RNA–Protein interactions for RNA: ENST00000490839.1

AGAP3-222, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 4

Gene AGAP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-222ENST00000490839 FMN1Q68DA7 1419 aa25.46■■□□□ 1.67
AGAP3-222ENST00000490839 HSPA2P54652 639 aa25.44■■□□□ 1.66
AGAP3-222ENST00000490839 PLPPR3Q6T4P5 718 aa25.42■■□□□ 1.66
AGAP3-222ENST00000490839 ARHGEF12Q9NZN5 1544 aa25.42■■□□□ 1.66
AGAP3-222ENST00000490839 ATP10AO60312 1499 aa25.41■■□□□ 1.66
AGAP3-222ENST00000490839 C9orf84Q5VXU9 1444 aa25.41■■□□□ 1.66
AGAP3-222ENST00000490839 MLECQ14165 292 aa25.41■■□□□ 1.66
AGAP3-222ENST00000490839 EFCAB2Q5VUJ9 269 aa25.39■■□□□ 1.66
AGAP3-222ENST00000490839 KIF14Q15058 1648 aa25.38■■□□□ 1.65
AGAP3-222ENST00000490839 CDK11AQ9UQ88 783 aaPredicted RBP25.38■■□□□ 1.65
AGAP3-222ENST00000490839 ARHGAP35Q9NRY4 1499 aa25.38■■□□□ 1.65
AGAP3-222ENST00000490839 ATP1B4Q9UN42 357 aaPredicted RBP25.36■■□□□ 1.65
AGAP3-222ENST00000490839 ZNF518AQ6AHZ1 1483 aa25.35■■□□□ 1.65
AGAP3-222ENST00000490839 UBTFP17480 764 aaKnown RBP25.35■■□□□ 1.65
AGAP3-222ENST00000490839 TROQ12816 1431 aaPredicted RBP25.34■■□□□ 1.65
AGAP3-222ENST00000490839 PREX1Q8TCU6 1659 aa25.33■■□□□ 1.65
AGAP3-222ENST00000490839 KDM5CP41229 1560 aa25.33■■□□□ 1.65
AGAP3-222ENST00000490839 ARHGAP5Q13017 1502 aa25.32■■□□□ 1.64
AGAP3-222ENST00000490839 CLIP1P30622 1438 aa25.31■■□□□ 1.64
AGAP3-222ENST00000490839 CERKQ8TCT0 537 aa25.27■■□□□ 1.64
AGAP3-222ENST00000490839 EHMT2Q96KQ7 1210 aa25.27■■□□□ 1.64
AGAP3-222ENST00000490839 REREQ9P2R6 1566 aa25.27■■□□□ 1.64
AGAP3-222ENST00000490839 DIP2CQ9Y2E4 1556 aa25.26■■□□□ 1.63
AGAP3-222ENST00000490839 LRRIQ1Q96JM4 1722 aa25.26■■□□□ 1.63
AGAP3-222ENST00000490839 AFAP1Q8N556 730 aa25.23■■□□□ 1.63
AGAP3-222ENST00000490839 CDC42BPBQ9Y5S2 1711 aa25.22■■□□□ 1.63
AGAP3-222ENST00000490839 CEBPAP49715 358 aaPredicted RBP25.21■■□□□ 1.63
AGAP3-222ENST00000490839 MLH3Q9UHC1 1453 aa25.21■■□□□ 1.63
AGAP3-222ENST00000490839 UHRF1BP1Q6BDS2 1440 aa25.2■■□□□ 1.63
AGAP3-222ENST00000490839 SETD1BQ9UPS6 1966 aaKnown RBP25.2■■□□□ 1.63
AGAP3-222ENST00000490839 PREX2Q70Z35 1606 aa25.2■■□□□ 1.62
AGAP3-222ENST00000490839 ABCA6Q8N139 1617 aa25.2■■□□□ 1.62
AGAP3-222ENST00000490839 MYT1LQ9UL68 1186 aa25.18■■□□□ 1.62
AGAP3-222ENST00000490839 ABCC1P33527 1531 aa25.17■■□□□ 1.62
AGAP3-222ENST00000490839 STRCQ7RTU9 1775 aa25.17■■□□□ 1.62
AGAP3-222ENST00000490839 CCDC18Q5T9S5 1454 aa25.16■■□□□ 1.62
AGAP3-222ENST00000490839 DMRT2Q9Y5R5 561 aa25.16■■□□□ 1.62
AGAP3-222ENST00000490839 AGLP35573 1532 aa25.16■■□□□ 1.62
AGAP3-222ENST00000490839 ITSN2Q9NZM3 1697 aa25.15■■□□□ 1.62
AGAP3-222ENST00000490839 CASKIN1Q8WXD9 1431 aa25.14■■□□□ 1.62
AGAP3-222ENST00000490839 C3P01024 1663 aa25.13■■□□□ 1.61
AGAP3-222ENST00000490839 TRAPPC8Q9Y2L5 1435 aa25.12■■□□□ 1.61
AGAP3-222ENST00000490839 CHIC1Q5VXU3 224 aa25.1■■□□□ 1.61
AGAP3-222ENST00000490839 CDC42BPAQ5VT25 1732 aa25.08■■□□□ 1.61
AGAP3-222ENST00000490839 KIDINS220Q9ULH0 1771 aa25.08■■□□□ 1.6
AGAP3-222ENST00000490839 ESF1Q9H501 851 aaKnown RBP25.07■■□□□ 1.6
AGAP3-222ENST00000490839 PTPRTO14522 1441 aa25.06■■□□□ 1.6
AGAP3-222ENST00000490839 CNTLNQ9NXG0 1405 aa25.06■■□□□ 1.6
AGAP3-222ENST00000490839 FYCO1Q9BQS8 1478 aa25.04■■□□□ 1.6
AGAP3-222ENST00000490839 SAMD9LQ8IVG5 1584 aa25.01■■□□□ 1.59
AGAP3-222ENST00000490839 MROH2AA6NES4 1674 aa24.98■■□□□ 1.59
AGAP3-222ENST00000490839 SYCP2Q9BX26 1530 aa24.97■■□□□ 1.59
AGAP3-222ENST00000490839 NCOA1Q15788 1441 aa24.97■■□□□ 1.59
AGAP3-222ENST00000490839 NPATQ14207 1427 aa24.95■■□□□ 1.59
AGAP3-222ENST00000490839 GPATCH8Q9UKJ3 1502 aaKnown RBP24.95■■□□□ 1.58
AGAP3-222ENST00000490839 LTBP4Q8N2S1 1624 aa24.94■■□□□ 1.58
AGAP3-222ENST00000490839 SPAG9O60271 1321 aaKnown RBP24.92■■□□□ 1.58
AGAP3-222ENST00000490839 IQSEC2Q5JU85 1478 aa24.92■■□□□ 1.58
AGAP3-222ENST00000490839 ZNF777Q9ULD5 760 aaPredicted RBP24.92■■□□□ 1.58
AGAP3-222ENST00000490839 ATP7AQ04656 1500 aa24.91■■□□□ 1.58
AGAP3-222ENST00000490839 PLEKHH2Q8IVE3 1493 aa24.91■■□□□ 1.58
AGAP3-222ENST00000490839 SUPT6HQ7KZ85 1726 aaKnown RBP24.9■■□□□ 1.58
AGAP3-222ENST00000490839 KIAA1107Q9UPP5 1409 aa24.9■■□□□ 1.58
AGAP3-222ENST00000490839 DISP3Q9P2K9 1392 aa24.9■■□□□ 1.58
AGAP3-222ENST00000490839 PLXNC1O60486 1568 aa24.89■■□□□ 1.58
AGAP3-222ENST00000490839 INO80Q9ULG1 1556 aaPredicted RBP24.89■■□□□ 1.58
AGAP3-222ENST00000490839 CAMSAP1Q5T5Y3 1602 aa24.89■■□□□ 1.57
AGAP3-222ENST00000490839 ZMYM3Q14202 1370 aa24.88■■□□□ 1.57
AGAP3-222ENST00000490839 A2MP01023 1474 aa24.85■■□□□ 1.57
AGAP3-222ENST00000490839 HNRNPMP52272 730 aaKnown RBP eCLIP24.85■■□□□ 1.57
AGAP3-222ENST00000490839 ZNF142P52746 1687 aaPredicted RBP24.85■■□□□ 1.57
AGAP3-222ENST00000490839 CLTCQ00610 1675 aaKnown RBP24.85■■□□□ 1.57
AGAP3-222ENST00000490839 CCNB3Q8WWL7 1395 aa24.83■■□□□ 1.57
AGAP3-222ENST00000490839 CFDP1Q9UEE9 299 aaPredicted RBP24.83■■□□□ 1.57
AGAP3-222ENST00000490839 MYO3AQ8NEV4 1616 aa24.83■■□□□ 1.56
AGAP3-222ENST00000490839 SPATA31D1Q6ZQQ2 1576 aa24.82■■□□□ 1.56
AGAP3-222ENST00000490839 PLA2R1Q13018 1463 aa24.8■■□□□ 1.56
AGAP3-222ENST00000490839 ADGBQ8N7X0 1667 aa24.79■■□□□ 1.56
AGAP3-222ENST00000490839 ILDR2Q71H61 639 aa24.79■■□□□ 1.56
AGAP3-222ENST00000490839 CEP170BQ9Y4F5 1589 aaPredicted RBP24.79■■□□□ 1.56
AGAP3-222ENST00000490839 PTPRKQ15262 1439 aa24.78■■□□□ 1.56
AGAP3-222ENST00000490839 MTUS2Q5JR59 1369 aa24.78■■□□□ 1.56
AGAP3-222ENST00000490839 NCKAP5LQ9HCH0 1330 aa24.75■■□□□ 1.55
AGAP3-222ENST00000490839 TCOF1Q13428 1488 aaKnown RBP24.75■■□□□ 1.55
AGAP3-222ENST00000490839 SOCS7O14512 581 aa24.74■■□□□ 1.55
AGAP3-222ENST00000490839 PKD2Q13563 968 aa24.74■■□□□ 1.55
AGAP3-222ENST00000490839 PPP6R1Q9UPN7 881 aa24.74■■□□□ 1.55
AGAP3-222ENST00000490839 TIAM1Q13009 1591 aa24.74■■□□□ 1.55
AGAP3-222ENST00000490839 GGT6Q6P531 493 aa24.73■■□□□ 1.55
AGAP3-222ENST00000490839 EHBP1L1Q8N3D4 1523 aa24.72■■□□□ 1.55
AGAP3-222ENST00000490839 ZNF335Q9H4Z2 1342 aaPredicted RBP24.71■■□□□ 1.55
AGAP3-222ENST00000490839 MBD5Q9P267 1494 aa24.7■■□□□ 1.54
AGAP3-222ENST00000490839 RTEL1-TNFRSF6BF6WH68 1400 aa24.69■■□□□ 1.54
AGAP3-222ENST00000490839 A2ML1A8K2U0 1454 aa24.67■■□□□ 1.54
AGAP3-222ENST00000490839 ZNF644Q9H582 1327 aaPredicted RBP24.66■■□□□ 1.54
AGAP3-222ENST00000490839 CEP162Q5TB80 1403 aa24.66■■□□□ 1.54
AGAP3-222ENST00000490839 DHX29Q7Z478 1369 aaKnown RBP24.64■■□□□ 1.53
AGAP3-222ENST00000490839 DNMT1P26358 1616 aaKnown RBP24.64■■□□□ 1.53
AGAP3-222ENST00000490839 FAM135AQ9P2D6 1515 aa24.63■■□□□ 1.53
AGAP3-222ENST00000490839 UBAP1LF5GYI3 381 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms