RNA–Protein interactions for RNA: ENST00000491460.5

CPA1-208, Transcript of carboxypeptidase A1, humanhuman

TSL 2

Gene CPA1, Length 1,063 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA1-208ENST00000491460 LMTK3Q96Q04 1460 aa23.88■■□□□ 1.41
CPA1-208ENST00000491460 ARHGAP35Q9NRY4 1499 aa23.88■■□□□ 1.41
CPA1-208ENST00000491460 FBXO41Q8TF61 875 aa23.86■■□□□ 1.41
CPA1-208ENST00000491460 EFCAB2Q5VUJ9 269 aa23.85■■□□□ 1.41
CPA1-208ENST00000491460 CHIC1Q5VXU3 224 aa23.81■■□□□ 1.4
CPA1-208ENST00000491460 TROQ12816 1431 aaPredicted RBP23.8■■□□□ 1.4
CPA1-208ENST00000491460 MLECQ14165 292 aa23.8■■□□□ 1.4
CPA1-208ENST00000491460 PLPPR3Q6T4P5 718 aa23.8■■□□□ 1.4
CPA1-208ENST00000491460 KIF14Q15058 1648 aa23.8■■□□□ 1.4
CPA1-208ENST00000491460 MYO5CQ9NQX4 1742 aa23.79■■□□□ 1.4
CPA1-208ENST00000491460 CLIP1P30622 1438 aa23.79■■□□□ 1.4
CPA1-208ENST00000491460 ATP10AO60312 1499 aa23.79■■□□□ 1.4
CPA1-208ENST00000491460 SIGLEC1Q9BZZ2 1709 aa23.79■■□□□ 1.4
CPA1-208ENST00000491460 C9orf84Q5VXU9 1444 aa23.78■■□□□ 1.4
CPA1-208ENST00000491460 ZNF518AQ6AHZ1 1483 aa23.75■■□□□ 1.39
CPA1-208ENST00000491460 ARHGAP5Q13017 1502 aa23.74■■□□□ 1.39
CPA1-208ENST00000491460 HSPA2P54652 639 aa23.74■■□□□ 1.39
CPA1-208ENST00000491460 FER1L4A9Z1Z3 1794 aa23.73■■□□□ 1.39
CPA1-208ENST00000491460 ARHGEF12Q9NZN5 1544 aa23.72■■□□□ 1.39
CPA1-208ENST00000491460 KDM5CP41229 1560 aa23.69■■□□□ 1.38
CPA1-208ENST00000491460 AFAP1Q8N556 730 aa23.68■■□□□ 1.38
CPA1-208ENST00000491460 MYT1LQ9UL68 1186 aa23.67■■□□□ 1.38
CPA1-208ENST00000491460 CCDC18Q5T9S5 1454 aa23.67■■□□□ 1.38
CPA1-208ENST00000491460 CASKIN1Q8WXD9 1431 aa23.66■■□□□ 1.38
CPA1-208ENST00000491460 LRRIQ1Q96JM4 1722 aa23.63■■□□□ 1.37
CPA1-208ENST00000491460 MLH3Q9UHC1 1453 aa23.61■■□□□ 1.37
CPA1-208ENST00000491460 REREQ9P2R6 1566 aa23.61■■□□□ 1.37
CPA1-208ENST00000491460 DIP2CQ9Y2E4 1556 aa23.61■■□□□ 1.37
CPA1-208ENST00000491460 PREX2Q70Z35 1606 aa23.59■■□□□ 1.37
CPA1-208ENST00000491460 CEBPAP49715 358 aaPredicted RBP23.59■■□□□ 1.37
CPA1-208ENST00000491460 CDC42BPBQ9Y5S2 1711 aa23.59■■□□□ 1.37
CPA1-208ENST00000491460 ABCC1P33527 1531 aa23.59■■□□□ 1.37
CPA1-208ENST00000491460 PREX1Q8TCU6 1659 aa23.57■■□□□ 1.36
CPA1-208ENST00000491460 TRAPPC8Q9Y2L5 1435 aa23.57■■□□□ 1.36
CPA1-208ENST00000491460 FYCO1Q9BQS8 1478 aa23.56■■□□□ 1.36
CPA1-208ENST00000491460 UHRF1BP1Q6BDS2 1440 aa23.55■■□□□ 1.36
CPA1-208ENST00000491460 ABCA6Q8N139 1617 aa23.55■■□□□ 1.36
CPA1-208ENST00000491460 CERKQ8TCT0 537 aa23.54■■□□□ 1.36
CPA1-208ENST00000491460 AGLP35573 1532 aa23.54■■□□□ 1.36
CPA1-208ENST00000491460 ESF1Q9H501 851 aaKnown RBP23.53■■□□□ 1.36
CPA1-208ENST00000491460 ITSN2Q9NZM3 1697 aa23.51■■□□□ 1.35
CPA1-208ENST00000491460 DMRT2Q9Y5R5 561 aa23.5■■□□□ 1.35
CPA1-208ENST00000491460 CDC42BPAQ5VT25 1732 aa23.46■■□□□ 1.35
CPA1-208ENST00000491460 ZNF777Q9ULD5 760 aaPredicted RBP23.46■■□□□ 1.35
CPA1-208ENST00000491460 CNTLNQ9NXG0 1405 aa23.45■■□□□ 1.34
CPA1-208ENST00000491460 KIDINS220Q9ULH0 1771 aa23.45■■□□□ 1.34
CPA1-208ENST00000491460 SETD1BQ9UPS6 1966 aaKnown RBP23.44■■□□□ 1.34
CPA1-208ENST00000491460 SAMD9LQ8IVG5 1584 aa23.43■■□□□ 1.34
CPA1-208ENST00000491460 GPATCH8Q9UKJ3 1502 aaKnown RBP23.43■■□□□ 1.34
CPA1-208ENST00000491460 C3P01024 1663 aa23.42■■□□□ 1.34
CPA1-208ENST00000491460 SPAG9O60271 1321 aaKnown RBP23.41■■□□□ 1.34
CPA1-208ENST00000491460 SYCP2Q9BX26 1530 aa23.41■■□□□ 1.34
CPA1-208ENST00000491460 STRCQ7RTU9 1775 aa23.4■■□□□ 1.34
CPA1-208ENST00000491460 PLEKHH2Q8IVE3 1493 aa23.39■■□□□ 1.34
CPA1-208ENST00000491460 CFDP1Q9UEE9 299 aaPredicted RBP23.38■■□□□ 1.33
CPA1-208ENST00000491460 KIAA1107Q9UPP5 1409 aa23.38■■□□□ 1.33
CPA1-208ENST00000491460 PTPRTO14522 1441 aa23.37■■□□□ 1.33
CPA1-208ENST00000491460 HNRNPMP52272 730 aaKnown RBP eCLIP23.37■■□□□ 1.33
CPA1-208ENST00000491460 CCNB3Q8WWL7 1395 aa23.37■■□□□ 1.33
CPA1-208ENST00000491460 MTUS2Q5JR59 1369 aa23.35■■□□□ 1.33
CPA1-208ENST00000491460 NPATQ14207 1427 aa23.33■■□□□ 1.33
CPA1-208ENST00000491460 ATP7AQ04656 1500 aa23.33■■□□□ 1.33
CPA1-208ENST00000491460 MROH2AA6NES4 1674 aa23.31■■□□□ 1.32
CPA1-208ENST00000491460 ZMYM3Q14202 1370 aa23.3■■□□□ 1.32
CPA1-208ENST00000491460 NCOA1Q15788 1441 aa23.3■■□□□ 1.32
CPA1-208ENST00000491460 INO80Q9ULG1 1556 aaPredicted RBP23.3■■□□□ 1.32
CPA1-208ENST00000491460 A2MP01023 1474 aa23.3■■□□□ 1.32
CPA1-208ENST00000491460 PLXNC1O60486 1568 aa23.28■■□□□ 1.32
CPA1-208ENST00000491460 SUPT6HQ7KZ85 1726 aaKnown RBP23.27■■□□□ 1.32
CPA1-208ENST00000491460 EHBP1L1Q8N3D4 1523 aa23.25■■□□□ 1.31
CPA1-208ENST00000491460 GGT6Q6P531 493 aa23.23■■□□□ 1.31
CPA1-208ENST00000491460 TIAM1Q13009 1591 aa23.23■■□□□ 1.31
CPA1-208ENST00000491460 CAMSAP1Q5T5Y3 1602 aa23.22■■□□□ 1.31
CPA1-208ENST00000491460 PPP6R1Q9UPN7 881 aa23.22■■□□□ 1.31
CPA1-208ENST00000491460 CEP162Q5TB80 1403 aa23.21■■□□□ 1.31
CPA1-208ENST00000491460 CLTCQ00610 1675 aaKnown RBP23.2■■□□□ 1.3
CPA1-208ENST00000491460 LTBP4Q8N2S1 1624 aa23.2■■□□□ 1.3
CPA1-208ENST00000491460 ZNF644Q9H582 1327 aaPredicted RBP23.2■■□□□ 1.3
CPA1-208ENST00000491460 IQSEC2Q5JU85 1478 aa23.19■■□□□ 1.3
CPA1-208ENST00000491460 MBD5Q9P267 1494 aa23.19■■□□□ 1.3
CPA1-208ENST00000491460 PTPRKQ15262 1439 aa23.19■■□□□ 1.3
CPA1-208ENST00000491460 ADGBQ8N7X0 1667 aa23.19■■□□□ 1.3
CPA1-208ENST00000491460 RTEL1-TNFRSF6BF6WH68 1400 aa23.18■■□□□ 1.3
CPA1-208ENST00000491460 PLA2R1Q13018 1463 aa23.16■■□□□ 1.3
CPA1-208ENST00000491460 MYO3AQ8NEV4 1616 aa23.15■■□□□ 1.3
CPA1-208ENST00000491460 PKD2Q13563 968 aa23.15■■□□□ 1.3
CPA1-208ENST00000491460 ZNF142P52746 1687 aaPredicted RBP23.15■■□□□ 1.3
CPA1-208ENST00000491460 NCKAP5LQ9HCH0 1330 aa23.14■■□□□ 1.3
CPA1-208ENST00000491460 CEP170BQ9Y4F5 1589 aaPredicted RBP23.14■■□□□ 1.29
CPA1-208ENST00000491460 DHX29Q7Z478 1369 aaKnown RBP23.14■■□□□ 1.29
CPA1-208ENST00000491460 DISP3Q9P2K9 1392 aa23.12■■□□□ 1.29
CPA1-208ENST00000491460 TCOF1Q13428 1488 aaKnown RBP23.11■■□□□ 1.29
CPA1-208ENST00000491460 CCDC141Q6ZP82 1450 aa23.11■■□□□ 1.29
CPA1-208ENST00000491460 NCOA2Q15596 1464 aa23.1■■□□□ 1.29
CPA1-208ENST00000491460 RSPH4AQ5TD94 716 aa23.09■■□□□ 1.29
CPA1-208ENST00000491460 ZNF335Q9H4Z2 1342 aaPredicted RBP23.08■■□□□ 1.28
CPA1-208ENST00000491460 A2ML1A8K2U0 1454 aa23.07■■□□□ 1.28
CPA1-208ENST00000491460 CAMSAP2Q08AD1 1489 aa23.07■■□□□ 1.28
CPA1-208ENST00000491460 KIF3BO15066 747 aa23.06■■□□□ 1.28
CPA1-208ENST00000491460 FAM135AQ9P2D6 1515 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms