RNA–Protein interactions for RNA: ENST00000490299.5

RPS6KC1-204, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best)

Gene RPS6KC1, Length 5,154 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-204ENST00000490299 RBM19Q9Y4C8 960 aaKnown RBP4.77□□□□□ -1.65
RPS6KC1-204ENST00000490299 HSP90AB1P08238 724 aaKnown RBP4.76□□□□□ -1.65
RPS6KC1-204ENST00000490299 TMX4Q9H1E5 349 aaPredicted RBP4.76□□□□□ -1.65
RPS6KC1-204ENST00000490299 KNSTRNQ9Y448 316 aa4.76□□□□□ -1.65
RPS6KC1-204ENST00000490299 ARHGAP35Q9NRY4 1499 aa4.76□□□□□ -1.65
RPS6KC1-204ENST00000490299 GBP4Q96PP9 640 aa4.75□□□□□ -1.65
RPS6KC1-204ENST00000490299 RSPH6AQ9H0K4 717 aa4.75□□□□□ -1.65
RPS6KC1-204ENST00000490299 PODXL2Q9NZ53 605 aa4.75□□□□□ -1.65
RPS6KC1-204ENST00000490299 SALL2Q9Y467 1007 aaPredicted RBP4.75□□□□□ -1.65
RPS6KC1-204ENST00000490299 LAS1LQ9Y4W2 734 aaKnown RBP4.75□□□□□ -1.65
RPS6KC1-204ENST00000490299 MCCP23508 829 aa4.75□□□□□ -1.65
RPS6KC1-204ENST00000490299 KLHL34Q8N239 644 aa4.75□□□□□ -1.65
RPS6KC1-204ENST00000490299 CHIC2Q9UKJ5 165 aa4.75□□□□□ -1.65
RPS6KC1-204ENST00000490299 NUDCQ9Y266 331 aa4.75□□□□□ -1.65
RPS6KC1-204ENST00000490299 PHLDB1Q86UU1 1377 aa4.75□□□□□ -1.65
RPS6KC1-204ENST00000490299 ERCC6Q03468 1493 aa4.74□□□□□ -1.65
RPS6KC1-204ENST00000490299 MROH2BQ7Z745 1585 aa4.74□□□□□ -1.65
RPS6KC1-204ENST00000490299 ROCK2O75116 1388 aaKnown RBP4.74□□□□□ -1.65
RPS6KC1-204ENST00000490299 DNMBPQ6XZF7 1577 aa4.74□□□□□ -1.65
RPS6KC1-204ENST00000490299 MAPK8IP3Q9UPT6 1336 aa4.74□□□□□ -1.65
RPS6KC1-204ENST00000490299 CARD11Q9BXL7 1154 aa4.74□□□□□ -1.65
RPS6KC1-204ENST00000490299 SYAP1Q96A49 352 aaPredicted RBP4.73□□□□□ -1.65
RPS6KC1-204ENST00000490299 IPO9Q96P70 1041 aaKnown RBP4.73□□□□□ -1.65
RPS6KC1-204ENST00000490299 KTN1Q86UP2 1357 aaKnown RBP4.73□□□□□ -1.65
RPS6KC1-204ENST00000490299 PPP1R15AO75807 674 aaPredicted RBP4.73□□□□□ -1.65
RPS6KC1-204ENST00000490299 RALBP1Q15311 655 aa4.73□□□□□ -1.65
RPS6KC1-204ENST00000490299 CHGAP10645 457 aaKnown RBP4.73□□□□□ -1.65
RPS6KC1-204ENST00000490299 KDM2AQ9Y2K7 1162 aa4.72□□□□□ -1.65
RPS6KC1-204ENST00000490299 AQRO60306 1485 aaKnown RBP eCLIP4.72□□□□□ -1.65
RPS6KC1-204ENST00000490299 CFTRP13569 1480 aa4.72□□□□□ -1.65
RPS6KC1-204ENST00000490299 TMF1P82094 1093 aa4.72□□□□□ -1.65
RPS6KC1-204ENST00000490299 PDE3BQ13370 1112 aa4.72□□□□□ -1.65
RPS6KC1-204ENST00000490299 TSHZ2Q9NRE2 1034 aa4.72□□□□□ -1.65
RPS6KC1-204ENST00000490299 FANCIQ9NVI1 1328 aa4.72□□□□□ -1.65
RPS6KC1-204ENST00000490299 GOLGA6L3A6NEY3 463 aa4.71□□□□□ -1.65
RPS6KC1-204ENST00000490299 ARID3CA6NKF2 412 aa4.71□□□□□ -1.65
RPS6KC1-204ENST00000490299 HTATSF1O43719 755 aaKnown RBP4.71□□□□□ -1.65
RPS6KC1-204ENST00000490299 KIAA2012Q0VF49 1180 aa4.71□□□□□ -1.65
RPS6KC1-204ENST00000490299 PMFBP1Q8TBY8 1022 aa4.71□□□□□ -1.65
RPS6KC1-204ENST00000490299 WIZO95785 1651 aa4.71□□□□□ -1.65
RPS6KC1-204ENST00000490299 CSPP1Q1MSJ5 1256 aa4.71□□□□□ -1.66
RPS6KC1-204ENST00000490299 RRP7BPQ9NSQ0 103 aa4.71□□□□□ -1.66
RPS6KC1-204ENST00000490299 DDX11L8A8MPP1 907 aa4.7□□□□□ -1.66
RPS6KC1-204ENST00000490299 EIF3AQ14152 1382 aaKnown RBP4.7□□□□□ -1.66
RPS6KC1-204ENST00000490299 PLEKHD1A6NEE1 506 aa4.7□□□□□ -1.66
RPS6KC1-204ENST00000490299 NEUROD2Q15784 382 aa4.7□□□□□ -1.66
RPS6KC1-204ENST00000490299 KANK1Q14678 1352 aa4.7□□□□□ -1.66
RPS6KC1-204ENST00000490299 CALD1Q05682 793 aaKnown RBP4.7□□□□□ -1.66
RPS6KC1-204ENST00000490299 PHF14O94880 888 aa4.7□□□□□ -1.66
RPS6KC1-204ENST00000490299 B4GALNT3Q6L9W6 998 aa4.7□□□□□ -1.66
RPS6KC1-204ENST00000490299 RWDD1Q9H446 243 aaPredicted RBP4.7□□□□□ -1.66
RPS6KC1-204ENST00000490299 IPO8O15397 1037 aaKnown RBP4.69□□□□□ -1.66
RPS6KC1-204ENST00000490299 FMN1Q68DA7 1419 aa4.69□□□□□ -1.66
RPS6KC1-204ENST00000490299 PDS5BQ9NTI5 1447 aa4.69□□□□□ -1.66
RPS6KC1-204ENST00000490299 RGS3P49796 1198 aa4.69□□□□□ -1.66
RPS6KC1-204ENST00000490299 SKOR2Q2VWA4 1001 aaPredicted RBP4.69□□□□□ -1.66
RPS6KC1-204ENST00000490299 GOLGA6L4A6NEF3 574 aa4.69□□□□□ -1.66
RPS6KC1-204ENST00000490299 TPM4P67936 248 aa4.69□□□□□ -1.66
RPS6KC1-204ENST00000490299 CFDP1Q9UEE9 299 aaPredicted RBP4.68□□□□□ -1.66
RPS6KC1-204ENST00000490299 RCAN3Q9UKA8 241 aa4.68□□□□□ -1.66
RPS6KC1-204ENST00000490299 CCDC88BA6NC98 1476 aa4.68□□□□□ -1.66
RPS6KC1-204ENST00000490299 HIRIP3Q9BW71 556 aaPredicted RBP4.68□□□□□ -1.66
RPS6KC1-204ENST00000490299 HSPA5P11021 654 aaKnown RBP4.68□□□□□ -1.66
RPS6KC1-204ENST00000490299 CHMP4AQ9BY43 222 aa4.68□□□□□ -1.66
RPS6KC1-204ENST00000490299 PLEKHG5O94827 1062 aa4.67□□□□□ -1.66
RPS6KC1-204ENST00000490299 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.67□□□□□ -1.66
RPS6KC1-204ENST00000490299 LMOD2Q6P5Q4 547 aa4.67□□□□□ -1.66
RPS6KC1-204ENST00000490299 CTTNBP2Q8WZ74 1663 aa4.67□□□□□ -1.66
RPS6KC1-204ENST00000490299 RAB3GAP2Q9H2M9 1393 aa4.67□□□□□ -1.66
RPS6KC1-204ENST00000490299 KIF15Q9NS87 1388 aa4.67□□□□□ -1.66
RPS6KC1-204ENST00000490299 DRC7Q8IY82 874 aa4.67□□□□□ -1.66
RPS6KC1-204ENST00000490299 C16orf71Q8IYS4 520 aaPredicted RBP4.67□□□□□ -1.66
RPS6KC1-204ENST00000490299 CUX1P39880 1505 aa4.67□□□□□ -1.66
RPS6KC1-204ENST00000490299 ZBTB7CA1YPR0 619 aa4.67□□□□□ -1.66
RPS6KC1-204ENST00000490299 ZNF710Q8N1W2 664 aa4.66□□□□□ -1.66
RPS6KC1-204ENST00000490299 FRAT1Q92837 279 aaPredicted RBP4.66□□□□□ -1.66
RPS6KC1-204ENST00000490299 CCDC18Q5T9S5 1454 aa4.66□□□□□ -1.66
RPS6KC1-204ENST00000490299 HSP90AA2PQ14568 343 aaPredicted RBP4.66□□□□□ -1.66
RPS6KC1-204ENST00000490299 CENPQQ7L2Z9 268 aaPredicted RBP4.66□□□□□ -1.66
RPS6KC1-204ENST00000490299 GOLGA2Q08379 1002 aa4.66□□□□□ -1.66
RPS6KC1-204ENST00000490299 SIN3AQ96ST3 1273 aa4.66□□□□□ -1.66
RPS6KC1-204ENST00000490299 CARMIL1Q5VZK9 1371 aa4.66□□□□□ -1.66
RPS6KC1-204ENST00000490299 PLCB2Q00722 1185 aa4.65□□□□□ -1.66
RPS6KC1-204ENST00000490299 GOLGA6L1Q8N7Z2 621 aa4.65□□□□□ -1.66
RPS6KC1-204ENST00000490299 IL27Q8NEV9 243 aa4.65□□□□□ -1.66
RPS6KC1-204ENST00000490299 HDGFP51858 240 aaKnown RBP4.65□□□□□ -1.66
RPS6KC1-204ENST00000490299 AAMPQ13685 434 aa4.65□□□□□ -1.66
RPS6KC1-204ENST00000490299 GSE1Q14687 1217 aa4.65□□□□□ -1.66
RPS6KC1-204ENST00000490299 ZBED9Q6R2W3 1325 aa4.65□□□□□ -1.66
RPS6KC1-204ENST00000490299 MSH5O43196 834 aa4.65□□□□□ -1.67
RPS6KC1-204ENST00000490299 MTERF4Q7Z6M4 381 aaKnown RBP4.65□□□□□ -1.67
RPS6KC1-204ENST00000490299 NGEFQ8N5V2 710 aa4.65□□□□□ -1.67
RPS6KC1-204ENST00000490299 CHMP4CQ96CF2 233 aa4.65□□□□□ -1.67
RPS6KC1-204ENST00000490299 TNNT3P45378 269 aaPredicted RBP4.65□□□□□ -1.67
RPS6KC1-204ENST00000490299 SOGA1O94964 1423 aa4.64□□□□□ -1.67
RPS6KC1-204ENST00000490299 SETQ01105 290 aaPredicted RBP4.64□□□□□ -1.67
RPS6KC1-204ENST00000490299 CCDC34Q96HJ3 373 aa4.64□□□□□ -1.67
RPS6KC1-204ENST00000490299 CUX2O14529 1486 aa4.64□□□□□ -1.67
RPS6KC1-204ENST00000490299 KCNJ4P48050 445 aa4.64□□□□□ -1.67
RPS6KC1-204ENST00000490299 CC2D1BQ5T0F9 858 aaKnown RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms