RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 ARHGAP35Q9NRY4 1499 aa19.61■□□□□ 0.73
SFXN3-207ENST00000489434 CHIC1Q5VXU3 224 aa19.61■□□□□ 0.73
SFXN3-207ENST00000489434 MYO5CQ9NQX4 1742 aa19.6■□□□□ 0.73
SFXN3-207ENST00000489434 YEATS2Q9ULM3 1422 aa19.59■□□□□ 0.73
SFXN3-207ENST00000489434 CLIP1P30622 1438 aa19.58■□□□□ 0.72
SFXN3-207ENST00000489434 LMTK3Q96Q04 1460 aa19.57■□□□□ 0.72
SFXN3-207ENST00000489434 KIF14Q15058 1648 aa19.57■□□□□ 0.72
SFXN3-207ENST00000489434 MLECQ14165 292 aa19.56■□□□□ 0.72
SFXN3-207ENST00000489434 PLPPR3Q6T4P5 718 aa19.56■□□□□ 0.72
SFXN3-207ENST00000489434 TROQ12816 1431 aaPredicted RBP19.55■□□□□ 0.72
SFXN3-207ENST00000489434 FBXO41Q8TF61 875 aa19.55■□□□□ 0.72
SFXN3-207ENST00000489434 ATP10AO60312 1499 aa19.54■□□□□ 0.72
SFXN3-207ENST00000489434 ARHGAP5Q13017 1502 aa19.53■□□□□ 0.72
SFXN3-207ENST00000489434 ZNF518AQ6AHZ1 1483 aa19.52■□□□□ 0.72
SFXN3-207ENST00000489434 FER1L4A9Z1Z3 1794 aa19.52■□□□□ 0.71
SFXN3-207ENST00000489434 C9orf84Q5VXU9 1444 aa19.51■□□□□ 0.71
SFXN3-207ENST00000489434 MYT1LQ9UL68 1186 aa19.51■□□□□ 0.71
SFXN3-207ENST00000489434 SIGLEC1Q9BZZ2 1709 aa19.5■□□□□ 0.71
SFXN3-207ENST00000489434 HSPA2P54652 639 aa19.48■□□□□ 0.71
SFXN3-207ENST00000489434 CCDC18Q5T9S5 1454 aa19.47■□□□□ 0.71
SFXN3-207ENST00000489434 AFAP1Q8N556 730 aa19.46■□□□□ 0.71
SFXN3-207ENST00000489434 CASKIN1Q8WXD9 1431 aa19.45■□□□□ 0.7
SFXN3-207ENST00000489434 ARHGEF12Q9NZN5 1544 aa19.45■□□□□ 0.7
SFXN3-207ENST00000489434 LRRIQ1Q96JM4 1722 aa19.45■□□□□ 0.7
SFXN3-207ENST00000489434 KDM5CP41229 1560 aa19.44■□□□□ 0.7
SFXN3-207ENST00000489434 CDC42BPBQ9Y5S2 1711 aa19.41■□□□□ 0.7
SFXN3-207ENST00000489434 PREX2Q70Z35 1606 aa19.4■□□□□ 0.7
SFXN3-207ENST00000489434 FYCO1Q9BQS8 1478 aa19.38■□□□□ 0.69
SFXN3-207ENST00000489434 ESF1Q9H501 851 aaKnown RBP19.38■□□□□ 0.69
SFXN3-207ENST00000489434 MLH3Q9UHC1 1453 aa19.38■□□□□ 0.69
SFXN3-207ENST00000489434 PREX1Q8TCU6 1659 aa19.37■□□□□ 0.69
SFXN3-207ENST00000489434 DIP2CQ9Y2E4 1556 aa19.37■□□□□ 0.69
SFXN3-207ENST00000489434 SETD1BQ9UPS6 1966 aaKnown RBP19.37■□□□□ 0.69
SFXN3-207ENST00000489434 REREQ9P2R6 1566 aa19.36■□□□□ 0.69
SFXN3-207ENST00000489434 CEBPAP49715 358 aaPredicted RBP19.36■□□□□ 0.69
SFXN3-207ENST00000489434 ABCC1P33527 1531 aa19.35■□□□□ 0.69
SFXN3-207ENST00000489434 TRAPPC8Q9Y2L5 1435 aa19.34■□□□□ 0.69
SFXN3-207ENST00000489434 ITSN2Q9NZM3 1697 aa19.33■□□□□ 0.69
SFXN3-207ENST00000489434 ABCA6Q8N139 1617 aa19.33■□□□□ 0.69
SFXN3-207ENST00000489434 DMRT2Q9Y5R5 561 aa19.33■□□□□ 0.68
SFXN3-207ENST00000489434 UHRF1BP1Q6BDS2 1440 aa19.33■□□□□ 0.68
SFXN3-207ENST00000489434 CDC42BPAQ5VT25 1732 aa19.32■□□□□ 0.68
SFXN3-207ENST00000489434 ZNF777Q9ULD5 760 aaPredicted RBP19.32■□□□□ 0.68
SFXN3-207ENST00000489434 AGLP35573 1532 aa19.31■□□□□ 0.68
SFXN3-207ENST00000489434 CERKQ8TCT0 537 aa19.31■□□□□ 0.68
SFXN3-207ENST00000489434 CNTLNQ9NXG0 1405 aa19.27■□□□□ 0.68
SFXN3-207ENST00000489434 KIDINS220Q9ULH0 1771 aa19.27■□□□□ 0.68
SFXN3-207ENST00000489434 SPAG9O60271 1321 aaKnown RBP19.26■□□□□ 0.67
SFXN3-207ENST00000489434 C3P01024 1663 aa19.25■□□□□ 0.67
SFXN3-207ENST00000489434 CFDP1Q9UEE9 299 aaPredicted RBP19.25■□□□□ 0.67
SFXN3-207ENST00000489434 GPATCH8Q9UKJ3 1502 aaKnown RBP19.25■□□□□ 0.67
SFXN3-207ENST00000489434 SAMD9LQ8IVG5 1584 aa19.24■□□□□ 0.67
SFXN3-207ENST00000489434 PLEKHH2Q8IVE3 1493 aa19.24■□□□□ 0.67
SFXN3-207ENST00000489434 CCNB3Q8WWL7 1395 aa19.24■□□□□ 0.67
SFXN3-207ENST00000489434 MTUS2Q5JR59 1369 aa19.23■□□□□ 0.67
SFXN3-207ENST00000489434 SYCP2Q9BX26 1530 aa19.23■□□□□ 0.67
SFXN3-207ENST00000489434 HNRNPMP52272 730 aaKnown RBP eCLIP19.22■□□□□ 0.67
SFXN3-207ENST00000489434 KIAA1107Q9UPP5 1409 aa19.22■□□□□ 0.67
SFXN3-207ENST00000489434 STRCQ7RTU9 1775 aa19.21■□□□□ 0.67
SFXN3-207ENST00000489434 ATP7AQ04656 1500 aa19.18■□□□□ 0.66
SFXN3-207ENST00000489434 SUPT6HQ7KZ85 1726 aaKnown RBP19.17■□□□□ 0.66
SFXN3-207ENST00000489434 PTPRTO14522 1441 aa19.17■□□□□ 0.66
SFXN3-207ENST00000489434 MROH2AA6NES4 1674 aa19.16■□□□□ 0.66
SFXN3-207ENST00000489434 NPATQ14207 1427 aa19.16■□□□□ 0.66
SFXN3-207ENST00000489434 ZMYM3Q14202 1370 aa19.14■□□□□ 0.65
SFXN3-207ENST00000489434 A2MP01023 1474 aa19.14■□□□□ 0.65
SFXN3-207ENST00000489434 INO80Q9ULG1 1556 aaPredicted RBP19.13■□□□□ 0.65
SFXN3-207ENST00000489434 EHBP1L1Q8N3D4 1523 aa19.11■□□□□ 0.65
SFXN3-207ENST00000489434 PLXNC1O60486 1568 aa19.1■□□□□ 0.65
SFXN3-207ENST00000489434 NCOA1Q15788 1441 aa19.1■□□□□ 0.65
SFXN3-207ENST00000489434 GGT6Q6P531 493 aa19.1■□□□□ 0.65
SFXN3-207ENST00000489434 PPP6R1Q9UPN7 881 aa19.1■□□□□ 0.65
SFXN3-207ENST00000489434 ADGBQ8N7X0 1667 aa19.09■□□□□ 0.65
SFXN3-207ENST00000489434 CLTCQ00610 1675 aaKnown RBP19.08■□□□□ 0.65
SFXN3-207ENST00000489434 TIAM1Q13009 1591 aa19.08■□□□□ 0.65
SFXN3-207ENST00000489434 CEP162Q5TB80 1403 aa19.08■□□□□ 0.64
SFXN3-207ENST00000489434 ZNF644Q9H582 1327 aaPredicted RBP19.07■□□□□ 0.64
SFXN3-207ENST00000489434 CAMSAP1Q5T5Y3 1602 aa19.07■□□□□ 0.64
SFXN3-207ENST00000489434 RTEL1-TNFRSF6BF6WH68 1400 aa19.05■□□□□ 0.64
SFXN3-207ENST00000489434 MBD5Q9P267 1494 aa19.03■□□□□ 0.64
SFXN3-207ENST00000489434 PTPRKQ15262 1439 aa19.02■□□□□ 0.64
SFXN3-207ENST00000489434 PKD2Q13563 968 aa19.02■□□□□ 0.64
SFXN3-207ENST00000489434 RSPH4AQ5TD94 716 aa19.02■□□□□ 0.64
SFXN3-207ENST00000489434 MYO3AQ8NEV4 1616 aa19.01■□□□□ 0.63
SFXN3-207ENST00000489434 DHX29Q7Z478 1369 aaKnown RBP19.01■□□□□ 0.63
SFXN3-207ENST00000489434 IQSEC2Q5JU85 1478 aa19.01■□□□□ 0.63
SFXN3-207ENST00000489434 ZNF142P52746 1687 aaPredicted RBP19.01■□□□□ 0.63
SFXN3-207ENST00000489434 NCKAP5LQ9HCH0 1330 aa19■□□□□ 0.63
SFXN3-207ENST00000489434 LTBP4Q8N2S1 1624 aa19■□□□□ 0.63
SFXN3-207ENST00000489434 CEP170BQ9Y4F5 1589 aaPredicted RBP19■□□□□ 0.63
SFXN3-207ENST00000489434 PLA2R1Q13018 1463 aa18.99■□□□□ 0.63
SFXN3-207ENST00000489434 NCOA2Q15596 1464 aa18.99■□□□□ 0.63
SFXN3-207ENST00000489434 CCDC141Q6ZP82 1450 aa18.98■□□□□ 0.63
SFXN3-207ENST00000489434 KIF3BO15066 747 aa18.98■□□□□ 0.63
SFXN3-207ENST00000489434 CAMSAP2Q08AD1 1489 aa18.97■□□□□ 0.63
SFXN3-207ENST00000489434 DISP3Q9P2K9 1392 aa18.95■□□□□ 0.62
SFXN3-207ENST00000489434 TSPY4P0CV99 314 aa18.95■□□□□ 0.62
SFXN3-207ENST00000489434 TSPY10P0CW01 314 aa18.95■□□□□ 0.62
SFXN3-207ENST00000489434 FAM135AQ9P2D6 1515 aa18.94■□□□□ 0.62
SFXN3-207ENST00000489434 A2ML1A8K2U0 1454 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms