RNA–Protein interactions for RNA: ENST00000490008.1

COMMD2-206, Transcript of COMM domain containing 2, humanhuman

TSL 2

Gene COMMD2, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-206ENST00000490008 GPATCH8Q9UKJ3 1502 aaKnown RBP22.06■■□□□ 1.12
COMMD2-206ENST00000490008 RAPGEF3O95398 923 aa22.04■■□□□ 1.12
COMMD2-206ENST00000490008 MYT1LQ9UL68 1186 aa22.02■■□□□ 1.12
COMMD2-206ENST00000490008 SUPT6HQ7KZ85 1726 aaKnown RBP22.01■■□□□ 1.11
COMMD2-206ENST00000490008 SCAPERQ9BY12 1400 aa22■■□□□ 1.11
COMMD2-206ENST00000490008 HNRNPMP52272 730 aaKnown RBP eCLIP22■■□□□ 1.11
COMMD2-206ENST00000490008 ARAP3Q8WWN8 1544 aa21.99■■□□□ 1.11
COMMD2-206ENST00000490008 ZNF644Q9H582 1327 aaPredicted RBP21.99■■□□□ 1.11
COMMD2-206ENST00000490008 PPRC1Q5VV67 1664 aaKnown RBP21.98■■□□□ 1.11
COMMD2-206ENST00000490008 DENND4BO75064 1496 aaPredicted RBP21.96■■□□□ 1.11
COMMD2-206ENST00000490008 ADGRL1O94910 1474 aa21.96■■□□□ 1.11
COMMD2-206ENST00000490008 AFAP1Q8N556 730 aa21.96■■□□□ 1.11
COMMD2-206ENST00000490008 MYO5CQ9NQX4 1742 aa21.96■■□□□ 1.11
COMMD2-206ENST00000490008 COL17A1Q9UMD9 1497 aaPredicted RBP21.96■■□□□ 1.11
COMMD2-206ENST00000490008 KDM6BO15054 1643 aa21.95■■□□□ 1.1
COMMD2-206ENST00000490008 RSPH4AQ5TD94 716 aa21.94■■□□□ 1.1
COMMD2-206ENST00000490008 MYOM3Q5VTT5 1437 aa21.94■■□□□ 1.1
COMMD2-206ENST00000490008 CFAP74Q9C0B2 1584 aa21.93■■□□□ 1.1
COMMD2-206ENST00000490008 FAM50AQ14320 339 aaKnown RBP21.92■■□□□ 1.1
COMMD2-206ENST00000490008 PLEKHH2Q8IVE3 1493 aa21.91■■□□□ 1.1
COMMD2-206ENST00000490008 MIA2Q96PC5 1412 aa21.91■■□□□ 1.1
COMMD2-206ENST00000490008 TSPY4P0CV99 314 aa21.9■■□□□ 1.1
COMMD2-206ENST00000490008 TSPY10P0CW01 314 aa21.9■■□□□ 1.1
COMMD2-206ENST00000490008 PREX2Q70Z35 1606 aa21.9■■□□□ 1.1
COMMD2-206ENST00000490008 CDC42BPBQ9Y5S2 1711 aa21.89■■□□□ 1.09
COMMD2-206ENST00000490008 KIAA1107Q9UPP5 1409 aa21.89■■□□□ 1.09
COMMD2-206ENST00000490008 CDC42BPAQ5VT25 1732 aa21.88■■□□□ 1.09
COMMD2-206ENST00000490008 SPAG9O60271 1321 aaKnown RBP21.85■■□□□ 1.09
COMMD2-206ENST00000490008 ITSN2Q9NZM3 1697 aa21.85■■□□□ 1.09
COMMD2-206ENST00000490008 FGD6Q6ZV73 1430 aa21.84■■□□□ 1.09
COMMD2-206ENST00000490008 TRAPPC8Q9Y2L5 1435 aa21.84■■□□□ 1.09
COMMD2-206ENST00000490008 POGZQ7Z3K3 1410 aa21.83■■□□□ 1.09
COMMD2-206ENST00000490008 ZNF518AQ6AHZ1 1483 aa21.83■■□□□ 1.08
COMMD2-206ENST00000490008 ARHGEF12Q9NZN5 1544 aa21.82■■□□□ 1.08
COMMD2-206ENST00000490008 CAMSAP2Q08AD1 1489 aa21.81■■□□□ 1.08
COMMD2-206ENST00000490008 SAMD9LQ8IVG5 1584 aa21.8■■□□□ 1.08
COMMD2-206ENST00000490008 ABCC1P33527 1531 aa21.79■■□□□ 1.08
COMMD2-206ENST00000490008 SYCP2Q9BX26 1530 aa21.78■■□□□ 1.08
COMMD2-206ENST00000490008 ARID4BQ4LE39 1312 aaPredicted RBP21.78■■□□□ 1.08
COMMD2-206ENST00000490008 ITGAEP38570 1179 aa21.77■■□□□ 1.08
COMMD2-206ENST00000490008 MBD5Q9P267 1494 aa21.77■■□□□ 1.07
COMMD2-206ENST00000490008 MAGI2Q86UL8 1455 aa21.76■■□□□ 1.07
COMMD2-206ENST00000490008 CHIC2Q9UKJ5 165 aa21.74■■□□□ 1.07
COMMD2-206ENST00000490008 CCDC141Q6ZP82 1450 aa21.72■■□□□ 1.07
COMMD2-206ENST00000490008 PTPN23Q9H3S7 1636 aa21.72■■□□□ 1.07
COMMD2-206ENST00000490008 MLH3Q9UHC1 1453 aa21.71■■□□□ 1.07
COMMD2-206ENST00000490008 TCOF1Q13428 1488 aaKnown RBP21.71■■□□□ 1.07
COMMD2-206ENST00000490008 YEATS2Q9ULM3 1422 aa21.7■■□□□ 1.06
COMMD2-206ENST00000490008 RICTORQ6R327 1708 aa21.69■■□□□ 1.06
COMMD2-206ENST00000490008 RTEL1-TNFRSF6BF6WH68 1400 aa21.68■■□□□ 1.06
COMMD2-206ENST00000490008 ATP10AO60312 1499 aa21.68■■□□□ 1.06
COMMD2-206ENST00000490008 FRMPD1Q5SYB0 1578 aa21.68■■□□□ 1.06
COMMD2-206ENST00000490008 ZFYVE16Q7Z3T8 1539 aa21.67■■□□□ 1.06
COMMD2-206ENST00000490008 ABCC5O15440 1437 aa21.67■■□□□ 1.06
COMMD2-206ENST00000490008 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.67■■□□□ 1.06
COMMD2-206ENST00000490008 RRP7BPQ9NSQ0 103 aa21.67■■□□□ 1.06
COMMD2-206ENST00000490008 ZMYM4Q5VZL5 1548 aa21.66■■□□□ 1.06
COMMD2-206ENST00000490008 KDM5CP41229 1560 aa21.65■■□□□ 1.06
COMMD2-206ENST00000490008 ARHGEF5Q12774 1597 aa21.65■■□□□ 1.06
COMMD2-206ENST00000490008 DAPK1P53355 1430 aa21.64■■□□□ 1.06
COMMD2-206ENST00000490008 MLECQ14165 292 aa21.64■■□□□ 1.05
COMMD2-206ENST00000490008 C9orf84Q5VXU9 1444 aa21.63■■□□□ 1.05
COMMD2-206ENST00000490008 RRBP1Q9P2E9 1410 aaKnown RBP21.63■■□□□ 1.05
COMMD2-206ENST00000490008 ANKRD30AQ9BXX3 1397 aa21.61■■□□□ 1.05
COMMD2-206ENST00000490008 HECW2Q9P2P5 1572 aa21.61■■□□□ 1.05
COMMD2-206ENST00000490008 ATP7AQ04656 1500 aa21.6■■□□□ 1.05
COMMD2-206ENST00000490008 ESF1Q9H501 851 aaKnown RBP21.59■■□□□ 1.05
COMMD2-206ENST00000490008 DHX29Q7Z478 1369 aaKnown RBP21.59■■□□□ 1.05
COMMD2-206ENST00000490008 KIF3BO15066 747 aa21.57■■□□□ 1.04
COMMD2-206ENST00000490008 GGT6Q6P531 493 aa21.57■■□□□ 1.04
COMMD2-206ENST00000490008 A2MP01023 1474 aa21.56■■□□□ 1.04
COMMD2-206ENST00000490008 ARHGEF40Q8TER5 1519 aa21.55■■□□□ 1.04
COMMD2-206ENST00000490008 SHANK2Q9UPX8 1470 aa21.54■■□□□ 1.04
COMMD2-206ENST00000490008 KIF15Q9NS87 1388 aa21.54■■□□□ 1.04
COMMD2-206ENST00000490008 DNMT1P26358 1616 aaKnown RBP21.54■■□□□ 1.04
COMMD2-206ENST00000490008 KIDINS220Q9ULH0 1771 aa21.53■■□□□ 1.04
COMMD2-206ENST00000490008 NCOA1Q15788 1441 aa21.53■■□□□ 1.04
COMMD2-206ENST00000490008 PTPRKQ15262 1439 aa21.52■■□□□ 1.04
COMMD2-206ENST00000490008 DIP2CQ9Y2E4 1556 aa21.52■■□□□ 1.04
COMMD2-206ENST00000490008 INO80Q9ULG1 1556 aaPredicted RBP21.5■■□□□ 1.03
COMMD2-206ENST00000490008 MAST1Q9Y2H9 1570 aa21.5■■□□□ 1.03
COMMD2-206ENST00000490008 KDM4FA0A1W2PPD8 638 aa21.5■■□□□ 1.03
COMMD2-206ENST00000490008 ROCK1Q13464 1354 aa21.48■■□□□ 1.03
COMMD2-206ENST00000490008 ABCA6Q8N139 1617 aa21.48■■□□□ 1.03
COMMD2-206ENST00000490008 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.48■■□□□ 1.03
COMMD2-206ENST00000490008 PPP6R1Q9UPN7 881 aa21.48■■□□□ 1.03
COMMD2-206ENST00000490008 DUOX2Q9NRD8 1548 aa21.45■■□□□ 1.02
COMMD2-206ENST00000490008 PLPPR3Q6T4P5 718 aa21.44■■□□□ 1.02
COMMD2-206ENST00000490008 WASHC2CQ9Y4E1 1318 aa21.44■■□□□ 1.02
COMMD2-206ENST00000490008 ADGRL2O95490 1459 aa21.44■■□□□ 1.02
COMMD2-206ENST00000490008 AGLP35573 1532 aa21.44■■□□□ 1.02
COMMD2-206ENST00000490008 REREQ9P2R6 1566 aa21.43■■□□□ 1.02
COMMD2-206ENST00000490008 ANKRD50Q9ULJ7 1429 aa21.42■■□□□ 1.02
COMMD2-206ENST00000490008 ADGBQ8N7X0 1667 aa21.41■■□□□ 1.02
COMMD2-206ENST00000490008 TRIM26Q12899 539 aaPredicted RBP21.41■■□□□ 1.02
COMMD2-206ENST00000490008 ERBINQ96RT1 1412 aa21.39■■□□□ 1.02
COMMD2-206ENST00000490008 PLXNC1O60486 1568 aa21.39■■□□□ 1.01
COMMD2-206ENST00000490008 KANK1Q14678 1352 aa21.38■■□□□ 1.01
COMMD2-206ENST00000490008 CROCC2H7BZ55 1655 aa21.38■■□□□ 1.01
COMMD2-206ENST00000490008 TRIM52Q96A61 297 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms