RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 TARBP1Q13395 1621 aaKnown RBP14.7□□□□□ -0.06
SNED1-211ENST00000491761 TCOF1Q13428 1488 aaKnown RBP14.69□□□□□ -0.06
SNED1-211ENST00000491761 EIF5BO60841 1220 aaKnown RBP14.69□□□□□ -0.06
SNED1-211ENST00000491761 NBR1Q14596 966 aa14.69□□□□□ -0.06
SNED1-211ENST00000491761 KIAA0586Q9BVV6 1533 aa14.69□□□□□ -0.06
SNED1-211ENST00000491761 AKNAQ7Z591 1439 aa14.69□□□□□ -0.06
SNED1-211ENST00000491761 ZNF644Q9H582 1327 aaPredicted RBP14.68□□□□□ -0.06
SNED1-211ENST00000491761 ADAMTS12P58397 1594 aa14.68□□□□□ -0.06
SNED1-211ENST00000491761 CARMIL2Q6F5E8 1435 aa14.68□□□□□ -0.06
SNED1-211ENST00000491761 MRS2Q9HD23 443 aa14.67□□□□□ -0.06
SNED1-211ENST00000491761 FAM9BQ8IZU0 186 aa14.67□□□□□ -0.06
SNED1-211ENST00000491761 TSHZ2Q9NRE2 1034 aa14.67□□□□□ -0.06
SNED1-211ENST00000491761 SENP3-EIF4A1A0A087X0R7 540 aa14.66□□□□□ -0.06
SNED1-211ENST00000491761 TSPY4P0CV99 314 aa14.66□□□□□ -0.06
SNED1-211ENST00000491761 TSPY10P0CW01 314 aa14.66□□□□□ -0.06
SNED1-211ENST00000491761 MAGI3Q5TCQ9 1506 aa14.66□□□□□ -0.06
SNED1-211ENST00000491761 TRHP20396 242 aaPredicted RBP14.65□□□□□ -0.06
SNED1-211ENST00000491761 WASHC2AQ641Q2 1341 aa14.65□□□□□ -0.06
SNED1-211ENST00000491761 ESF1Q9H501 851 aaKnown RBP14.65□□□□□ -0.06
SNED1-211ENST00000491761 DAPK1P53355 1430 aa14.65□□□□□ -0.06
SNED1-211ENST00000491761 ROCK1Q13464 1354 aa14.65□□□□□ -0.06
SNED1-211ENST00000491761 ZNF608Q9ULD9 1512 aaPredicted RBP14.64□□□□□ -0.07
SNED1-211ENST00000491761 PBRM1Q86U86 1689 aa14.64□□□□□ -0.07
SNED1-211ENST00000491761 SALL2Q9Y467 1007 aaPredicted RBP14.63□□□□□ -0.07
SNED1-211ENST00000491761 WDR62O43379 1518 aa14.63□□□□□ -0.07
SNED1-211ENST00000491761 JPH4Q96JJ6 628 aa14.63□□□□□ -0.07
SNED1-211ENST00000491761 ARHGEF11O15085 1522 aa14.63□□□□□ -0.07
SNED1-211ENST00000491761 ANKRD30AQ9BXX3 1397 aa14.62□□□□□ -0.07
SNED1-211ENST00000491761 ABCC5O15440 1437 aa14.6□□□□□ -0.07
SNED1-211ENST00000491761 PKD2Q13563 968 aa14.6□□□□□ -0.07
SNED1-211ENST00000491761 GRIN2AQ12879 1464 aa14.6□□□□□ -0.07
SNED1-211ENST00000491761 TROQ12816 1431 aaPredicted RBP14.6□□□□□ -0.07
SNED1-211ENST00000491761 PRG4Q92954 1404 aaPredicted RBP14.59□□□□□ -0.07
SNED1-211ENST00000491761 CCDC7Q96M83 1385 aa14.58□□□□□ -0.07
SNED1-211ENST00000491761 CNTLNQ9NXG0 1405 aa14.58□□□□□ -0.07
SNED1-211ENST00000491761 ANKRD30BQ9BXX2 1392 aa14.58□□□□□ -0.08
SNED1-211ENST00000491761 LRRIQ1Q96JM4 1722 aa14.57□□□□□ -0.08
SNED1-211ENST00000491761 PRKRIP1Q9H875 184 aaPredicted RBP14.56□□□□□ -0.08
SNED1-211ENST00000491761 NUP153P49790 1475 aaKnown RBP14.56□□□□□ -0.08
SNED1-211ENST00000491761 NBPF8Q3BBV2 869 aa14.56□□□□□ -0.08
SNED1-211ENST00000491761 KIAA0556O60303 1618 aa14.56□□□□□ -0.08
SNED1-211ENST00000491761 GCC2Q8IWJ2 1684 aa14.55□□□□□ -0.08
SNED1-211ENST00000491761 ANP32AP39687 249 aaKnown RBP14.55□□□□□ -0.08
SNED1-211ENST00000491761 KDM2AQ9Y2K7 1162 aa14.55□□□□□ -0.08
SNED1-211ENST00000491761 DISP1Q96F81 1524 aa14.54□□□□□ -0.08
SNED1-211ENST00000491761 NUP155O75694 1391 aa14.54□□□□□ -0.08
SNED1-211ENST00000491761 RAPGEF6Q8TEU7 1601 aa14.54□□□□□ -0.08
SNED1-211ENST00000491761 RPRD2Q5VT52 1461 aaKnown RBP14.53□□□□□ -0.08
SNED1-211ENST00000491761 MAGI1Q96QZ7 1491 aaPredicted RBP14.53□□□□□ -0.08
SNED1-211ENST00000491761 CARD11Q9BXL7 1154 aa14.52□□□□□ -0.08
SNED1-211ENST00000491761 KIF7Q2M1P5 1343 aa14.52□□□□□ -0.09
SNED1-211ENST00000491761 SYNJ2O15056 1496 aa14.52□□□□□ -0.09
SNED1-211ENST00000491761 PLB1Q6P1J6 1458 aa14.51□□□□□ -0.09
SNED1-211ENST00000491761 CAMSAP2Q08AD1 1489 aa14.51□□□□□ -0.09
SNED1-211ENST00000491761 SENP3Q9H4L4 574 aaPredicted RBP14.51□□□□□ -0.09
SNED1-211ENST00000491761 ARXQ96QS3 562 aa14.5□□□□□ -0.09
SNED1-211ENST00000491761 ANKRD50Q9ULJ7 1429 aa14.5□□□□□ -0.09
SNED1-211ENST00000491761 C11orf95C9JLR9 678 aaPredicted RBP14.5□□□□□ -0.09
SNED1-211ENST00000491761 TMC1Q8TDI8 760 aa14.49□□□□□ -0.09
SNED1-211ENST00000491761 NCOA1Q15788 1441 aa14.49□□□□□ -0.09
SNED1-211ENST00000491761 KIAA1107Q9UPP5 1409 aa14.49□□□□□ -0.09
SNED1-211ENST00000491761 KDM6BO15054 1643 aa14.49□□□□□ -0.09
SNED1-211ENST00000491761 ERICH6BQ5W0A0 696 aa14.49□□□□□ -0.09
SNED1-211ENST00000491761 DNMT1P26358 1616 aaKnown RBP14.49□□□□□ -0.09
SNED1-211ENST00000491761 CHGAP10645 457 aaKnown RBP14.48□□□□□ -0.09
SNED1-211ENST00000491761 ANP32EQ9BTT0 268 aa14.48□□□□□ -0.09
SNED1-211ENST00000491761 HNRNPMP52272 730 aaKnown RBP eCLIP14.48□□□□□ -0.09
SNED1-211ENST00000491761 PPP4R2Q9NY27 417 aa14.48□□□□□ -0.09
SNED1-211ENST00000491761 USP47Q96K76 1375 aa14.48□□□□□ -0.09
SNED1-211ENST00000491761 RBM19Q9Y4C8 960 aaKnown RBP14.47□□□□□ -0.09
SNED1-211ENST00000491761 GPATCH8Q9UKJ3 1502 aaKnown RBP14.47□□□□□ -0.09
SNED1-211ENST00000491761 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.47□□□□□ -0.09
SNED1-211ENST00000491761 EIF4G3O43432 1585 aaKnown RBP14.46□□□□□ -0.09
SNED1-211ENST00000491761 DCAF11Q8TEB1 546 aa14.46□□□□□ -0.09
SNED1-211ENST00000491761 PTPRGP23470 1445 aa14.45□□□□□ -0.1
SNED1-211ENST00000491761 CCDC184Q52MB2 194 aa14.45□□□□□ -0.1
SNED1-211ENST00000491761 STAG3Q9UJ98 1225 aa14.45□□□□□ -0.1
SNED1-211ENST00000491761 DENND4BO75064 1496 aaPredicted RBP14.45□□□□□ -0.1
SNED1-211ENST00000491761 ZBED9Q6R2W3 1325 aa14.45□□□□□ -0.1
SNED1-211ENST00000491761 KDM5BQ9UGL1 1544 aa14.45□□□□□ -0.1
SNED1-211ENST00000491761 RSPH4AQ5TD94 716 aa14.44□□□□□ -0.1
SNED1-211ENST00000491761 C9orf84Q5VXU9 1444 aa14.43□□□□□ -0.1
SNED1-211ENST00000491761 ROCK2O75116 1388 aaKnown RBP14.42□□□□□ -0.1
SNED1-211ENST00000491761 ITSN2Q9NZM3 1697 aa14.42□□□□□ -0.1
SNED1-211ENST00000491761 ARID4BQ4LE39 1312 aaPredicted RBP14.42□□□□□ -0.1
SNED1-211ENST00000491761 KIF15Q9NS87 1388 aa14.42□□□□□ -0.1
SNED1-211ENST00000491761 RGL3Q3MIN7 710 aa14.41□□□□□ -0.1
SNED1-211ENST00000491761 TEX14Q8IWB6 1497 aa14.41□□□□□ -0.1
SNED1-211ENST00000491761 CCDC136Q96JN2 1154 aa14.41□□□□□ -0.1
SNED1-211ENST00000491761 PZPP20742 1482 aa14.4□□□□□ -0.1
SNED1-211ENST00000491761 RTN4Q9NQC3 1192 aaKnown RBP14.39□□□□□ -0.11
SNED1-211ENST00000491761 KIF14Q15058 1648 aa14.37□□□□□ -0.11
SNED1-211ENST00000491761 ST20-MTHFSA0A0A6YYL1 179 aa14.37□□□□□ -0.11
SNED1-211ENST00000491761 NUP160Q12769 1436 aa14.37□□□□□ -0.11
SNED1-211ENST00000491761 CEP170Q5SW79 1584 aa14.37□□□□□ -0.11
SNED1-211ENST00000491761 ZBTB47Q9UFB7 747 aaPredicted RBP14.37□□□□□ -0.11
SNED1-211ENST00000491761 ADGRL2O95490 1459 aa14.37□□□□□ -0.11
SNED1-211ENST00000491761 CANXP27824 592 aaKnown RBP14.37□□□□□ -0.11
SNED1-211ENST00000491761 B4GALNT3Q6L9W6 998 aa14.36□□□□□ -0.11
SNED1-211ENST00000491761 ATP10BO94823 1461 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms