RNA–Protein interactions for RNA: ENST00000489555.1

PRUNE2-213, Transcript of prune homolog 2, humanhuman

TSL 3

Gene PRUNE2, Length 635 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2-213ENST00000489555 HNRNPUL2Q1KMD3 747 aaKnown RBP12.72□□□□□ -0.37
PRUNE2-213ENST00000489555 SOCS7O14512 581 aa12.71□□□□□ -0.37
PRUNE2-213ENST00000489555 DMRT2Q9Y5R5 561 aa12.71□□□□□ -0.37
PRUNE2-213ENST00000489555 ATP10AO60312 1499 aa12.71□□□□□ -0.38
PRUNE2-213ENST00000489555 C9orf84Q5VXU9 1444 aa12.71□□□□□ -0.38
PRUNE2-213ENST00000489555 SPATA31D1Q6ZQQ2 1576 aa12.69□□□□□ -0.38
PRUNE2-213ENST00000489555 REREQ9P2R6 1566 aa12.69□□□□□ -0.38
PRUNE2-213ENST00000489555 DISP3Q9P2K9 1392 aa12.69□□□□□ -0.38
PRUNE2-213ENST00000489555 IQSEC2Q5JU85 1478 aa12.68□□□□□ -0.38
PRUNE2-213ENST00000489555 PLCH2O75038 1416 aa12.68□□□□□ -0.38
PRUNE2-213ENST00000489555 EEA1Q15075 1411 aa12.67□□□□□ -0.38
PRUNE2-213ENST00000489555 KDM5CP41229 1560 aa12.67□□□□□ -0.38
PRUNE2-213ENST00000489555 UHRF1BP1Q6BDS2 1440 aa12.66□□□□□ -0.38
PRUNE2-213ENST00000489555 SCAPERQ9BY12 1400 aa12.66□□□□□ -0.38
PRUNE2-213ENST00000489555 ZNF518AQ6AHZ1 1483 aa12.65□□□□□ -0.38
PRUNE2-213ENST00000489555 PTPRTO14522 1441 aa12.65□□□□□ -0.38
PRUNE2-213ENST00000489555 POTEDQ86YR6 584 aa12.65□□□□□ -0.38
PRUNE2-213ENST00000489555 CSRNP3Q8WYN3 585 aa12.65□□□□□ -0.38
PRUNE2-213ENST00000489555 C3P01024 1663 aa12.64□□□□□ -0.39
PRUNE2-213ENST00000489555 ILDR2Q71H61 639 aa12.63□□□□□ -0.39
PRUNE2-213ENST00000489555 KIF14Q15058 1648 aa12.62□□□□□ -0.39
PRUNE2-213ENST00000489555 CDK13Q14004 1512 aaKnown RBP12.62□□□□□ -0.39
PRUNE2-213ENST00000489555 DIP2CQ9Y2E4 1556 aa12.61□□□□□ -0.39
PRUNE2-213ENST00000489555 MLECQ14165 292 aa12.61□□□□□ -0.39
PRUNE2-213ENST00000489555 PLPPR3Q6T4P5 718 aa12.61□□□□□ -0.39
PRUNE2-213ENST00000489555 LTBP4Q8N2S1 1624 aa12.61□□□□□ -0.39
PRUNE2-213ENST00000489555 AGLP35573 1532 aa12.61□□□□□ -0.39
PRUNE2-213ENST00000489555 EFCAB2Q5VUJ9 269 aa12.6□□□□□ -0.39
PRUNE2-213ENST00000489555 MROH2AA6NES4 1674 aa12.59□□□□□ -0.39
PRUNE2-213ENST00000489555 ABCA6Q8N139 1617 aa12.59□□□□□ -0.39
PRUNE2-213ENST00000489555 MLH3Q9UHC1 1453 aa12.58□□□□□ -0.4
PRUNE2-213ENST00000489555 CDC42BPBQ9Y5S2 1711 aa12.57□□□□□ -0.4
PRUNE2-213ENST00000489555 FMN1Q68DA7 1419 aa12.57□□□□□ -0.4
PRUNE2-213ENST00000489555 CNTLNQ9NXG0 1405 aa12.56□□□□□ -0.4
PRUNE2-213ENST00000489555 ARHGAP5Q13017 1502 aa12.56□□□□□ -0.4
PRUNE2-213ENST00000489555 NCOA1Q15788 1441 aa12.55□□□□□ -0.4
PRUNE2-213ENST00000489555 TRAPPC8Q9Y2L5 1435 aa12.55□□□□□ -0.4
PRUNE2-213ENST00000489555 CEBPAP49715 358 aaPredicted RBP12.55□□□□□ -0.4
PRUNE2-213ENST00000489555 CDK11AQ9UQ88 783 aaPredicted RBP12.55□□□□□ -0.4
PRUNE2-213ENST00000489555 PREX2Q70Z35 1606 aa12.55□□□□□ -0.4
PRUNE2-213ENST00000489555 ITSN2Q9NZM3 1697 aa12.54□□□□□ -0.4
PRUNE2-213ENST00000489555 TROQ12816 1431 aaPredicted RBP12.54□□□□□ -0.4
PRUNE2-213ENST00000489555 NPATQ14207 1427 aa12.54□□□□□ -0.4
PRUNE2-213ENST00000489555 ZNF142P52746 1687 aaPredicted RBP12.53□□□□□ -0.4
PRUNE2-213ENST00000489555 LRRIQ1Q96JM4 1722 aa12.53□□□□□ -0.4
PRUNE2-213ENST00000489555 KIDINS220Q9ULH0 1771 aa12.53□□□□□ -0.4
PRUNE2-213ENST00000489555 CLIP1P30622 1438 aa12.53□□□□□ -0.4
PRUNE2-213ENST00000489555 ABCC1P33527 1531 aa12.52□□□□□ -0.4
PRUNE2-213ENST00000489555 SUPT6HQ7KZ85 1726 aaKnown RBP12.52□□□□□ -0.41
PRUNE2-213ENST00000489555 CAMSAP1Q5T5Y3 1602 aa12.5□□□□□ -0.41
PRUNE2-213ENST00000489555 CDC42BPAQ5VT25 1732 aa12.49□□□□□ -0.41
PRUNE2-213ENST00000489555 RANGAP1P46060 587 aaPredicted RBP12.49□□□□□ -0.41
PRUNE2-213ENST00000489555 AFAP1Q8N556 730 aa12.49□□□□□ -0.41
PRUNE2-213ENST00000489555 PLA2R1Q13018 1463 aa12.48□□□□□ -0.41
PRUNE2-213ENST00000489555 ESF1Q9H501 851 aaKnown RBP12.48□□□□□ -0.41
PRUNE2-213ENST00000489555 MYO3AQ8NEV4 1616 aa12.47□□□□□ -0.41
PRUNE2-213ENST00000489555 ARHGAP35Q9NRY4 1499 aa12.46□□□□□ -0.41
PRUNE2-213ENST00000489555 CCDC18Q5T9S5 1454 aa12.45□□□□□ -0.42
PRUNE2-213ENST00000489555 TCOF1Q13428 1488 aaKnown RBP12.44□□□□□ -0.42
PRUNE2-213ENST00000489555 PLXNC1O60486 1568 aa12.43□□□□□ -0.42
PRUNE2-213ENST00000489555 SAMD9LQ8IVG5 1584 aa12.43□□□□□ -0.42
PRUNE2-213ENST00000489555 CEP170BQ9Y4F5 1589 aaPredicted RBP12.43□□□□□ -0.42
PRUNE2-213ENST00000489555 CLTCQ00610 1675 aaKnown RBP12.43□□□□□ -0.42
PRUNE2-213ENST00000489555 MYT1LQ9UL68 1186 aa12.43□□□□□ -0.42
PRUNE2-213ENST00000489555 PKD2Q13563 968 aa12.42□□□□□ -0.42
PRUNE2-213ENST00000489555 POLR1AO95602 1720 aaPredicted RBP12.42□□□□□ -0.42
PRUNE2-213ENST00000489555 ZMYM3Q14202 1370 aa12.41□□□□□ -0.42
PRUNE2-213ENST00000489555 INO80Q9ULG1 1556 aaPredicted RBP12.4□□□□□ -0.42
PRUNE2-213ENST00000489555 ADGBQ8N7X0 1667 aa12.4□□□□□ -0.42
PRUNE2-213ENST00000489555 MED1Q15648 1581 aaPredicted RBP12.39□□□□□ -0.43
PRUNE2-213ENST00000489555 ATP7AQ04656 1500 aa12.38□□□□□ -0.43
PRUNE2-213ENST00000489555 UBAP1LF5GYI3 381 aa12.38□□□□□ -0.43
PRUNE2-213ENST00000489555 ATP1B4Q9UN42 357 aaPredicted RBP12.38□□□□□ -0.43
PRUNE2-213ENST00000489555 ZNF335Q9H4Z2 1342 aaPredicted RBP12.37□□□□□ -0.43
PRUNE2-213ENST00000489555 PTPRKQ15262 1439 aa12.37□□□□□ -0.43
PRUNE2-213ENST00000489555 CASKIN1Q8WXD9 1431 aa12.37□□□□□ -0.43
PRUNE2-213ENST00000489555 CPS1P31327 1500 aa12.37□□□□□ -0.43
PRUNE2-213ENST00000489555 PPP6R1Q9UPN7 881 aa12.37□□□□□ -0.43
PRUNE2-213ENST00000489555 PLEKHH2Q8IVE3 1493 aa12.37□□□□□ -0.43
PRUNE2-213ENST00000489555 SYCP2Q9BX26 1530 aa12.37□□□□□ -0.43
PRUNE2-213ENST00000489555 KIAA1107Q9UPP5 1409 aa12.37□□□□□ -0.43
PRUNE2-213ENST00000489555 DNMT1P26358 1616 aaKnown RBP12.36□□□□□ -0.43
PRUNE2-213ENST00000489555 FAM135AQ9P2D6 1515 aa12.36□□□□□ -0.43
PRUNE2-213ENST00000489555 NCKAP5LQ9HCH0 1330 aa12.35□□□□□ -0.43
PRUNE2-213ENST00000489555 A2ML1A8K2U0 1454 aa12.34□□□□□ -0.43
PRUNE2-213ENST00000489555 A2MP01023 1474 aa12.34□□□□□ -0.43
PRUNE2-213ENST00000489555 FYCO1Q9BQS8 1478 aa12.34□□□□□ -0.43
PRUNE2-213ENST00000489555 UBTFP17480 764 aaKnown RBP12.34□□□□□ -0.43
PRUNE2-213ENST00000489555 SPAG9O60271 1321 aaKnown RBP12.34□□□□□ -0.43
PRUNE2-213ENST00000489555 GPATCH8Q9UKJ3 1502 aaKnown RBP12.32□□□□□ -0.44
PRUNE2-213ENST00000489555 NEURL4Q96JN8 1562 aa12.32□□□□□ -0.44
PRUNE2-213ENST00000489555 TOM1O60784 492 aa12.3□□□□□ -0.44
PRUNE2-213ENST00000489555 DEPDC5O75140 1603 aa12.29□□□□□ -0.44
PRUNE2-213ENST00000489555 SHANK2Q9UPX8 1470 aa12.29□□□□□ -0.44
PRUNE2-213ENST00000489555 VWDEQ8N2E2 1590 aa12.27□□□□□ -0.44
PRUNE2-213ENST00000489555 HSPA1LP34931 641 aa12.27□□□□□ -0.45
PRUNE2-213ENST00000489555 MED14O60244 1454 aa12.27□□□□□ -0.45
PRUNE2-213ENST00000489555 SYNMO15061 1565 aa12.26□□□□□ -0.45
PRUNE2-213ENST00000489555 RTEL1-TNFRSF6BF6WH68 1400 aa12.26□□□□□ -0.45
PRUNE2-213ENST00000489555 PZPP20742 1482 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms