RNA–Protein interactions for RNA: ENST00000489169.1

CACUL1-204, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 2

Gene CACUL1, Length 517 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-204ENST00000489169 TMEM121BQ9BXQ6 578 aaPredicted RBP12.8□□□□□ -0.36
CACUL1-204ENST00000489169 ERCC6Q03468 1493 aa12.79□□□□□ -0.36
CACUL1-204ENST00000489169 BBXQ8WY36 941 aaPredicted RBP12.79□□□□□ -0.36
CACUL1-204ENST00000489169 EFCAB3Q8N7B9 438 aa12.77□□□□□ -0.37
CACUL1-204ENST00000489169 BOLA1Q9Y3E2 137 aa12.77□□□□□ -0.37
CACUL1-204ENST00000489169 PEG3Q9GZU2 1588 aa12.77□□□□□ -0.37
CACUL1-204ENST00000489169 VGFO15240 615 aaPredicted RBP12.75□□□□□ -0.37
CACUL1-204ENST00000489169 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.75□□□□□ -0.37
CACUL1-204ENST00000489169 TAOK2Q9UL54 1235 aa12.75□□□□□ -0.37
CACUL1-204ENST00000489169 CDAN1Q8IWY9 1227 aa12.74□□□□□ -0.37
CACUL1-204ENST00000489169 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.73□□□□□ -0.37
CACUL1-204ENST00000489169 ZFP91Q96JP5 570 aaPredicted RBP12.73□□□□□ -0.37
CACUL1-204ENST00000489169 SMARCA2P51531 1590 aa12.72□□□□□ -0.37
CACUL1-204ENST00000489169 EIF4G1Q04637 1599 aaKnown RBP12.72□□□□□ -0.37
CACUL1-204ENST00000489169 PRKCSHP14314 528 aaPredicted RBP12.71□□□□□ -0.37
CACUL1-204ENST00000489169 G3V3G9 751 aa12.7□□□□□ -0.38
CACUL1-204ENST00000489169 ECM2O94769 699 aaPredicted RBP12.7□□□□□ -0.38
CACUL1-204ENST00000489169 KDM2AQ9Y2K7 1162 aa12.7□□□□□ -0.38
CACUL1-204ENST00000489169 WIZO95785 1651 aa12.7□□□□□ -0.38
CACUL1-204ENST00000489169 SOX12O15370 315 aa12.69□□□□□ -0.38
CACUL1-204ENST00000489169 TOP2AP11388 1531 aaKnown RBP12.68□□□□□ -0.38
CACUL1-204ENST00000489169 ATAD2BQ9ULI0 1458 aa12.65□□□□□ -0.38
CACUL1-204ENST00000489169 MARVELD3Q96A59 401 aa12.65□□□□□ -0.38
CACUL1-204ENST00000489169 MS4A4AQ96JQ5 239 aa12.65□□□□□ -0.38
CACUL1-204ENST00000489169 PAXIP1Q6ZW49 1069 aaPredicted RBP12.63□□□□□ -0.39
CACUL1-204ENST00000489169 HOXB3P14651 431 aaPredicted RBP12.62□□□□□ -0.39
CACUL1-204ENST00000489169 MICALL2Q8IY33 904 aa12.61□□□□□ -0.39
CACUL1-204ENST00000489169 PHF8Q9UPP1 1060 aa12.61□□□□□ -0.39
CACUL1-204ENST00000489169 NCAPD3P42695 1498 aa12.6□□□□□ -0.39
CACUL1-204ENST00000489169 HMGXB3Q12766 1538 aa12.6□□□□□ -0.39
CACUL1-204ENST00000489169 BAZ1BQ9UIG0 1483 aaKnown RBP12.59□□□□□ -0.39
CACUL1-204ENST00000489169 RGL2O15211 777 aa12.58□□□□□ -0.4
CACUL1-204ENST00000489169 BCL11BQ9C0K0 894 aaPredicted RBP12.58□□□□□ -0.4
CACUL1-204ENST00000489169 EMP3P54852 163 aa12.57□□□□□ -0.4
CACUL1-204ENST00000489169 CFAP44Q96MT7 982 aa12.57□□□□□ -0.4
CACUL1-204ENST00000489169 FBXO22Q8NEZ5 403 aa12.56□□□□□ -0.4
CACUL1-204ENST00000489169 TMEM92Q6UXU6 159 aa12.55□□□□□ -0.4
CACUL1-204ENST00000489169 SPRYD3Q8NCJ5 442 aa12.55□□□□□ -0.4
CACUL1-204ENST00000489169 NLRP6P59044 892 aa12.53□□□□□ -0.4
CACUL1-204ENST00000489169 STK24Q9Y6E0 443 aa12.52□□□□□ -0.41
CACUL1-204ENST00000489169 POTEB3A0JP26 581 aa12.51□□□□□ -0.41
CACUL1-204ENST00000489169 DOK7Q18PE1 504 aa12.51□□□□□ -0.41
CACUL1-204ENST00000489169 POTEBQ6S5H4 581 aa12.51□□□□□ -0.41
CACUL1-204ENST00000489169 STK25O00506 426 aa12.5□□□□□ -0.41
CACUL1-204ENST00000489169 HOXB1P14653 301 aaPredicted RBP12.5□□□□□ -0.41
CACUL1-204ENST00000489169 TPRNQ4KMQ1 711 aa12.5□□□□□ -0.41
CACUL1-204ENST00000489169 HS3ST6Q96QI5 342 aa12.5□□□□□ -0.41
CACUL1-204ENST00000489169 MFRPQ9BY79 579 aa12.5□□□□□ -0.41
CACUL1-204ENST00000489169 CCDC88BA6NC98 1476 aa12.49□□□□□ -0.41
CACUL1-204ENST00000489169 TSHZ2Q9NRE2 1034 aa12.48□□□□□ -0.41
CACUL1-204ENST00000489169 FAM205CA6NFA0 338 aa12.47□□□□□ -0.41
CACUL1-204ENST00000489169 ZNF710Q8N1W2 664 aa12.47□□□□□ -0.41
CACUL1-204ENST00000489169 SPNS2Q8IVW8 549 aa12.45□□□□□ -0.42
CACUL1-204ENST00000489169 KRTAP3-3Q9BYR6 98 aa12.44□□□□□ -0.42
CACUL1-204ENST00000489169 KRTAP3-2Q9BYR7 98 aa12.44□□□□□ -0.42
CACUL1-204ENST00000489169 RIMBP2O15034 1052 aa12.43□□□□□ -0.42
CACUL1-204ENST00000489169 ZSWIM6Q9HCJ5 1215 aa12.43□□□□□ -0.42
CACUL1-204ENST00000489169 LMTK3Q96Q04 1460 aa12.42□□□□□ -0.42
CACUL1-204ENST00000489169 SOCS7O14512 581 aa12.4□□□□□ -0.42
CACUL1-204ENST00000489169 CHGAP10645 457 aaKnown RBP12.4□□□□□ -0.42
CACUL1-204ENST00000489169 MMRN1Q13201 1228 aa12.4□□□□□ -0.42
CACUL1-204ENST00000489169 RIMBP3CA6NJZ7 1639 aa12.4□□□□□ -0.42
CACUL1-204ENST00000489169 RIMBP3BA6NNM3 1639 aa12.4□□□□□ -0.42
CACUL1-204ENST00000489169 RIMBP3Q9UFD9 1639 aa12.4□□□□□ -0.42
CACUL1-204ENST00000489169 GPR153Q6NV75 609 aa12.37□□□□□ -0.43
CACUL1-204ENST00000489169 KIF3CO14782 793 aa12.36□□□□□ -0.43
CACUL1-204ENST00000489169 ERBB3P21860 1342 aa12.35□□□□□ -0.43
CACUL1-204ENST00000489169 HS6ST3Q8IZP7 471 aa12.33□□□□□ -0.44
CACUL1-204ENST00000489169 THOC2Q8NI27 1593 aaKnown RBP12.31□□□□□ -0.44
CACUL1-204ENST00000489169 C2orf72A6NCS6 295 aa12.29□□□□□ -0.44
CACUL1-204ENST00000489169 VARS2Q5ST30 1063 aaKnown RBP12.29□□□□□ -0.44
CACUL1-204ENST00000489169 CFTRP13569 1480 aa12.28□□□□□ -0.44
CACUL1-204ENST00000489169 PPP1R37O75864 691 aa12.26□□□□□ -0.45
CACUL1-204ENST00000489169 ARSIQ5FYB1 569 aa12.26□□□□□ -0.45
CACUL1-204ENST00000489169 CADPSQ9ULU8 1353 aa12.25□□□□□ -0.45
CACUL1-204ENST00000489169 ZNF687Q8N1G0 1237 aa12.24□□□□□ -0.45
CACUL1-204ENST00000489169 PRDM2Q13029 1718 aa12.23□□□□□ -0.45
CACUL1-204ENST00000489169 SLC34A2O95436 690 aa12.22□□□□□ -0.45
CACUL1-204ENST00000489169 NBR1Q14596 966 aa12.22□□□□□ -0.45
CACUL1-204ENST00000489169 ARHGEF11O15085 1522 aa12.21□□□□□ -0.45
CACUL1-204ENST00000489169 FBXO41Q8TF61 875 aa12.21□□□□□ -0.45
CACUL1-204ENST00000489169 TMC2Q8TDI7 906 aa12.2□□□□□ -0.46
CACUL1-204ENST00000489169 KHSRPQ92945 711 aaKnown RBP eCLIP12.2□□□□□ -0.466e-10■■■□□ 17.2
CACUL1-204ENST00000489169 CYB5RLQ6IPT4 315 aa12.19□□□□□ -0.46
CACUL1-204ENST00000489169 WRNQ14191 1432 aaPredicted RBP eCLIP12.19□□□□□ -0.46
CACUL1-204ENST00000489169 LAMC3Q9Y6N6 1575 aa12.18□□□□□ -0.46
CACUL1-204ENST00000489169 ZNF316A6NFI3 1004 aaPredicted RBP12.18□□□□□ -0.46
CACUL1-204ENST00000489169 NKX1-1Q15270 411 aaPredicted RBP12.15□□□□□ -0.46
CACUL1-204ENST00000489169 ILDR2Q71H61 639 aa12.15□□□□□ -0.46
CACUL1-204ENST00000489169 GTPBP6O43824 516 aaPredicted RBP12.13□□□□□ -0.47
CACUL1-204ENST00000489169 PCDHGA4Q9Y5G9 962 aa12.13□□□□□ -0.47
CACUL1-204ENST00000489169 ABCC8Q09428 1581 aa12.13□□□□□ -0.47
CACUL1-204ENST00000489169 NUDT7P0C024 238 aa12.12□□□□□ -0.47
CACUL1-204ENST00000489169 TOP2BQ02880 1626 aa12.1□□□□□ -0.47
CACUL1-204ENST00000489169 PDS5BQ9NTI5 1447 aa12.1□□□□□ -0.47
CACUL1-204ENST00000489169 NESP48681 1621 aa12.09□□□□□ -0.47
CACUL1-204ENST00000489169 FOXK1P85037 733 aa12.09□□□□□ -0.47
CACUL1-204ENST00000489169 EEA1Q15075 1411 aa12.09□□□□□ -0.47
CACUL1-204ENST00000489169 FANCD2Q9BXW9 1451 aa12.08□□□□□ -0.47
CACUL1-204ENST00000489169 BIVM-ERCC5R4GMW8 1640 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms