -0.62
CHEK2-224ENST00000491919 BAZ1BQ9UIG0 1483 aaKnown RBP11.17□□□□□ -0.62
CHEK2-224ENST00000491919 SMARCA4P51532 1647 aa11.15□□□□□ -0.62
CHEK2-224ENST00000491919 ARAP1Q96P48 1450 aa11.14□□□□□ -0.63
CHEK2-224ENST00000491919 UPF1Q92900 1129 aaKnown RBP eCLIP11.13□□□□□ -0.63
CHEK2-224ENST00000491919 PSDA5PKW4 1024 aaPredicted RBP11.12□□□□□ -0.63
CHEK2-224ENST00000491919 PPP1R15BQ5SWA1 713 aa11.12□□□□□ -0.63
CHEK2-224ENST00000491919 TK2O00142 265 aa11.09□□□□□ -0.63
CHEK2-224ENST00000491919 PPP4R3BQ5MIZ7 849 aa11.08□□□□□ -0.64
CHEK2-224ENST00000491919 CADPS2Q86UW7 1296 aa11.07□□□□□ -0.64
CHEK2-224ENST00000491919 KCNK17Q96T54 332 aa11.06□□□□□ -0.64
CHEK2-224ENST00000491919 TBC1D12O60347 775 aa11.04□□□□□ -0.64
CHEK2-224ENST00000491919 FOSBP53539 338 aa11.04□□□□□ -0.64
CHEK2-224ENST00000491919 MFSD10Q14728 455 aa11.04□□□□□ -0.64
CHEK2-224ENST00000491919 ANO8Q9HCE9 1232 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms