RNA–Protein interactions for RNA: ENST00000491729.1

LSS-210, Transcript of lanosterol synthase, humanhuman

TSL 2

Gene LSS, Length 2,143 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-210ENST00000491729 TCOF1Q13428 1488 aaKnown RBP19.43■□□□□ 0.7
LSS-210ENST00000491729 DNAJC5Q9H3Z4 198 aa19.42■□□□□ 0.7
LSS-210ENST00000491729 CDC42BPBQ9Y5S2 1711 aa19.42■□□□□ 0.7
LSS-210ENST00000491729 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.41■□□□□ 0.75e-8■□□□□ 8.8
LSS-210ENST00000491729 ZNF316A6NFI3 1004 aaPredicted RBP19.39■□□□□ 0.69
LSS-210ENST00000491729 CHIC2Q9UKJ5 165 aa19.37■□□□□ 0.69
LSS-210ENST00000491729 CAMSAP2Q08AD1 1489 aa19.37■□□□□ 0.69
LSS-210ENST00000491729 PLCH2O75038 1416 aa19.36■□□□□ 0.69
LSS-210ENST00000491729 HNRNPMP52272 730 aaKnown RBP eCLIP19.36■□□□□ 0.69
LSS-210ENST00000491729 PREX2Q70Z35 1606 aa19.35■□□□□ 0.69
LSS-210ENST00000491729 MAPKBP1O60336 1514 aa19.35■□□□□ 0.69
LSS-210ENST00000491729 ITSN2Q9NZM3 1697 aa19.34■□□□□ 0.69
LSS-210ENST00000491729 ABCC5O15440 1437 aa19.34■□□□□ 0.69
LSS-210ENST00000491729 SAMD9LQ8IVG5 1584 aa19.33■□□□□ 0.69
LSS-210ENST00000491729 ABCA9Q8IUA7 1624 aa19.33■□□□□ 0.68
LSS-210ENST00000491729 MYO5CQ9NQX4 1742 aa19.32■□□□□ 0.68
LSS-210ENST00000491729 ARHGAP5Q13017 1502 aa19.31■□□□□ 0.68
LSS-210ENST00000491729 ARHGEF12Q9NZN5 1544 aa19.31■□□□□ 0.68
LSS-210ENST00000491729 MBD5Q9P267 1494 aa19.3■□□□□ 0.68
LSS-210ENST00000491729 DAPK1P53355 1430 aa19.29■□□□□ 0.68
LSS-210ENST00000491729 RRP7BPQ9NSQ0 103 aa19.28■□□□□ 0.68
LSS-210ENST00000491729 DHX57Q6P158 1386 aaKnown RBP19.28■□□□□ 0.68
LSS-210ENST00000491729 CD109Q6YHK3 1445 aa19.27■□□□□ 0.67
LSS-210ENST00000491729 FAM69CQ0P6D2 419 aa19.27■□□□□ 0.67
LSS-210ENST00000491729 EFCAB2Q5VUJ9 269 aa19.27■□□□□ 0.67
LSS-210ENST00000491729 DNMT1P26358 1616 aaKnown RBP19.26■□□□□ 0.67
LSS-210ENST00000491729 CENPBP07199 599 aaPredicted RBP19.26■□□□□ 0.67
LSS-210ENST00000491729 SYCP2Q9BX26 1530 aa19.25■□□□□ 0.67
LSS-210ENST00000491729 RAB3GAP2Q9H2M9 1393 aa19.23■□□□□ 0.67
LSS-210ENST00000491729 FANCAO15360 1455 aa19.23■□□□□ 0.67
LSS-210ENST00000491729 SCAF1Q9H7N4 1312 aaKnown RBP19.23■□□□□ 0.67
LSS-210ENST00000491729 DIP2BQ9P265 1576 aa19.22■□□□□ 0.67
LSS-210ENST00000491729 NAIPQ13075 1403 aa19.22■□□□□ 0.67
LSS-210ENST00000491729 TRAPPC8Q9Y2L5 1435 aa19.22■□□□□ 0.67
LSS-210ENST00000491729 AFAP1Q8N556 730 aa19.22■□□□□ 0.67
LSS-210ENST00000491729 ACIN1Q9UKV3 1341 aaKnown RBP19.21■□□□□ 0.67
LSS-210ENST00000491729 SETD5Q9C0A6 1442 aa19.21■□□□□ 0.67
LSS-210ENST00000491729 AKNAQ7Z591 1439 aa19.2■□□□□ 0.66
LSS-210ENST00000491729 KDM6BO15054 1643 aa19.2■□□□□ 0.66
LSS-210ENST00000491729 ARAP3Q8WWN8 1544 aa19.2■□□□□ 0.66
LSS-210ENST00000491729 HFM1A2PYH4 1435 aa19.19■□□□□ 0.66
LSS-210ENST00000491729 KIAA1107Q9UPP5 1409 aa19.19■□□□□ 0.66
LSS-210ENST00000491729 ABCC1P33527 1531 aa19.18■□□□□ 0.66
LSS-210ENST00000491729 MAP3K4Q9Y6R4 1608 aa19.18■□□□□ 0.66
LSS-210ENST00000491729 GLI2P10070 1586 aa19.18■□□□□ 0.66
LSS-210ENST00000491729 NCOA1Q15788 1441 aa19.17■□□□□ 0.66
LSS-210ENST00000491729 ARHGEF5Q12774 1597 aa19.17■□□□□ 0.66
LSS-210ENST00000491729 CROCC2H7BZ55 1655 aa19.16■□□□□ 0.66
LSS-210ENST00000491729 KIF13AQ9H1H9 1805 aa19.16■□□□□ 0.66
LSS-210ENST00000491729 SCAPERQ9BY12 1400 aa19.15■□□□□ 0.66
LSS-210ENST00000491729 C9orf84Q5VXU9 1444 aa19.15■□□□□ 0.66
LSS-210ENST00000491729 CCDC141Q6ZP82 1450 aa19.14■□□□□ 0.66
LSS-210ENST00000491729 TSPOAP1O95153 1857 aa19.14■□□□□ 0.65
LSS-210ENST00000491729 ROCK1Q13464 1354 aa19.13■□□□□ 0.65
LSS-210ENST00000491729 ADGRL1O94910 1474 aa19.13■□□□□ 0.65
LSS-210ENST00000491729 TSPY4P0CV99 314 aa19.13■□□□□ 0.65
LSS-210ENST00000491729 TSPY10P0CW01 314 aa19.13■□□□□ 0.65
LSS-210ENST00000491729 PPRC1Q5VV67 1664 aaKnown RBP19.13■□□□□ 0.65
LSS-210ENST00000491729 RAPGEF3O95398 923 aa19.11■□□□□ 0.65
LSS-210ENST00000491729 ADGRL2O95490 1459 aa19.11■□□□□ 0.65
LSS-210ENST00000491729 PLEKHH2Q8IVE3 1493 aa19.11■□□□□ 0.65
LSS-210ENST00000491729 RSPH4AQ5TD94 716 aa19.1■□□□□ 0.65
LSS-210ENST00000491729 SHANK2Q9UPX8 1470 aa19.09■□□□□ 0.65
LSS-210ENST00000491729 NEUROD1Q13562 356 aa19.09■□□□□ 0.65
LSS-210ENST00000491729 ANKRD30AQ9BXX3 1397 aa19.07■□□□□ 0.64
LSS-210ENST00000491729 GCC2Q8IWJ2 1684 aa19.06■□□□□ 0.64
LSS-210ENST00000491729 KIF15Q9NS87 1388 aa19.05■□□□□ 0.64
LSS-210ENST00000491729 ADGBQ8N7X0 1667 aa19.05■□□□□ 0.64
LSS-210ENST00000491729 NEO1Q92859 1461 aa19.04■□□□□ 0.64
LSS-210ENST00000491729 COL17A1Q9UMD9 1497 aaPredicted RBP19.04■□□□□ 0.64
LSS-210ENST00000491729 SPAG9O60271 1321 aaKnown RBP19.04■□□□□ 0.64
LSS-210ENST00000491729 MAST1Q9Y2H9 1570 aa19.03■□□□□ 0.64
LSS-210ENST00000491729 POGZQ7Z3K3 1410 aa19.01■□□□□ 0.63
LSS-210ENST00000491729 ANKRD50Q9ULJ7 1429 aa19.01■□□□□ 0.63
LSS-210ENST00000491729 DENND4BO75064 1496 aaPredicted RBP19.01■□□□□ 0.63
LSS-210ENST00000491729 PELP1Q8IZL8 1130 aaKnown RBP19.01■□□□□ 0.63
LSS-210ENST00000491729 ZFYVE16Q7Z3T8 1539 aa19■□□□□ 0.63
LSS-210ENST00000491729 TRHP20396 242 aaPredicted RBP19■□□□□ 0.63
LSS-210ENST00000491729 KIDINS220Q9ULH0 1771 aa18.98■□□□□ 0.63
LSS-210ENST00000491729 TRIM52Q96A61 297 aa18.98■□□□□ 0.63
LSS-210ENST00000491729 ZNF518AQ6AHZ1 1483 aa18.98■□□□□ 0.63
LSS-210ENST00000491729 CFAP74Q9C0B2 1584 aa18.98■□□□□ 0.63
LSS-210ENST00000491729 FRMPD1Q5SYB0 1578 aa18.97■□□□□ 0.63
LSS-210ENST00000491729 INO80Q9ULG1 1556 aaPredicted RBP18.97■□□□□ 0.63
LSS-210ENST00000491729 ATP7AQ04656 1500 aa18.97■□□□□ 0.63
LSS-210ENST00000491729 RTEL1-TNFRSF6BF6WH68 1400 aa18.97■□□□□ 0.63
LSS-210ENST00000491729 KDM5CP41229 1560 aa18.96■□□□□ 0.63
LSS-210ENST00000491729 MIER1Q8N108 512 aa18.96■□□□□ 0.63
LSS-210ENST00000491729 RICTORQ6R327 1708 aa18.95■□□□□ 0.62
LSS-210ENST00000491729 FOXD1Q16676 465 aa18.95■□□□□ 0.62
LSS-210ENST00000491729 MYT1LQ9UL68 1186 aa18.95■□□□□ 0.62
LSS-210ENST00000491729 PLXNC1O60486 1568 aa18.95■□□□□ 0.62
LSS-210ENST00000491729 MPHOSPH9Q99550 1183 aa18.92■□□□□ 0.62
LSS-210ENST00000491729 YEATS2Q9ULM3 1422 aa18.92■□□□□ 0.62
LSS-210ENST00000491729 TEX14Q8IWB6 1497 aa18.92■□□□□ 0.62
LSS-210ENST00000491729 MLH3Q9UHC1 1453 aa18.91■□□□□ 0.62
LSS-210ENST00000491729 SIN3AQ96ST3 1273 aa18.91■□□□□ 0.62
LSS-210ENST00000491729 PZPP20742 1482 aa18.9■□□□□ 0.62
LSS-210ENST00000491729 GTF3C3Q9Y5Q9 886 aa18.9■□□□□ 0.62
LSS-210ENST00000491729 DUOX2Q9NRD8 1548 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms