RNA–Protein interactions for RNA: ENST00000489421.1

SCMH1-216, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-216ENST00000489421 TDRD9Q8NDG6 1382 aaKnown RBP12.1□□□□□ -0.47
SCMH1-216ENST00000489421 C7P10643 843 aa12.1□□□□□ -0.47
SCMH1-216ENST00000489421 CIZ1Q9ULV3 898 aaPredicted RBP12.1□□□□□ -0.47
SCMH1-216ENST00000489421 CLASP1Q7Z460 1538 aa12.1□□□□□ -0.47
SCMH1-216ENST00000489421 CHRM1P11229 460 aaPredicted RBP12.09□□□□□ -0.47
SCMH1-216ENST00000489421 ABCA10Q8WWZ4 1543 aa12.09□□□□□ -0.47
SCMH1-216ENST00000489421 POTEFA5A3E0 1075 aa12.07□□□□□ -0.48
SCMH1-216ENST00000489421 TMEM106CQ9BVX2 250 aa12.07□□□□□ -0.48
SCMH1-216ENST00000489421 TRIM35Q9UPQ4 493 aa12.07□□□□□ -0.48
SCMH1-216ENST00000489421 MAGI1Q96QZ7 1491 aaPredicted RBP12.06□□□□□ -0.48
SCMH1-216ENST00000489421 ADAMTS12P58397 1594 aa12.05□□□□□ -0.48
SCMH1-216ENST00000489421 GRIN2BQ13224 1484 aa12.04□□□□□ -0.48
SCMH1-216ENST00000489421 GAPVD1Q14C86 1478 aa12.04□□□□□ -0.48
SCMH1-216ENST00000489421 TRIM41Q8WV44 630 aa12.03□□□□□ -0.48
SCMH1-216ENST00000489421 WRNQ14191 1432 aaPredicted RBP eCLIP12.03□□□□□ -0.48
SCMH1-216ENST00000489421 POTEJP0CG39 1038 aa12.02□□□□□ -0.49
SCMH1-216ENST00000489421 ZNF467Q7Z7K2 595 aaPredicted RBP12.02□□□□□ -0.49
SCMH1-216ENST00000489421 ARAP1Q96P48 1450 aa12.02□□□□□ -0.49
SCMH1-216ENST00000489421 OTUD5Q96G74 571 aa12.01□□□□□ -0.49
SCMH1-216ENST00000489421 COLQQ9Y215 455 aaPredicted RBP12.01□□□□□ -0.49
SCMH1-216ENST00000489421 SYNJ2O15056 1496 aa12.01□□□□□ -0.49
SCMH1-216ENST00000489421 CEP170Q5SW79 1584 aa12□□□□□ -0.49
SCMH1-216ENST00000489421 IER5LQ5T953 404 aa11.97□□□□□ -0.49
SCMH1-216ENST00000489421 ERCC6L2Q5T890 1561 aa11.96□□□□□ -0.49
SCMH1-216ENST00000489421 SHROOM2Q13796 1616 aa11.96□□□□□ -0.5
SCMH1-216ENST00000489421 ERICH3Q5RHP9 1530 aa11.95□□□□□ -0.5
SCMH1-216ENST00000489421 GRIN2AQ12879 1464 aa11.94□□□□□ -0.5
SCMH1-216ENST00000489421 SEC24BO95487 1268 aa11.93□□□□□ -0.5
SCMH1-216ENST00000489421 PSEN1P49768 467 aa11.93□□□□□ -0.5
SCMH1-216ENST00000489421 IRX5P78411 483 aaPredicted RBP11.91□□□□□ -0.5
SCMH1-216ENST00000489421 RUSC2Q8N2Y8 1516 aa11.91□□□□□ -0.5
SCMH1-216ENST00000489421 PDAP1Q13442 181 aaKnown RBP11.9□□□□□ -0.5
SCMH1-216ENST00000489421 NUP160Q12769 1436 aa11.89□□□□□ -0.51
SCMH1-216ENST00000489421 RNF25Q96BH1 459 aaPredicted RBP11.88□□□□□ -0.51
SCMH1-216ENST00000489421 CUL7Q14999 1698 aa11.87□□□□□ -0.51
SCMH1-216ENST00000489421 CHMP7Q8WUX9 453 aaPredicted RBP11.87□□□□□ -0.51
SCMH1-216ENST00000489421 FHAD1B1AJZ9 1412 aa11.86□□□□□ -0.51
SCMH1-216ENST00000489421 PLCG2P16885 1265 aa11.85□□□□□ -0.51
SCMH1-216ENST00000489421 KIF13AQ9H1H9 1805 aa11.83□□□□□ -0.51
SCMH1-216ENST00000489421 CYB5RLQ6IPT4 315 aa11.83□□□□□ -0.52
SCMH1-216ENST00000489421 MAMSTRQ6ZN01 415 aa11.83□□□□□ -0.52
SCMH1-216ENST00000489421 OCEL1Q9H607 264 aa11.82□□□□□ -0.52
SCMH1-216ENST00000489421 SCUBE2Q9NQ36 999 aa11.81□□□□□ -0.52
SCMH1-216ENST00000489421 RIOK3O14730 519 aaKnown RBP11.8□□□□□ -0.52
SCMH1-216ENST00000489421 GOLGA2Q08379 1002 aa11.8□□□□□ -0.52
SCMH1-216ENST00000489421 CABP2Q9NPB3 220 aa11.8□□□□□ -0.52
SCMH1-216ENST00000489421 MKRN3Q13064 507 aaKnown RBP11.79□□□□□ -0.52
SCMH1-216ENST00000489421 PDCD7Q8N8D1 485 aaKnown RBP11.79□□□□□ -0.52
SCMH1-216ENST00000489421 PKD2Q13563 968 aa11.78□□□□□ -0.52
SCMH1-216ENST00000489421 CTTNBP2Q8WZ74 1663 aa11.76□□□□□ -0.53
SCMH1-216ENST00000489421 ILDR1Q86SU0 546 aaPredicted RBP11.75□□□□□ -0.53
SCMH1-216ENST00000489421 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.74□□□□□ -0.53
SCMH1-216ENST00000489421 IGF1RP08069 1367 aa11.74□□□□□ -0.53
SCMH1-216ENST00000489421 KIF27Q86VH2 1401 aa11.74□□□□□ -0.53
SCMH1-216ENST00000489421 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.73□□□□□ -0.53
SCMH1-216ENST00000489421 ECM2O94769 699 aaPredicted RBP11.73□□□□□ -0.53
SCMH1-216ENST00000489421 ZFP91Q96JP5 570 aaPredicted RBP11.73□□□□□ -0.53
SCMH1-216ENST00000489421 ADCY10Q96PN6 1610 aa11.73□□□□□ -0.53
SCMH1-216ENST00000489421 VGFO15240 615 aaPredicted RBP11.72□□□□□ -0.53
SCMH1-216ENST00000489421 PRG4Q92954 1404 aaPredicted RBP11.7□□□□□ -0.54
SCMH1-216ENST00000489421 EFCAB3Q8N7B9 438 aa11.7□□□□□ -0.54
SCMH1-216ENST00000489421 EEA1Q15075 1411 aa11.69□□□□□ -0.54
SCMH1-216ENST00000489421 IQGAP2Q13576 1575 aa11.69□□□□□ -0.54
SCMH1-216ENST00000489421 RGL2O15211 777 aa11.68□□□□□ -0.54
SCMH1-216ENST00000489421 DPY19L2Q6NUT2 758 aa11.68□□□□□ -0.54
SCMH1-216ENST00000489421 FAM9AQ8IZU1 332 aaPredicted RBP11.68□□□□□ -0.54
SCMH1-216ENST00000489421 KIAA0586Q9BVV6 1533 aa11.68□□□□□ -0.54
SCMH1-216ENST00000489421 TSPOAP1O95153 1857 aa11.64□□□□□ -0.55
SCMH1-216ENST00000489421 LOC105371045A0A1W2PR82 267 aa11.64□□□□□ -0.55
SCMH1-216ENST00000489421 SLAIN1Q8ND83 568 aa11.64□□□□□ -0.55
SCMH1-216ENST00000489421 CARMIL1Q5VZK9 1371 aa11.64□□□□□ -0.55
SCMH1-216ENST00000489421 DIP2BQ9P265 1576 aa11.63□□□□□ -0.55
SCMH1-216ENST00000489421 LCE2DQ5TA82 110 aaPredicted RBP11.63□□□□□ -0.55
SCMH1-216ENST00000489421 JPH4Q96JJ6 628 aa11.63□□□□□ -0.55
SCMH1-216ENST00000489421 KIAA0556O60303 1618 aa11.62□□□□□ -0.55
SCMH1-216ENST00000489421 L3MBTL3Q96JM7 780 aaPredicted RBP11.62□□□□□ -0.55
SCMH1-216ENST00000489421 DISP1Q96F81 1524 aa11.61□□□□□ -0.55
SCMH1-216ENST00000489421 BCL11BQ9C0K0 894 aaPredicted RBP11.61□□□□□ -0.55
SCMH1-216ENST00000489421 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.6□□□□□ -0.55
SCMH1-216ENST00000489421 MAPKBP1O60336 1514 aa11.6□□□□□ -0.55
SCMH1-216ENST00000489421 PPRC1Q5VV67 1664 aaKnown RBP11.59□□□□□ -0.55
SCMH1-216ENST00000489421 RAPGEF2Q9Y4G8 1499 aa11.59□□□□□ -0.55
SCMH1-216ENST00000489421 UGGT2Q9NYU1 1516 aa11.59□□□□□ -0.55
SCMH1-216ENST00000489421 TAOK2Q9UL54 1235 aa11.58□□□□□ -0.56
SCMH1-216ENST00000489421 STK24Q9Y6E0 443 aa11.58□□□□□ -0.56
SCMH1-216ENST00000489421 SOX12O15370 315 aa11.57□□□□□ -0.56
SCMH1-216ENST00000489421 FAM163AQ96GL9 167 aaPredicted RBP11.57□□□□□ -0.56
SCMH1-216ENST00000489421 MS4A4AQ96JQ5 239 aa11.57□□□□□ -0.56
SCMH1-216ENST00000489421 PHF8Q9UPP1 1060 aa11.57□□□□□ -0.56
SCMH1-216ENST00000489421 ZCCHC11Q5TAX3 1644 aaKnown RBP11.57□□□□□ -0.56
SCMH1-216ENST00000489421 STK25O00506 426 aa11.56□□□□□ -0.56
SCMH1-216ENST00000489421 C3orf67Q6ZVT6 689 aa11.56□□□□□ -0.56
SCMH1-216ENST00000489421 BOLA1Q9Y3E2 137 aa11.56□□□□□ -0.56
SCMH1-216ENST00000489421 ABCC2Q92887 1545 aa11.55□□□□□ -0.56
SCMH1-216ENST00000489421 PRXQ9BXM0 1461 aa11.55□□□□□ -0.56
SCMH1-216ENST00000489421 ABCC10Q5T3U5 1492 aa11.52□□□□□ -0.56
SCMH1-216ENST00000489421 POTEMA6NI47 508 aa11.52□□□□□ -0.57
SCMH1-216ENST00000489421 TMEM121BQ9BXQ6 578 aaPredicted RBP11.52□□□□□ -0.57
SCMH1-216ENST00000489421 POTEGQ6S5H5 508 aa11.51□□□□□ -0.57
SCMH1-216ENST00000489421 FBXO22Q8NEZ5 403 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms