RNA–Protein interactions for RNA: ENST00000491349.5

RNF38-209, Transcript of ring finger protein 38, humanhuman

TSL 5

Gene RNF38, Length 959 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-209ENST00000491349 DIP2BQ9P265 1576 aa12.9□□□□□ -0.35
RNF38-209ENST00000491349 TROQ12816 1431 aaPredicted RBP12.89□□□□□ -0.35
RNF38-209ENST00000491349 EHBP1L1Q8N3D4 1523 aa12.89□□□□□ -0.35
RNF38-209ENST00000491349 GLI2P10070 1586 aa12.89□□□□□ -0.35
RNF38-209ENST00000491349 KIF13AQ9H1H9 1805 aa12.88□□□□□ -0.35
RNF38-209ENST00000491349 CAPN15O75808 1086 aa12.88□□□□□ -0.35
RNF38-209ENST00000491349 DSG3P32926 999 aa12.87□□□□□ -0.35
RNF38-209ENST00000491349 SUPT6HQ7KZ85 1726 aaKnown RBP12.87□□□□□ -0.35
RNF38-209ENST00000491349 TEX14Q8IWB6 1497 aa12.85□□□□□ -0.35
RNF38-209ENST00000491349 TSPOAP1O95153 1857 aa12.85□□□□□ -0.35
RNF38-209ENST00000491349 ABCA9Q8IUA7 1624 aa12.84□□□□□ -0.35
RNF38-209ENST00000491349 CD109Q6YHK3 1445 aa12.84□□□□□ -0.35
RNF38-209ENST00000491349 CFAP74Q9C0B2 1584 aa12.84□□□□□ -0.35
RNF38-209ENST00000491349 MYO5CQ9NQX4 1742 aa12.84□□□□□ -0.35
RNF38-209ENST00000491349 MAP3K4Q9Y6R4 1608 aa12.84□□□□□ -0.35
RNF38-209ENST00000491349 LRRC9Q6ZRR7 1453 aa12.83□□□□□ -0.36
RNF38-209ENST00000491349 ITSN2Q9NZM3 1697 aa12.82□□□□□ -0.36
RNF38-209ENST00000491349 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.81□□□□□ -0.36
RNF38-209ENST00000491349 CCNB3Q8WWL7 1395 aa12.81□□□□□ -0.36
RNF38-209ENST00000491349 MAGI3Q5TCQ9 1506 aa12.78□□□□□ -0.36
RNF38-209ENST00000491349 TTC37Q6PGP7 1564 aa12.78□□□□□ -0.36
RNF38-209ENST00000491349 PHLDB1Q86UU1 1377 aa12.78□□□□□ -0.36
RNF38-209ENST00000491349 ARHGAP5Q13017 1502 aa12.78□□□□□ -0.36
RNF38-209ENST00000491349 EFCAB2Q5VUJ9 269 aa12.77□□□□□ -0.37
RNF38-209ENST00000491349 ARAP3Q8WWN8 1544 aa12.77□□□□□ -0.37
RNF38-209ENST00000491349 PLCH2O75038 1416 aa12.76□□□□□ -0.37
RNF38-209ENST00000491349 NCOA2Q15596 1464 aa12.76□□□□□ -0.37
RNF38-209ENST00000491349 PREX2Q70Z35 1606 aa12.76□□□□□ -0.37
RNF38-209ENST00000491349 CDC42BPAQ5VT25 1732 aa12.76□□□□□ -0.37
RNF38-209ENST00000491349 NEO1Q92859 1461 aa12.75□□□□□ -0.37
RNF38-209ENST00000491349 CFDP1Q9UEE9 299 aaPredicted RBP12.75□□□□□ -0.37
RNF38-209ENST00000491349 FANCAO15360 1455 aa12.74□□□□□ -0.37
RNF38-209ENST00000491349 KANK4Q5T7N3 995 aaPredicted RBP12.74□□□□□ -0.37
RNF38-209ENST00000491349 CDC42BPBQ9Y5S2 1711 aa12.73□□□□□ -0.37
RNF38-209ENST00000491349 ZNF777Q9ULD5 760 aaPredicted RBP12.72□□□□□ -0.37
RNF38-209ENST00000491349 PLEKHH2Q8IVE3 1493 aa12.72□□□□□ -0.37
RNF38-209ENST00000491349 PPRC1Q5VV67 1664 aaKnown RBP12.71□□□□□ -0.37
RNF38-209ENST00000491349 KDM6BO15054 1643 aa12.71□□□□□ -0.37
RNF38-209ENST00000491349 GPATCH8Q9UKJ3 1502 aaKnown RBP12.7□□□□□ -0.38
RNF38-209ENST00000491349 MYOM3Q5VTT5 1437 aa12.7□□□□□ -0.38
RNF38-209ENST00000491349 AKNAQ7Z591 1439 aa12.7□□□□□ -0.38
RNF38-209ENST00000491349 SAMD1Q6SPF0 538 aaPredicted RBP12.69□□□□□ -0.38
RNF38-209ENST00000491349 ADGRL1O94910 1474 aa12.69□□□□□ -0.38
RNF38-209ENST00000491349 MIA2Q96PC5 1412 aa12.69□□□□□ -0.38
RNF38-209ENST00000491349 ZNF219Q9P2Y4 722 aaPredicted RBP12.68□□□□□ -0.38
RNF38-209ENST00000491349 MYT1LQ9UL68 1186 aa12.68□□□□□ -0.38
RNF38-209ENST00000491349 PPARGC1BQ86YN6 1023 aaKnown RBP12.67□□□□□ -0.38
RNF38-209ENST00000491349 DENND4BO75064 1496 aaPredicted RBP12.66□□□□□ -0.38
RNF38-209ENST00000491349 RSPH4AQ5TD94 716 aa12.66□□□□□ -0.38
RNF38-209ENST00000491349 SCAPERQ9BY12 1400 aa12.65□□□□□ -0.38
RNF38-209ENST00000491349 SLC4A1APQ9BWU0 796 aaKnown RBP12.65□□□□□ -0.38
RNF38-209ENST00000491349 PTPN23Q9H3S7 1636 aa12.64□□□□□ -0.39
RNF38-209ENST00000491349 ZNF518AQ6AHZ1 1483 aa12.64□□□□□ -0.39
RNF38-209ENST00000491349 FGD6Q6ZV73 1430 aa12.63□□□□□ -0.39
RNF38-209ENST00000491349 KIAA1107Q9UPP5 1409 aa12.63□□□□□ -0.39
RNF38-209ENST00000491349 ABCC1P33527 1531 aa12.63□□□□□ -0.39
RNF38-209ENST00000491349 MYCNP04198 464 aaPredicted RBP12.63□□□□□ -0.39
RNF38-209ENST00000491349 CAMSAP2Q08AD1 1489 aa12.63□□□□□ -0.39
RNF38-209ENST00000491349 SAMD9LQ8IVG5 1584 aa12.63□□□□□ -0.39
RNF38-209ENST00000491349 TSPY4P0CV99 314 aa12.62□□□□□ -0.39
RNF38-209ENST00000491349 TSPY10P0CW01 314 aa12.62□□□□□ -0.39
RNF38-209ENST00000491349 FAM50AQ14320 339 aaKnown RBP12.62□□□□□ -0.39
RNF38-209ENST00000491349 SYCP2Q9BX26 1530 aa12.61□□□□□ -0.39
RNF38-209ENST00000491349 ABCB7O75027 752 aa12.6□□□□□ -0.39
RNF38-209ENST00000491349 POGZQ7Z3K3 1410 aa12.6□□□□□ -0.39
RNF38-209ENST00000491349 RICTORQ6R327 1708 aa12.59□□□□□ -0.39
RNF38-209ENST00000491349 HNRNPMP52272 730 aaKnown RBP eCLIP12.59□□□□□ -0.39
RNF38-209ENST00000491349 ARHGEF5Q12774 1597 aa12.59□□□□□ -0.39
RNF38-209ENST00000491349 CCDC141Q6ZP82 1450 aa12.59□□□□□ -0.39
RNF38-209ENST00000491349 RAPGEF3O95398 923 aa12.58□□□□□ -0.4
RNF38-209ENST00000491349 MAGI2Q86UL8 1455 aa12.58□□□□□ -0.4
RNF38-209ENST00000491349 SPAG9O60271 1321 aaKnown RBP12.58□□□□□ -0.4
RNF38-209ENST00000491349 HECW2Q9P2P5 1572 aa12.57□□□□□ -0.4
RNF38-209ENST00000491349 TCOF1Q13428 1488 aaKnown RBP12.57□□□□□ -0.4
RNF38-209ENST00000491349 ZMYM4Q5VZL5 1548 aa12.56□□□□□ -0.4
RNF38-209ENST00000491349 ZNF644Q9H582 1327 aaPredicted RBP12.56□□□□□ -0.4
RNF38-209ENST00000491349 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.56□□□□□ -0.4
RNF38-209ENST00000491349 ZFYVE16Q7Z3T8 1539 aa12.55□□□□□ -0.4
RNF38-209ENST00000491349 DNMT1P26358 1616 aaKnown RBP12.55□□□□□ -0.4
RNF38-209ENST00000491349 AFAP1Q8N556 730 aa12.54□□□□□ -0.4
RNF38-209ENST00000491349 KDM5CP41229 1560 aa12.54□□□□□ -0.4
RNF38-209ENST00000491349 RRBP1Q9P2E9 1410 aaKnown RBP12.54□□□□□ -0.4
RNF38-209ENST00000491349 TRAPPC8Q9Y2L5 1435 aa12.54□□□□□ -0.4
RNF38-209ENST00000491349 CROCC2H7BZ55 1655 aa12.53□□□□□ -0.4
RNF38-209ENST00000491349 RTEL1-TNFRSF6BF6WH68 1400 aa12.53□□□□□ -0.4
RNF38-209ENST00000491349 MLH3Q9UHC1 1453 aa12.53□□□□□ -0.4
RNF38-209ENST00000491349 ATP7AQ04656 1500 aa12.52□□□□□ -0.4
RNF38-209ENST00000491349 FRMPD1Q5SYB0 1578 aa12.52□□□□□ -0.4
RNF38-209ENST00000491349 DAPK1P53355 1430 aa12.52□□□□□ -0.41
RNF38-209ENST00000491349 MBD5Q9P267 1494 aa12.52□□□□□ -0.41
RNF38-209ENST00000491349 COL17A1Q9UMD9 1497 aaPredicted RBP12.52□□□□□ -0.41
RNF38-209ENST00000491349 SHANK2Q9UPX8 1470 aa12.52□□□□□ -0.41
RNF38-209ENST00000491349 ARHGEF12Q9NZN5 1544 aa12.52□□□□□ -0.41
RNF38-209ENST00000491349 ADGBQ8N7X0 1667 aa12.51□□□□□ -0.41
RNF38-209ENST00000491349 ITGAEP38570 1179 aa12.51□□□□□ -0.41
RNF38-209ENST00000491349 FOXD4L1Q9NU39 408 aa12.51□□□□□ -0.41
RNF38-209ENST00000491349 C9orf84Q5VXU9 1444 aa12.51□□□□□ -0.41
RNF38-209ENST00000491349 ARHGEF40Q8TER5 1519 aa12.51□□□□□ -0.41
RNF38-209ENST00000491349 ANKRD30AQ9BXX3 1397 aa12.5□□□□□ -0.41
RNF38-209ENST00000491349 INO80Q9ULG1 1556 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms