RNA–Protein interactions for RNA: ENST00000490077.5

TNXB-206, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,756 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-206ENST00000490077 PRG4Q92954 1404 aaPredicted RBP18.54■□□□□ 0.56
TNXB-206ENST00000490077 RBM19Q9Y4C8 960 aaKnown RBP18.53■□□□□ 0.56
TNXB-206ENST00000490077 ARHGEF11O15085 1522 aa18.52■□□□□ 0.56
TNXB-206ENST00000490077 EIF4G2P78344 907 aaKnown RBP eCLIP18.52■□□□□ 0.55
TNXB-206ENST00000490077 EHBP1L1Q8N3D4 1523 aa18.52■□□□□ 0.55
TNXB-206ENST00000490077 IQGAP2Q13576 1575 aa18.52■□□□□ 0.55
TNXB-206ENST00000490077 NEFLP07196 543 aa18.49■□□□□ 0.55
TNXB-206ENST00000490077 ABCC5O15440 1437 aa18.49■□□□□ 0.55
TNXB-206ENST00000490077 GRIN2AQ12879 1464 aa18.47■□□□□ 0.55
TNXB-206ENST00000490077 PLB1Q6P1J6 1458 aa18.46■□□□□ 0.55
TNXB-206ENST00000490077 KIF7Q2M1P5 1343 aa18.46■□□□□ 0.55
TNXB-206ENST00000490077 MAGI1Q96QZ7 1491 aaPredicted RBP18.45■□□□□ 0.54
TNXB-206ENST00000490077 ANKRD30BQ9BXX2 1392 aa18.45■□□□□ 0.54
TNXB-206ENST00000490077 MSH5O43196 834 aa18.45■□□□□ 0.54
TNXB-206ENST00000490077 PRKRIP1Q9H875 184 aaPredicted RBP18.45■□□□□ 0.54
TNXB-206ENST00000490077 MRS2Q9HD23 443 aa18.45■□□□□ 0.54
TNXB-206ENST00000490077 DISP1Q96F81 1524 aa18.45■□□□□ 0.54
TNXB-206ENST00000490077 NUP153P49790 1475 aaKnown RBP18.44■□□□□ 0.54
TNXB-206ENST00000490077 KDM2AQ9Y2K7 1162 aa18.44■□□□□ 0.54
TNXB-206ENST00000490077 CHMP7Q8WUX9 453 aaPredicted RBP18.43■□□□□ 0.54
TNXB-206ENST00000490077 DAPK1P53355 1430 aa18.43■□□□□ 0.54
TNXB-206ENST00000490077 CFDP1Q9UEE9 299 aaPredicted RBP18.42■□□□□ 0.54
TNXB-206ENST00000490077 TCOF1Q13428 1488 aaKnown RBP18.42■□□□□ 0.54
TNXB-206ENST00000490077 B4GALNT3Q6L9W6 998 aa18.42■□□□□ 0.54
TNXB-206ENST00000490077 KIAA0586Q9BVV6 1533 aa18.42■□□□□ 0.54
TNXB-206ENST00000490077 CCDC7Q96M83 1385 aa18.42■□□□□ 0.54
TNXB-206ENST00000490077 SYNJ2O15056 1496 aa18.41■□□□□ 0.54
TNXB-206ENST00000490077 PKD2Q13563 968 aa18.41■□□□□ 0.54
TNXB-206ENST00000490077 HECW1Q76N89 1606 aa18.38■□□□□ 0.53
TNXB-206ENST00000490077 CEP170Q5SW79 1584 aa18.36■□□□□ 0.53
TNXB-206ENST00000490077 HNRNPMP52272 730 aaKnown RBP eCLIP18.36■□□□□ 0.53
TNXB-206ENST00000490077 ANP32EQ9BTT0 268 aa18.35■□□□□ 0.53
TNXB-206ENST00000490077 SALL2Q9Y467 1007 aaPredicted RBP18.35■□□□□ 0.53
TNXB-206ENST00000490077 CNTLNQ9NXG0 1405 aa18.34■□□□□ 0.53
TNXB-206ENST00000490077 TEX14Q8IWB6 1497 aa18.34■□□□□ 0.53
TNXB-206ENST00000490077 NCOA1Q15788 1441 aa18.33■□□□□ 0.53
TNXB-206ENST00000490077 KIAA0556O60303 1618 aa18.33■□□□□ 0.52
TNXB-206ENST00000490077 KIF14Q15058 1648 aa18.32■□□□□ 0.52
TNXB-206ENST00000490077 JPH4Q96JJ6 628 aa18.32■□□□□ 0.52
TNXB-206ENST00000490077 PZPP20742 1482 aa18.32■□□□□ 0.52
TNXB-206ENST00000490077 GCC2Q8IWJ2 1684 aa18.32■□□□□ 0.52
TNXB-206ENST00000490077 MIA2Q96PC5 1412 aa18.31■□□□□ 0.52
TNXB-206ENST00000490077 RPRD2Q5VT52 1461 aaKnown RBP18.31■□□□□ 0.52
TNXB-206ENST00000490077 SPATA31E1Q6ZUB1 1445 aa18.3■□□□□ 0.52
TNXB-206ENST00000490077 NUP160Q12769 1436 aa18.29■□□□□ 0.52
TNXB-206ENST00000490077 AKNAQ7Z591 1439 aa18.27■□□□□ 0.52
TNXB-206ENST00000490077 RGL3Q3MIN7 710 aa18.27■□□□□ 0.52
TNXB-206ENST00000490077 GPATCH8Q9UKJ3 1502 aaKnown RBP18.27■□□□□ 0.52
TNXB-206ENST00000490077 CAMSAP2Q08AD1 1489 aa18.26■□□□□ 0.51
TNXB-206ENST00000490077 ST20-MTHFSA0A0A6YYL1 179 aa18.24■□□□□ 0.51
TNXB-206ENST00000490077 BCORL1Q5H9F3 1711 aa18.24■□□□□ 0.51
TNXB-206ENST00000490077 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.24■□□□□ 0.51
TNXB-206ENST00000490077 DCAF11Q8TEB1 546 aa18.23■□□□□ 0.51
TNXB-206ENST00000490077 NUP155O75694 1391 aa18.23■□□□□ 0.51
TNXB-206ENST00000490077 DHX29Q7Z478 1369 aaKnown RBP18.23■□□□□ 0.51
TNXB-206ENST00000490077 USP47Q96K76 1375 aa18.23■□□□□ 0.51
TNXB-206ENST00000490077 CDK11AQ9UQ88 783 aaPredicted RBP18.22■□□□□ 0.51
TNXB-206ENST00000490077 DNMT1P26358 1616 aaKnown RBP18.22■□□□□ 0.51
TNXB-206ENST00000490077 NBPF1Q3BBV0 1214 aa18.21■□□□□ 0.51
TNXB-206ENST00000490077 RAPGEF6Q8TEU7 1601 aa18.21■□□□□ 0.51
TNXB-206ENST00000490077 TROQ12816 1431 aaPredicted RBP18.2■□□□□ 0.5
TNXB-206ENST00000490077 ROCK1Q13464 1354 aa18.2■□□□□ 0.5
TNXB-206ENST00000490077 CARD11Q9BXL7 1154 aa18.19■□□□□ 0.5
TNXB-206ENST00000490077 CARMIL2Q6F5E8 1435 aa18.17■□□□□ 0.5
TNXB-206ENST00000490077 PLEKHD1A6NEE1 506 aa18.17■□□□□ 0.5
TNXB-206ENST00000490077 SKAP1Q86WV1 359 aa18.17■□□□□ 0.5
TNXB-206ENST00000490077 ANKRD50Q9ULJ7 1429 aa18.16■□□□□ 0.5
TNXB-206ENST00000490077 CHD1O14646 1710 aa18.16■□□□□ 0.5
TNXB-206ENST00000490077 KIAA1107Q9UPP5 1409 aa18.14■□□□□ 0.49
TNXB-206ENST00000490077 ZBED9Q6R2W3 1325 aa18.14■□□□□ 0.49
TNXB-206ENST00000490077 ATP10BO94823 1461 aa18.13■□□□□ 0.49
TNXB-206ENST00000490077 PPP4R2Q9NY27 417 aa18.11■□□□□ 0.49
TNXB-206ENST00000490077 PNISRQ8TF01 805 aaKnown RBP18.1■□□□□ 0.49
TNXB-206ENST00000490077 ANKRD30AQ9BXX3 1397 aa18.08■□□□□ 0.49
TNXB-206ENST00000490077 MBD5Q9P267 1494 aa18.08■□□□□ 0.48
TNXB-206ENST00000490077 C9orf84Q5VXU9 1444 aa18.08■□□□□ 0.48
TNXB-206ENST00000490077 TSPY4P0CV99 314 aa18.08■□□□□ 0.48
TNXB-206ENST00000490077 TSPY10P0CW01 314 aa18.08■□□□□ 0.48
TNXB-206ENST00000490077 TMC1Q8TDI8 760 aa18.08■□□□□ 0.48
TNXB-206ENST00000490077 CC2D1BQ5T0F9 858 aaKnown RBP18.07■□□□□ 0.48
TNXB-206ENST00000490077 CDCA7LQ96GN5 454 aa18.07■□□□□ 0.48
TNXB-206ENST00000490077 KIF15Q9NS87 1388 aa18.06■□□□□ 0.48
TNXB-206ENST00000490077 PAK3O75914 559 aaPredicted RBP18.05■□□□□ 0.48
TNXB-206ENST00000490077 MYT1Q01538 1121 aa18.05■□□□□ 0.48
TNXB-206ENST00000490077 PLIN1O60240 522 aa18.02■□□□□ 0.48
TNXB-206ENST00000490077 ABCA8O94911 1581 aa18.02■□□□□ 0.48
TNXB-206ENST00000490077 ABCC10Q5T3U5 1492 aa18.02■□□□□ 0.48
TNXB-206ENST00000490077 PTPRGP23470 1445 aa18■□□□□ 0.47
TNXB-206ENST00000490077 CDC42BPAQ5VT25 1732 aa18■□□□□ 0.47
TNXB-206ENST00000490077 KDM5CP41229 1560 aa17.99■□□□□ 0.47
TNXB-206ENST00000490077 NUDCQ9Y266 331 aa17.99■□□□□ 0.47
TNXB-206ENST00000490077 ROCK2O75116 1388 aaKnown RBP17.99■□□□□ 0.47
TNXB-206ENST00000490077 EXOC6Q8TAG9 804 aa17.98■□□□□ 0.47
TNXB-206ENST00000490077 SHROOM2Q13796 1616 aa17.97■□□□□ 0.47
TNXB-206ENST00000490077 ERCC6L2Q5T890 1561 aa17.97■□□□□ 0.47
TNXB-206ENST00000490077 SENP3Q9H4L4 574 aaPredicted RBP17.96■□□□□ 0.47
TNXB-206ENST00000490077 ADGRL2O95490 1459 aa17.96■□□□□ 0.47
TNXB-206ENST00000490077 PLA2R1Q13018 1463 aa17.96■□□□□ 0.46
TNXB-206ENST00000490077 CCDC136Q96JN2 1154 aa17.95■□□□□ 0.46
TNXB-206ENST00000490077 DISP3Q9P2K9 1392 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms