RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 KIF21AQ7Z4S6 1674 aa14.91□□□□□ -0.02
TRAPPC12-221ENST00000489032 PDS5BQ9NTI5 1447 aa14.89□□□□□ -0.03
TRAPPC12-221ENST00000489032 IER5LQ5T953 404 aa14.88□□□□□ -0.03
TRAPPC12-221ENST00000489032 BAZ1BQ9UIG0 1483 aaKnown RBP14.88□□□□□ -0.03
TRAPPC12-221ENST00000489032 SMARCA4P51532 1647 aa14.86□□□□□ -0.03
TRAPPC12-221ENST00000489032 CADPS2Q86UW7 1296 aa14.86□□□□□ -0.03
TRAPPC12-221ENST00000489032 G3V3G9 751 aa14.85□□□□□ -0.03
TRAPPC12-221ENST00000489032 BAZ1AQ9NRL2 1556 aaPredicted RBP14.85□□□□□ -0.03
TRAPPC12-221ENST00000489032 SP7Q8TDD2 431 aaPredicted RBP14.84□□□□□ -0.03
TRAPPC12-221ENST00000489032 OCEL1Q9H607 264 aa14.84□□□□□ -0.03
TRAPPC12-221ENST00000489032 PLCG2P16885 1265 aa14.83□□□□□ -0.04
TRAPPC12-221ENST00000489032 SEC24BO95487 1268 aa14.82□□□□□ -0.04
TRAPPC12-221ENST00000489032 ILDR1Q86SU0 546 aaPredicted RBP14.82□□□□□ -0.04
TRAPPC12-221ENST00000489032 NBR1Q14596 966 aa14.8□□□□□ -0.04
TRAPPC12-221ENST00000489032 PDE4AP27815 886 aa14.79□□□□□ -0.04
TRAPPC12-221ENST00000489032 IRX5P78411 483 aaPredicted RBP14.79□□□□□ -0.04
TRAPPC12-221ENST00000489032 P3H3Q8IVL6 736 aa14.79□□□□□ -0.04
TRAPPC12-221ENST00000489032 MRC2Q9UBG0 1479 aa14.78□□□□□ -0.04
TRAPPC12-221ENST00000489032 SLC39A7Q92504 469 aa14.77□□□□□ -0.05
TRAPPC12-221ENST00000489032 DPY19L2Q6NUT2 758 aa14.76□□□□□ -0.05
TRAPPC12-221ENST00000489032 WDR62O43379 1518 aa14.76□□□□□ -0.05
TRAPPC12-221ENST00000489032 PDCD7Q8N8D1 485 aaKnown RBP14.74□□□□□ -0.05
TRAPPC12-221ENST00000489032 C7P10643 843 aa14.73□□□□□ -0.05
TRAPPC12-221ENST00000489032 L3MBTL3Q96JM7 780 aaPredicted RBP14.73□□□□□ -0.05
TRAPPC12-221ENST00000489032 LARP6Q9BRS8 491 aaKnown RBP14.73□□□□□ -0.05
TRAPPC12-221ENST00000489032 PEG3Q9GZU2 1588 aa14.72□□□□□ -0.05
TRAPPC12-221ENST00000489032 PELP1Q8IZL8 1130 aaKnown RBP14.71□□□□□ -0.05
TRAPPC12-221ENST00000489032 BOLA1Q9Y3E2 137 aa14.71□□□□□ -0.05
TRAPPC12-221ENST00000489032 MICALL2Q8IY33 904 aa14.69□□□□□ -0.06
TRAPPC12-221ENST00000489032 CADPSQ9ULU8 1353 aa14.69□□□□□ -0.06
TRAPPC12-221ENST00000489032 RIMBP3CA6NJZ7 1639 aa14.67□□□□□ -0.06
TRAPPC12-221ENST00000489032 RIMBP3BA6NNM3 1639 aa14.67□□□□□ -0.06
TRAPPC12-221ENST00000489032 RIMBP3Q9UFD9 1639 aa14.67□□□□□ -0.06
TRAPPC12-221ENST00000489032 DDX27Q96GQ7 796 aaKnown RBP14.67□□□□□ -0.06
TRAPPC12-221ENST00000489032 NCKAP5LQ9HCH0 1330 aa14.66□□□□□ -0.06
TRAPPC12-221ENST00000489032 E2F4Q16254 413 aa14.66□□□□□ -0.06
TRAPPC12-221ENST00000489032 METRNQ9UJH8 293 aa14.66□□□□□ -0.06
TRAPPC12-221ENST00000489032 TMC2Q8TDI7 906 aa14.65□□□□□ -0.06
TRAPPC12-221ENST00000489032 CRISPLD2Q9H0B8 497 aa14.65□□□□□ -0.06
TRAPPC12-221ENST00000489032 COLQQ9Y215 455 aaPredicted RBP14.62□□□□□ -0.07
TRAPPC12-221ENST00000489032 POTEIP0CG38 1075 aa14.61□□□□□ -0.07
TRAPPC12-221ENST00000489032 KCNV2Q8TDN2 545 aa14.61□□□□□ -0.07
TRAPPC12-221ENST00000489032 GPHNQ9NQX3 736 aaPredicted RBP14.6□□□□□ -0.07
TRAPPC12-221ENST00000489032 CEP164Q9UPV0 1460 aa14.6□□□□□ -0.07
TRAPPC12-221ENST00000489032 MFSD10Q14728 455 aa14.59□□□□□ -0.07
TRAPPC12-221ENST00000489032 TMEM121BQ9BXQ6 578 aaPredicted RBP14.58□□□□□ -0.08
TRAPPC12-221ENST00000489032 ARHGEF11O15085 1522 aa14.56□□□□□ -0.08
TRAPPC12-221ENST00000489032 PPP1R15BQ5SWA1 713 aa14.56□□□□□ -0.08
TRAPPC12-221ENST00000489032 ARHGEF1Q92888 912 aaKnown RBP14.55□□□□□ -0.08
TRAPPC12-221ENST00000489032 C3orf67Q6ZVT6 689 aa14.54□□□□□ -0.08
TRAPPC12-221ENST00000489032 MROH2BQ7Z745 1585 aa14.52□□□□□ -0.08
TRAPPC12-221ENST00000489032 FANCD2Q9BXW9 1451 aa14.52□□□□□ -0.08
TRAPPC12-221ENST00000489032 CYB5RLQ6IPT4 315 aa14.51□□□□□ -0.09
TRAPPC12-221ENST00000489032 POTEFA5A3E0 1075 aa14.5□□□□□ -0.09
TRAPPC12-221ENST00000489032 C2orf72A6NCS6 295 aa14.48□□□□□ -0.09
TRAPPC12-221ENST00000489032 FOXK1P85037 733 aa14.48□□□□□ -0.09
TRAPPC12-221ENST00000489032 DSG2Q14126 1118 aa14.48□□□□□ -0.09
TRAPPC12-221ENST00000489032 TULP1O00294 542 aaPredicted RBP14.47□□□□□ -0.09
TRAPPC12-221ENST00000489032 CAMK2BQ13554 666 aa14.44□□□□□ -0.1
TRAPPC12-221ENST00000489032 PLPP6Q8IY26 295 aa14.44□□□□□ -0.1
TRAPPC12-221ENST00000489032 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.43□□□□□ -0.1
TRAPPC12-221ENST00000489032 URB2Q14146 1524 aaKnown RBP14.42□□□□□ -0.1
TRAPPC12-221ENST00000489032 KIF3CO14782 793 aa14.41□□□□□ -0.1
TRAPPC12-221ENST00000489032 RSF1Q96T23 1441 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC12-221ENST00000489032 TPRNQ4KMQ1 711 aa14.38□□□□□ -0.11
TRAPPC12-221ENST00000489032 ARIH1Q9Y4X5 557 aaPredicted RBP14.38□□□□□ -0.11
TRAPPC12-221ENST00000489032 CFTRP13569 1480 aa14.38□□□□□ -0.11
TRAPPC12-221ENST00000489032 ARAP1Q96P48 1450 aa14.37□□□□□ -0.11
TRAPPC12-221ENST00000489032 TMEM92Q6UXU6 159 aa14.36□□□□□ -0.11
TRAPPC12-221ENST00000489032 WIZO95785 1651 aa14.35□□□□□ -0.11
TRAPPC12-221ENST00000489032 SMYD5Q6GMV2 418 aa14.34□□□□□ -0.11
TRAPPC12-221ENST00000489032 ZNF608Q9ULD9 1512 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC12-221ENST00000489032 IFT140Q96RY7 1462 aa14.33□□□□□ -0.12
TRAPPC12-221ENST00000489032 DPYSL4O14531 572 aa14.33□□□□□ -0.12
TRAPPC12-221ENST00000489032 SEMA3EO15041 775 aa14.33□□□□□ -0.12
TRAPPC12-221ENST00000489032 MAP3K9P80192 1104 aa14.33□□□□□ -0.12
TRAPPC12-221ENST00000489032 EMILIN3Q9NT22 766 aa14.32□□□□□ -0.12
TRAPPC12-221ENST00000489032 SPDYE16A6NNV3 312 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC12-221ENST00000489032 PRKCSHP14314 528 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC12-221ENST00000489032 UPF1Q92900 1129 aaKnown RBP eCLIP14.29□□□□□ -0.12
TRAPPC12-221ENST00000489032 TBC1D12O60347 775 aa14.27□□□□□ -0.13
TRAPPC12-221ENST00000489032 SCUBE2Q9NQ36 999 aa14.27□□□□□ -0.13
TRAPPC12-221ENST00000489032 CHD1O14646 1710 aa14.27□□□□□ -0.13
TRAPPC12-221ENST00000489032 TESPA1A2RU30 521 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC12-221ENST00000489032 MAMSTRQ6ZN01 415 aa14.26□□□□□ -0.13
TRAPPC12-221ENST00000489032 LMOD2Q6P5Q4 547 aa14.25□□□□□ -0.13
TRAPPC12-221ENST00000489032 EIF4G3O43432 1585 aaKnown RBP14.25□□□□□ -0.13
TRAPPC12-221ENST00000489032 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.24□□□□□ -0.13
TRAPPC12-221ENST00000489032 ZNF316A6NFI3 1004 aaPredicted RBP14.23□□□□□ -0.13
TRAPPC12-221ENST00000489032 TOP2AP11388 1531 aaKnown RBP14.23□□□□□ -0.13
TRAPPC12-221ENST00000489032 PDIA6Q15084 440 aa14.22□□□□□ -0.13
TRAPPC12-221ENST00000489032 PRDM2Q13029 1718 aa14.21□□□□□ -0.14
TRAPPC12-221ENST00000489032 OXER1Q8TDS5 423 aa14.2□□□□□ -0.14
TRAPPC12-221ENST00000489032 SUPT5HO00267 1087 aaKnown RBP14.19□□□□□ -0.14
TRAPPC12-221ENST00000489032 SLAIN1Q8ND83 568 aa14.19□□□□□ -0.14
TRAPPC12-221ENST00000489032 TOPBP1Q92547 1522 aa14.17□□□□□ -0.14
TRAPPC12-221ENST00000489032 POTEB2H3BUK9 544 aa14.17□□□□□ -0.14
TRAPPC12-221ENST00000489032 SLC34A2O95436 690 aa14.16□□□□□ -0.14
TRAPPC12-221ENST00000489032 PTCD2Q8WV60 388 aaKnown RBP14.16□□□□□ -0.14
TRAPPC12-221ENST00000489032 AQRO60306 1485 aaKnown RBP eCLIP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms