RNA–Protein interactions for RNA: ENST00000488828.1

NUP98-212, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-212ENST00000488828 FYCO1Q9BQS8 1478 aa17.45■□□□□ 0.38
NUP98-212ENST00000488828 CCDC18Q5T9S5 1454 aa17.44■□□□□ 0.38
NUP98-212ENST00000488828 CFAP43Q8NDM7 1665 aa17.43■□□□□ 0.38
NUP98-212ENST00000488828 KDM6BO15054 1643 aa17.42■□□□□ 0.38
NUP98-212ENST00000488828 MAGI3Q5TCQ9 1506 aa17.41■□□□□ 0.38
NUP98-212ENST00000488828 TROQ12816 1431 aaPredicted RBP17.4■□□□□ 0.38
NUP98-212ENST00000488828 ABCA9Q8IUA7 1624 aa17.39■□□□□ 0.38
NUP98-212ENST00000488828 PPRC1Q5VV67 1664 aaKnown RBP17.39■□□□□ 0.37
NUP98-212ENST00000488828 APLP2Q06481 763 aa17.38■□□□□ 0.37
NUP98-212ENST00000488828 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.37■□□□□ 0.37
NUP98-212ENST00000488828 LRRIQ1Q96JM4 1722 aa17.36■□□□□ 0.37
NUP98-212ENST00000488828 SAMD1Q6SPF0 538 aaPredicted RBP17.36■□□□□ 0.37
NUP98-212ENST00000488828 MTUS2Q5JR59 1369 aa17.36■□□□□ 0.37
NUP98-212ENST00000488828 VPS8Q8N3P4 1428 aa17.36■□□□□ 0.37
NUP98-212ENST00000488828 EFCAB2Q5VUJ9 269 aa17.35■□□□□ 0.37
NUP98-212ENST00000488828 PHLDB1Q86UU1 1377 aa17.34■□□□□ 0.37
NUP98-212ENST00000488828 COL17A1Q9UMD9 1497 aaPredicted RBP17.33■□□□□ 0.37
NUP98-212ENST00000488828 KIF14Q15058 1648 aa17.32■□□□□ 0.36
NUP98-212ENST00000488828 RAPGEF3O95398 923 aa17.32■□□□□ 0.36
NUP98-212ENST00000488828 TTC37Q6PGP7 1564 aa17.32■□□□□ 0.36
NUP98-212ENST00000488828 FANCAO15360 1455 aa17.31■□□□□ 0.36
NUP98-212ENST00000488828 PLCH2O75038 1416 aa17.31■□□□□ 0.36
NUP98-212ENST00000488828 NEO1Q92859 1461 aa17.31■□□□□ 0.36
NUP98-212ENST00000488828 SPINK5Q9NQ38 1064 aaPredicted RBP17.3■□□□□ 0.36
NUP98-212ENST00000488828 ZNF777Q9ULD5 760 aaPredicted RBP17.3■□□□□ 0.36
NUP98-212ENST00000488828 AKNAQ7Z591 1439 aa17.3■□□□□ 0.36
NUP98-212ENST00000488828 ARHGAP5Q13017 1502 aa17.26■□□□□ 0.35
NUP98-212ENST00000488828 ARAP3Q8WWN8 1544 aa17.26■□□□□ 0.35
NUP98-212ENST00000488828 MYT1LQ9UL68 1186 aa17.26■□□□□ 0.35
NUP98-212ENST00000488828 CCNB3Q8WWL7 1395 aa17.26■□□□□ 0.35
NUP98-212ENST00000488828 CFDP1Q9UEE9 299 aaPredicted RBP17.25■□□□□ 0.35
NUP98-212ENST00000488828 MYO5CQ9NQX4 1742 aa17.24■□□□□ 0.35
NUP98-212ENST00000488828 DENND4BO75064 1496 aaPredicted RBP17.24■□□□□ 0.35
NUP98-212ENST00000488828 SCAPERQ9BY12 1400 aa17.23■□□□□ 0.35
NUP98-212ENST00000488828 CAPN15O75808 1086 aa17.23■□□□□ 0.35
NUP98-212ENST00000488828 CFAP74Q9C0B2 1584 aa17.23■□□□□ 0.35
NUP98-212ENST00000488828 KANK4Q5T7N3 995 aaPredicted RBP17.22■□□□□ 0.35
NUP98-212ENST00000488828 ADGRL1O94910 1474 aa17.22■□□□□ 0.35
NUP98-212ENST00000488828 TIAM1Q13009 1591 aa17.2■□□□□ 0.34
NUP98-212ENST00000488828 EHBP1L1Q8N3D4 1523 aa17.2■□□□□ 0.34
NUP98-212ENST00000488828 GPATCH8Q9UKJ3 1502 aaKnown RBP17.18■□□□□ 0.34
NUP98-212ENST00000488828 AFAP1Q8N556 730 aa17.18■□□□□ 0.34
NUP98-212ENST00000488828 LRRC9Q6ZRR7 1453 aa17.17■□□□□ 0.34
NUP98-212ENST00000488828 ARID4BQ4LE39 1312 aaPredicted RBP17.17■□□□□ 0.34
NUP98-212ENST00000488828 HNRNPMP52272 730 aaKnown RBP eCLIP17.16■□□□□ 0.34
NUP98-212ENST00000488828 NCOA2Q15596 1464 aa17.14■□□□□ 0.33
NUP98-212ENST00000488828 CDC42BPBQ9Y5S2 1711 aa17.14■□□□□ 0.33
NUP98-212ENST00000488828 MAP3K1Q13233 1512 aa17.14■□□□□ 0.33
NUP98-212ENST00000488828 PREX2Q70Z35 1606 aa17.14■□□□□ 0.33
NUP98-212ENST00000488828 ZNF644Q9H582 1327 aaPredicted RBP17.13■□□□□ 0.33
NUP98-212ENST00000488828 CDC42BPAQ5VT25 1732 aa17.13■□□□□ 0.33
NUP98-212ENST00000488828 SUPT6HQ7KZ85 1726 aaKnown RBP17.13■□□□□ 0.33
NUP98-212ENST00000488828 POGZQ7Z3K3 1410 aa17.12■□□□□ 0.33
NUP98-212ENST00000488828 PPARGC1BQ86YN6 1023 aaKnown RBP17.1■□□□□ 0.33
NUP98-212ENST00000488828 ATF5Q9Y2D1 282 aaPredicted RBP17.09■□□□□ 0.33
NUP98-212ENST00000488828 ZNF518AQ6AHZ1 1483 aa17.09■□□□□ 0.33
NUP98-212ENST00000488828 FRMPD1Q5SYB0 1578 aa17.09■□□□□ 0.33
NUP98-212ENST00000488828 RICTORQ6R327 1708 aa17.08■□□□□ 0.32
NUP98-212ENST00000488828 TRAPPC8Q9Y2L5 1435 aa17.08■□□□□ 0.32
NUP98-212ENST00000488828 KDM4FA0A1W2PPD8 638 aa17.08■□□□□ 0.32
NUP98-212ENST00000488828 ZNF219Q9P2Y4 722 aaPredicted RBP17.08■□□□□ 0.32
NUP98-212ENST00000488828 SPAG9O60271 1321 aaKnown RBP17.07■□□□□ 0.32
NUP98-212ENST00000488828 ARHGEF12Q9NZN5 1544 aa17.06■□□□□ 0.32
NUP98-212ENST00000488828 PLEKHH2Q8IVE3 1493 aa17.06■□□□□ 0.32
NUP98-212ENST00000488828 ATXN8OSP0DMR3 200 aa17.06■□□□□ 0.32
NUP98-212ENST00000488828 MAGI2Q86UL8 1455 aa17.05■□□□□ 0.32
NUP98-212ENST00000488828 YEATS2Q9ULM3 1422 aa17.05■□□□□ 0.32
NUP98-212ENST00000488828 ITSN2Q9NZM3 1697 aa17.05■□□□□ 0.32
NUP98-212ENST00000488828 MLECQ14165 292 aa17.05■□□□□ 0.32
NUP98-212ENST00000488828 SAMD9LQ8IVG5 1584 aa17.05■□□□□ 0.32
NUP98-212ENST00000488828 ABCC1P33527 1531 aa17.05■□□□□ 0.32
NUP98-212ENST00000488828 ZFYVE16Q7Z3T8 1539 aa17.05■□□□□ 0.32
NUP98-212ENST00000488828 SYCP2Q9BX26 1530 aa17.04■□□□□ 0.32
NUP98-212ENST00000488828 KIAA1107Q9UPP5 1409 aa17.04■□□□□ 0.32
NUP98-212ENST00000488828 ZMYM4Q5VZL5 1548 aa17.02■□□□□ 0.32
NUP98-212ENST00000488828 TSPY4P0CV99 314 aa17.02■□□□□ 0.32
NUP98-212ENST00000488828 TSPY10P0CW01 314 aa17.02■□□□□ 0.32
NUP98-212ENST00000488828 RSPH4AQ5TD94 716 aa17.02■□□□□ 0.32
NUP98-212ENST00000488828 MYOM3Q5VTT5 1437 aa17.01■□□□□ 0.31
NUP98-212ENST00000488828 ATP10AO60312 1499 aa17■□□□□ 0.31
NUP98-212ENST00000488828 ARHGEF40Q8TER5 1519 aa16.99■□□□□ 0.31
NUP98-212ENST00000488828 CAMSAP2Q08AD1 1489 aa16.99■□□□□ 0.31
NUP98-212ENST00000488828 MLH3Q9UHC1 1453 aa16.99■□□□□ 0.31
NUP98-212ENST00000488828 KDM5CP41229 1560 aa16.98■□□□□ 0.31
NUP98-212ENST00000488828 MIA2Q96PC5 1412 aa16.97■□□□□ 0.31
NUP98-212ENST00000488828 DSG3P32926 999 aa16.97■□□□□ 0.31
NUP98-212ENST00000488828 FAM50AQ14320 339 aaKnown RBP16.97■□□□□ 0.31
NUP98-212ENST00000488828 HECW2Q9P2P5 1572 aa16.97■□□□□ 0.31
NUP98-212ENST00000488828 C9orf84Q5VXU9 1444 aa16.96■□□□□ 0.3
NUP98-212ENST00000488828 MBD5Q9P267 1494 aa16.95■□□□□ 0.3
NUP98-212ENST00000488828 ESF1Q9H501 851 aaKnown RBP16.95■□□□□ 0.3
NUP98-212ENST00000488828 CCDC141Q6ZP82 1450 aa16.93■□□□□ 0.3
NUP98-212ENST00000488828 ABCB7O75027 752 aa16.92■□□□□ 0.3
NUP98-212ENST00000488828 FGD6Q6ZV73 1430 aa16.91■□□□□ 0.3
NUP98-212ENST00000488828 ATP7AQ04656 1500 aa16.91■□□□□ 0.3
NUP98-212ENST00000488828 DIP2CQ9Y2E4 1556 aa16.9■□□□□ 0.3
NUP98-212ENST00000488828 KIDINS220Q9ULH0 1771 aa16.89■□□□□ 0.3
NUP98-212ENST00000488828 CHIC2Q9UKJ5 165 aa16.89■□□□□ 0.29
NUP98-212ENST00000488828 ABCA6Q8N139 1617 aa16.88■□□□□ 0.29
NUP98-212ENST00000488828 GGT6Q6P531 493 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms