RNA–Protein interactions for RNA: ENST00000490530.1

MTM1-205, Transcript of myotubularin 1, humanhuman

TSL 3

Gene MTM1, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTM1-205ENST00000490530 RICTORQ6R327 1708 aa17.54■□□□□ 0.4
MTM1-205ENST00000490530 TOM1O60784 492 aa17.53■□□□□ 0.4
MTM1-205ENST00000490530 ZMYM4Q5VZL5 1548 aa17.52■□□□□ 0.4
MTM1-205ENST00000490530 MAGI2Q86UL8 1455 aa17.52■□□□□ 0.4
MTM1-205ENST00000490530 RGS17Q9UGC6 210 aaPredicted RBP17.49■□□□□ 0.39
MTM1-205ENST00000490530 TRAPPC8Q9Y2L5 1435 aa17.41■□□□□ 0.38
MTM1-205ENST00000490530 CAMSAP1Q5T5Y3 1602 aa17.4■□□□□ 0.38
MTM1-205ENST00000490530 ATP10BO94823 1461 aa17.4■□□□□ 0.38
MTM1-205ENST00000490530 C9orf84Q5VXU9 1444 aa17.39■□□□□ 0.38
MTM1-205ENST00000490530 ATP10AO60312 1499 aa17.39■□□□□ 0.37
MTM1-205ENST00000490530 GOLGA3Q08378 1498 aa17.39■□□□□ 0.37
MTM1-205ENST00000490530 CFAP74Q9C0B2 1584 aa17.38■□□□□ 0.37
MTM1-205ENST00000490530 NCKAP5LQ9HCH0 1330 aa17.38■□□□□ 0.37
MTM1-205ENST00000490530 ARID3CA6NKF2 412 aa17.37■□□□□ 0.37
MTM1-205ENST00000490530 PKD2Q13563 968 aa17.36■□□□□ 0.37
MTM1-205ENST00000490530 HECW1Q76N89 1606 aa17.36■□□□□ 0.37
MTM1-205ENST00000490530 FAM9AQ8IZU1 332 aaPredicted RBP17.35■□□□□ 0.37
MTM1-205ENST00000490530 PTPRKQ15262 1439 aa17.34■□□□□ 0.37
MTM1-205ENST00000490530 C3P01024 1663 aa17.33■□□□□ 0.37
MTM1-205ENST00000490530 POTEAQ6S8J7 498 aa17.33■□□□□ 0.36
MTM1-205ENST00000490530 CPS1P31327 1500 aa17.31■□□□□ 0.36
MTM1-205ENST00000490530 PPP6R1Q9UPN7 881 aa17.3■□□□□ 0.36
MTM1-205ENST00000490530 PLA2R1Q13018 1463 aa17.3■□□□□ 0.36
MTM1-205ENST00000490530 ESF1Q9H501 851 aaKnown RBP17.29■□□□□ 0.36
MTM1-205ENST00000490530 RAPGEF2Q9Y4G8 1499 aa17.27■□□□□ 0.36
MTM1-205ENST00000490530 TCOF1Q13428 1488 aaKnown RBP17.26■□□□□ 0.35
MTM1-205ENST00000490530 UPF1Q92900 1129 aaKnown RBP eCLIP17.25■□□□□ 0.35
MTM1-205ENST00000490530 SETD1AO15047 1707 aaKnown RBP17.24■□□□□ 0.35
MTM1-205ENST00000490530 NPATQ14207 1427 aa17.23■□□□□ 0.35
MTM1-205ENST00000490530 SENP3Q9H4L4 574 aaPredicted RBP17.23■□□□□ 0.35
MTM1-205ENST00000490530 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.22■□□□□ 0.35
MTM1-205ENST00000490530 HNRNPUL2Q1KMD3 747 aaKnown RBP17.22■□□□□ 0.35
MTM1-205ENST00000490530 SCAPERQ9BY12 1400 aa17.21■□□□□ 0.35
MTM1-205ENST00000490530 ALKQ9UM73 1620 aa17.21■□□□□ 0.35
MTM1-205ENST00000490530 CNTLNQ9NXG0 1405 aa17.2■□□□□ 0.34
MTM1-205ENST00000490530 SHANK2Q9UPX8 1470 aa17.19■□□□□ 0.34
MTM1-205ENST00000490530 AGLP35573 1532 aa17.16■□□□□ 0.34
MTM1-205ENST00000490530 REREQ9P2R6 1566 aa17.14■□□□□ 0.33
MTM1-205ENST00000490530 CTTNBP2Q8WZ74 1663 aa17.13■□□□□ 0.33
MTM1-205ENST00000490530 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.13■□□□□ 0.33
MTM1-205ENST00000490530 ZNF142P52746 1687 aaPredicted RBP17.13■□□□□ 0.33
MTM1-205ENST00000490530 PLEKHD1A6NEE1 506 aa17.12■□□□□ 0.33
MTM1-205ENST00000490530 SUPT6HQ7KZ85 1726 aaKnown RBP17.1■□□□□ 0.33
MTM1-205ENST00000490530 CEP170BQ9Y4F5 1589 aaPredicted RBP17.09■□□□□ 0.33
MTM1-205ENST00000490530 ZNF518AQ6AHZ1 1483 aa17.08■□□□□ 0.32
MTM1-205ENST00000490530 RAPGEF6Q8TEU7 1601 aa17.07■□□□□ 0.32
MTM1-205ENST00000490530 MYO3AQ8NEV4 1616 aa17.07■□□□□ 0.32
MTM1-205ENST00000490530 DIP2CQ9Y2E4 1556 aa17.06■□□□□ 0.32
MTM1-205ENST00000490530 MROH2AA6NES4 1674 aa17.05■□□□□ 0.32
MTM1-205ENST00000490530 PLCH2O75038 1416 aa17.04■□□□□ 0.32
MTM1-205ENST00000490530 ZMYM3Q14202 1370 aa17.04■□□□□ 0.32
MTM1-205ENST00000490530 MYT1LQ9UL68 1186 aa17.04■□□□□ 0.32
MTM1-205ENST00000490530 NUP153P49790 1475 aaKnown RBP17.03■□□□□ 0.32
MTM1-205ENST00000490530 RNF17Q9BXT8 1623 aaKnown RBP17.03■□□□□ 0.32
MTM1-205ENST00000490530 KDM5CP41229 1560 aa17.02■□□□□ 0.32
MTM1-205ENST00000490530 VWDEQ8N2E2 1590 aa17.02■□□□□ 0.31
MTM1-205ENST00000490530 P3H3Q8IVL6 736 aa17.01■□□□□ 0.31
MTM1-205ENST00000490530 EFCAB2Q5VUJ9 269 aa17■□□□□ 0.31
MTM1-205ENST00000490530 AFAP1Q8N556 730 aa16.98■□□□□ 0.31
MTM1-205ENST00000490530 NEURL4Q96JN8 1562 aa16.98■□□□□ 0.31
MTM1-205ENST00000490530 ABCA6Q8N139 1617 aa16.96■□□□□ 0.31
MTM1-205ENST00000490530 POLR1AO95602 1720 aaPredicted RBP16.96■□□□□ 0.31
MTM1-205ENST00000490530 LRRC7Q96NW7 1537 aa16.96■□□□□ 0.3
MTM1-205ENST00000490530 A2ML1A8K2U0 1454 aa16.95■□□□□ 0.3
MTM1-205ENST00000490530 MLH3Q9UHC1 1453 aa16.95■□□□□ 0.3
MTM1-205ENST00000490530 FOXD1Q16676 465 aa16.95■□□□□ 0.3
MTM1-205ENST00000490530 TRIM52Q96A61 297 aa16.95■□□□□ 0.3
MTM1-205ENST00000490530 DNMT1P26358 1616 aaKnown RBP16.92■□□□□ 0.3
MTM1-205ENST00000490530 FAM135BQ49AJ0 1406 aa16.92■□□□□ 0.3
MTM1-205ENST00000490530 SYNMO15061 1565 aa16.92■□□□□ 0.3
MTM1-205ENST00000490530 ZNF772Q68DY9 489 aaPredicted RBP16.9■□□□□ 0.3
MTM1-205ENST00000490530 ANKLE2Q86XL3 938 aa16.9■□□□□ 0.3
MTM1-205ENST00000490530 ZRANB1Q9UGI0 708 aa16.9■□□□□ 0.3
MTM1-205ENST00000490530 SUPT5HO00267 1087 aaKnown RBP16.88■□□□□ 0.29
MTM1-205ENST00000490530 IFFO2Q5TF58 517 aa16.88■□□□□ 0.29
MTM1-205ENST00000490530 NPHP4O75161 1426 aaPredicted RBP16.86■□□□□ 0.29
MTM1-205ENST00000490530 MED14O60244 1454 aa16.86■□□□□ 0.29
MTM1-205ENST00000490530 CDK12Q9NYV4 1490 aaPredicted RBP16.85■□□□□ 0.29
MTM1-205ENST00000490530 SAMD9Q5K651 1589 aa16.85■□□□□ 0.29
MTM1-205ENST00000490530 RXRBP28702 533 aa16.84■□□□□ 0.29
MTM1-205ENST00000490530 MYO5CQ9NQX4 1742 aa16.84■□□□□ 0.29
MTM1-205ENST00000490530 CLTCQ00610 1675 aaKnown RBP16.82■□□□□ 0.28
MTM1-205ENST00000490530 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.82■□□□□ 0.28
MTM1-205ENST00000490530 CDK13Q14004 1512 aaKnown RBP16.81■□□□□ 0.28
MTM1-205ENST00000490530 RBM33Q96EV2 1170 aaKnown RBP16.81■□□□□ 0.28
MTM1-205ENST00000490530 STRCP1A6NGW2 1772 aa16.8■□□□□ 0.28
MTM1-205ENST00000490530 DEPDC5O75140 1603 aa16.8■□□□□ 0.28
MTM1-205ENST00000490530 JCADQ9P266 1359 aa16.79■□□□□ 0.28
MTM1-205ENST00000490530 ARHGAP5Q13017 1502 aa16.79■□□□□ 0.28
MTM1-205ENST00000490530 SETBP1Q9Y6X0 1596 aa16.78■□□□□ 0.28
MTM1-205ENST00000490530 THEMISQ8N1K5 641 aaPredicted RBP16.77■□□□□ 0.28
MTM1-205ENST00000490530 IQGAP1P46940 1657 aa16.76■□□□□ 0.27
MTM1-205ENST00000490530 ABCC1P33527 1531 aa16.75■□□□□ 0.27
MTM1-205ENST00000490530 MEX3CQ5U5Q3 659 aaKnown RBP16.75■□□□□ 0.27
MTM1-205ENST00000490530 KIDINS220Q9ULH0 1771 aa16.74■□□□□ 0.27
MTM1-205ENST00000490530 PRXQ9BXM0 1461 aa16.73■□□□□ 0.27
MTM1-205ENST00000490530 ROBO1Q9Y6N7 1651 aa16.72■□□□□ 0.27
MTM1-205ENST00000490530 TNRQ92752 1358 aa16.72■□□□□ 0.27
MTM1-205ENST00000490530 SPATA31A6Q5VVP1 1343 aa16.7■□□□□ 0.26
MTM1-205ENST00000490530 KDM5DQ9BY66 1539 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms