RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 ERCC6L2Q5T890 1561 aa9.81□□□□□ -0.84
RN7SL561P-201ENST00000488553 KIF14Q15058 1648 aa9.8□□□□□ -0.84
RN7SL561P-201ENST00000488553 UHRF1BP1LA0JNW5 1464 aa9.79□□□□□ -0.84
RN7SL561P-201ENST00000488553 CAMSAP2Q08AD1 1489 aa9.79□□□□□ -0.84
RN7SL561P-201ENST00000488553 DNMT1P26358 1616 aaKnown RBP9.78□□□□□ -0.84
RN7SL561P-201ENST00000488553 NEUROD1Q13562 356 aa9.78□□□□□ -0.84
RN7SL561P-201ENST00000488553 ZNF777Q9ULD5 760 aaPredicted RBP9.78□□□□□ -0.84
RN7SL561P-201ENST00000488553 ABCC2Q92887 1545 aa9.77□□□□□ -0.84
RN7SL561P-201ENST00000488553 PPP1R15AO75807 674 aaPredicted RBP9.77□□□□□ -0.85
RN7SL561P-201ENST00000488553 ITSN2Q9NZM3 1697 aa9.77□□□□□ -0.85
RN7SL561P-201ENST00000488553 NCOA1Q15788 1441 aa9.76□□□□□ -0.85
RN7SL561P-201ENST00000488553 TRIM52Q96A61 297 aa9.76□□□□□ -0.85
RN7SL561P-201ENST00000488553 MPHOSPH9Q99550 1183 aa9.76□□□□□ -0.85
RN7SL561P-201ENST00000488553 GCC2Q8IWJ2 1684 aa9.75□□□□□ -0.85
RN7SL561P-201ENST00000488553 OSCARQ8IYS5 282 aa9.75□□□□□ -0.85
RN7SL561P-201ENST00000488553 KDM6BO15054 1643 aa9.74□□□□□ -0.85
RN7SL561P-201ENST00000488553 DENND4BO75064 1496 aaPredicted RBP9.74□□□□□ -0.85
RN7SL561P-201ENST00000488553 ADGRL2O95490 1459 aa9.74□□□□□ -0.85
RN7SL561P-201ENST00000488553 KDM5BQ9UGL1 1544 aa9.74□□□□□ -0.85
RN7SL561P-201ENST00000488553 RSPH4AQ5TD94 716 aa9.74□□□□□ -0.85
RN7SL561P-201ENST00000488553 HNRNPMP52272 730 aaKnown RBP eCLIP9.73□□□□□ -0.85
RN7SL561P-201ENST00000488553 ANKRD30AQ9BXX3 1397 aa9.73□□□□□ -0.85
RN7SL561P-201ENST00000488553 MBD5Q9P267 1494 aa9.72□□□□□ -0.85
RN7SL561P-201ENST00000488553 TSPY4P0CV99 314 aa9.72□□□□□ -0.85
RN7SL561P-201ENST00000488553 TSPY10P0CW01 314 aa9.72□□□□□ -0.85
RN7SL561P-201ENST00000488553 CDC42BPAQ5VT25 1732 aa9.72□□□□□ -0.85
RN7SL561P-201ENST00000488553 KCNH8Q96L42 1107 aa9.71□□□□□ -0.86
RN7SL561P-201ENST00000488553 SHANK2Q9UPX8 1470 aa9.71□□□□□ -0.86
RN7SL561P-201ENST00000488553 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.7□□□□□ -0.86
RN7SL561P-201ENST00000488553 ARHGEF5Q12774 1597 aa9.7□□□□□ -0.86
RN7SL561P-201ENST00000488553 PLCH2O75038 1416 aa9.69□□□□□ -0.86
RN7SL561P-201ENST00000488553 C9orf84Q5VXU9 1444 aa9.69□□□□□ -0.86
RN7SL561P-201ENST00000488553 TONSLQ96HA7 1378 aa9.69□□□□□ -0.86
RN7SL561P-201ENST00000488553 ANKRD30BQ9BXX2 1392 aa9.69□□□□□ -0.86
RN7SL561P-201ENST00000488553 KIAA1107Q9UPP5 1409 aa9.68□□□□□ -0.86
RN7SL561P-201ENST00000488553 EFCAB2Q5VUJ9 269 aa9.68□□□□□ -0.86
RN7SL561P-201ENST00000488553 SLC4A1APQ9BWU0 796 aaKnown RBP9.68□□□□□ -0.86
RN7SL561P-201ENST00000488553 ZCCHC11Q5TAX3 1644 aaKnown RBP9.67□□□□□ -0.86
RN7SL561P-201ENST00000488553 PREX2Q70Z35 1606 aa9.67□□□□□ -0.86
RN7SL561P-201ENST00000488553 SAMD9LQ8IVG5 1584 aa9.67□□□□□ -0.86
RN7SL561P-201ENST00000488553 ANKRD50Q9ULJ7 1429 aa9.67□□□□□ -0.86
RN7SL561P-201ENST00000488553 CROCC2H7BZ55 1655 aa9.67□□□□□ -0.86
RN7SL561P-201ENST00000488553 PZPP20742 1482 aa9.66□□□□□ -0.86
RN7SL561P-201ENST00000488553 PLEKHH2Q8IVE3 1493 aa9.66□□□□□ -0.86
RN7SL561P-201ENST00000488553 CDC42BPBQ9Y5S2 1711 aa9.66□□□□□ -0.86
RN7SL561P-201ENST00000488553 FOXD1Q16676 465 aa9.66□□□□□ -0.86
RN7SL561P-201ENST00000488553 MIER1Q8N108 512 aa9.66□□□□□ -0.86
RN7SL561P-201ENST00000488553 ADGBQ8N7X0 1667 aa9.66□□□□□ -0.86
RN7SL561P-201ENST00000488553 TTC37Q6PGP7 1564 aa9.66□□□□□ -0.86
RN7SL561P-201ENST00000488553 CCDC141Q6ZP82 1450 aa9.66□□□□□ -0.86
RN7SL561P-201ENST00000488553 ARHGAP5Q13017 1502 aa9.65□□□□□ -0.86
RN7SL561P-201ENST00000488553 KIF15Q9NS87 1388 aa9.63□□□□□ -0.87
RN7SL561P-201ENST00000488553 PKD2Q13563 968 aa9.63□□□□□ -0.87
RN7SL561P-201ENST00000488553 L3MBTL2Q969R5 705 aa9.63□□□□□ -0.87
RN7SL561P-201ENST00000488553 MAST1Q9Y2H9 1570 aa9.63□□□□□ -0.87
RN7SL561P-201ENST00000488553 NUP155O75694 1391 aa9.63□□□□□ -0.87
RN7SL561P-201ENST00000488553 ARHGEF12Q9NZN5 1544 aa9.62□□□□□ -0.87
RN7SL561P-201ENST00000488553 RPRD2Q5VT52 1461 aaKnown RBP9.62□□□□□ -0.87
RN7SL561P-201ENST00000488553 WDR7Q9Y4E6 1490 aa9.62□□□□□ -0.87
RN7SL561P-201ENST00000488553 ARAP3Q8WWN8 1544 aa9.61□□□□□ -0.87
RN7SL561P-201ENST00000488553 NPM1P06748 294 aaKnown RBP eCLIP9.61□□□□□ -0.87
RN7SL561P-201ENST00000488553 MYO5CQ9NQX4 1742 aa9.61□□□□□ -0.87
RN7SL561P-201ENST00000488553 SYCP2Q9BX26 1530 aa9.61□□□□□ -0.87
RN7SL561P-201ENST00000488553 KDM5DQ9BY66 1539 aa9.6□□□□□ -0.87
RN7SL561P-201ENST00000488553 ASXL2Q76L83 1435 aa9.59□□□□□ -0.87
RN7SL561P-201ENST00000488553 RTEL1-TNFRSF6BF6WH68 1400 aa9.58□□□□□ -0.88
RN7SL561P-201ENST00000488553 TRAPPC8Q9Y2L5 1435 aa9.58□□□□□ -0.88
RN7SL561P-201ENST00000488553 ABCC1P33527 1531 aa9.57□□□□□ -0.88
RN7SL561P-201ENST00000488553 ABCA9Q8IUA7 1624 aa9.56□□□□□ -0.88
RN7SL561P-201ENST00000488553 NBPF8Q3BBV2 869 aa9.56□□□□□ -0.88
RN7SL561P-201ENST00000488553 AFAP1Q8N556 730 aa9.56□□□□□ -0.88
RN7SL561P-201ENST00000488553 HIRIP3Q9BW71 556 aaPredicted RBP9.56□□□□□ -0.88
RN7SL561P-201ENST00000488553 DUOX2Q9NRD8 1548 aa9.56□□□□□ -0.88
RN7SL561P-201ENST00000488553 SPAG9O60271 1321 aaKnown RBP9.56□□□□□ -0.88
RN7SL561P-201ENST00000488553 PLXNC1O60486 1568 aa9.55□□□□□ -0.88
RN7SL561P-201ENST00000488553 TEX14Q8IWB6 1497 aa9.55□□□□□ -0.88
RN7SL561P-201ENST00000488553 DDX10Q13206 875 aaKnown RBP9.55□□□□□ -0.88
RN7SL561P-201ENST00000488553 FANCAO15360 1455 aa9.54□□□□□ -0.88
RN7SL561P-201ENST00000488553 HSPA5P11021 654 aaKnown RBP9.54□□□□□ -0.88
RN7SL561P-201ENST00000488553 ERBINQ96RT1 1412 aa9.54□□□□□ -0.88
RN7SL561P-201ENST00000488553 FAM135AQ9P2D6 1515 aa9.53□□□□□ -0.88
RN7SL561P-201ENST00000488553 EIF4G2P78344 907 aaKnown RBP eCLIP9.53□□□□□ -0.88
RN7SL561P-201ENST00000488553 SCAPERQ9BY12 1400 aa9.53□□□□□ -0.88
RN7SL561P-201ENST00000488553 UNC13BO14795 1591 aa9.52□□□□□ -0.89
RN7SL561P-201ENST00000488553 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.52□□□□□ -0.89
RN7SL561P-201ENST00000488553 CENPBP07199 599 aaPredicted RBP9.51□□□□□ -0.89
RN7SL561P-201ENST00000488553 UHRF1BP1Q6BDS2 1440 aa9.5□□□□□ -0.89
RN7SL561P-201ENST00000488553 CD109Q6YHK3 1445 aa9.5□□□□□ -0.89
RN7SL561P-201ENST00000488553 ADGRL1O94910 1474 aa9.5□□□□□ -0.89
RN7SL561P-201ENST00000488553 PLA2R1Q13018 1463 aa9.5□□□□□ -0.89
RN7SL561P-201ENST00000488553 MAGI2Q86UL8 1455 aa9.5□□□□□ -0.89
RN7SL561P-201ENST00000488553 DHX29Q7Z478 1369 aaKnown RBP9.49□□□□□ -0.89
RN7SL561P-201ENST00000488553 SPATA31E1Q6ZUB1 1445 aa9.48□□□□□ -0.89
RN7SL561P-201ENST00000488553 ATP10AO60312 1499 aa9.48□□□□□ -0.89
RN7SL561P-201ENST00000488553 ZFYVE16Q7Z3T8 1539 aa9.48□□□□□ -0.89
RN7SL561P-201ENST00000488553 CYB5RLQ6IPT4 315 aa9.48□□□□□ -0.89
RN7SL561P-201ENST00000488553 WASHC2AQ641Q2 1341 aa9.48□□□□□ -0.89
RN7SL561P-201ENST00000488553 IQGAP3Q86VI3 1631 aa9.48□□□□□ -0.89
RN7SL561P-201ENST00000488553 C11orf95C9JLR9 678 aaPredicted RBP9.47□□□□□ -0.89
RN7SL561P-201ENST00000488553 ATP7AQ04656 1500 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms