RNA–Protein interactions for RNA: ENST00000488203.1

CIT-205, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 2

Gene CIT, Length 2,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-205ENST00000488203 DAPK1P53355 1430 aa13.95□□□□□ -0.18
CIT-205ENST00000488203 TRIM52Q96A61 297 aa13.95□□□□□ -0.18
CIT-205ENST00000488203 KDM6BO15054 1643 aa13.95□□□□□ -0.18
CIT-205ENST00000488203 SHROOM2Q13796 1616 aa13.92□□□□□ -0.18
CIT-205ENST00000488203 CAMSAP2Q08AD1 1489 aa13.91□□□□□ -0.18
CIT-205ENST00000488203 ADCY10Q96PN6 1610 aa13.9□□□□□ -0.18
CIT-205ENST00000488203 DNMT1P26358 1616 aaKnown RBP13.9□□□□□ -0.19
CIT-205ENST00000488203 MIER1Q8N108 512 aa13.89□□□□□ -0.19
CIT-205ENST00000488203 GCC2Q8IWJ2 1684 aa13.89□□□□□ -0.19
CIT-205ENST00000488203 AKNAQ7Z591 1439 aa13.89□□□□□ -0.19
CIT-205ENST00000488203 ABCC10Q5T3U5 1492 aa13.88□□□□□ -0.19
CIT-205ENST00000488203 FOXD1Q16676 465 aa13.88□□□□□ -0.19
CIT-205ENST00000488203 ROCK1Q13464 1354 aa13.87□□□□□ -0.19
CIT-205ENST00000488203 CLASP1Q7Z460 1538 aa13.87□□□□□ -0.19
CIT-205ENST00000488203 MPHOSPH9Q99550 1183 aa13.87□□□□□ -0.19
CIT-205ENST00000488203 DENND4BO75064 1496 aaPredicted RBP13.86□□□□□ -0.19
CIT-205ENST00000488203 ITSN2Q9NZM3 1697 aa13.86□□□□□ -0.19
CIT-205ENST00000488203 PPP1R15AO75807 674 aaPredicted RBP13.86□□□□□ -0.19
CIT-205ENST00000488203 HNRNPMP52272 730 aaKnown RBP eCLIP13.84□□□□□ -0.19
CIT-205ENST00000488203 KCNH8Q96L42 1107 aa13.84□□□□□ -0.19
CIT-205ENST00000488203 TIMELESSQ9UNS1 1208 aa13.84□□□□□ -0.19
CIT-205ENST00000488203 CDC42BPAQ5VT25 1732 aa13.84□□□□□ -0.19
CIT-205ENST00000488203 TONSLQ96HA7 1378 aa13.84□□□□□ -0.19
CIT-205ENST00000488203 HIRIP3Q9BW71 556 aaPredicted RBP13.82□□□□□ -0.2
CIT-205ENST00000488203 NCOA1Q15788 1441 aa13.82□□□□□ -0.2
CIT-205ENST00000488203 ABCC2Q92887 1545 aa13.82□□□□□ -0.2
CIT-205ENST00000488203 SLC4A1APQ9BWU0 796 aaKnown RBP13.79□□□□□ -0.2
CIT-205ENST00000488203 ANKRD30AQ9BXX3 1397 aa13.78□□□□□ -0.2
CIT-205ENST00000488203 TSPY4P0CV99 314 aa13.77□□□□□ -0.21
CIT-205ENST00000488203 TSPY10P0CW01 314 aa13.77□□□□□ -0.21
CIT-205ENST00000488203 YTHDC1Q96MU7 727 aaKnown RBP13.77□□□□□ -0.21
CIT-205ENST00000488203 C9orf84Q5VXU9 1444 aa13.76□□□□□ -0.21
CIT-205ENST00000488203 ADGRL2O95490 1459 aa13.76□□□□□ -0.21
CIT-205ENST00000488203 TTC37Q6PGP7 1564 aa13.76□□□□□ -0.21
CIT-205ENST00000488203 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.76□□□□□ -0.21
CIT-205ENST00000488203 CROCC2H7BZ55 1655 aa13.75□□□□□ -0.21
CIT-205ENST00000488203 MBD5Q9P267 1494 aa13.75□□□□□ -0.21
CIT-205ENST00000488203 ADGBQ8N7X0 1667 aa13.75□□□□□ -0.21
CIT-205ENST00000488203 CDC42BPBQ9Y5S2 1711 aa13.74□□□□□ -0.21
CIT-205ENST00000488203 SAMD9LQ8IVG5 1584 aa13.74□□□□□ -0.21
CIT-205ENST00000488203 KDM5BQ9UGL1 1544 aa13.74□□□□□ -0.21
CIT-205ENST00000488203 ANKRD30BQ9BXX2 1392 aa13.74□□□□□ -0.21
CIT-205ENST00000488203 ANKRD50Q9ULJ7 1429 aa13.73□□□□□ -0.21
CIT-205ENST00000488203 PZPP20742 1482 aa13.73□□□□□ -0.21
CIT-205ENST00000488203 ZCCHC11Q5TAX3 1644 aaKnown RBP13.73□□□□□ -0.21
CIT-205ENST00000488203 ARHGAP5Q13017 1502 aa13.73□□□□□ -0.21
CIT-205ENST00000488203 PREX2Q70Z35 1606 aa13.73□□□□□ -0.21
CIT-205ENST00000488203 L3MBTL2Q969R5 705 aa13.73□□□□□ -0.21
CIT-205ENST00000488203 UHRF1BP1LA0JNW5 1464 aa13.72□□□□□ -0.21
CIT-205ENST00000488203 SHANK2Q9UPX8 1470 aa13.71□□□□□ -0.21
CIT-205ENST00000488203 KIF15Q9NS87 1388 aa13.71□□□□□ -0.21
CIT-205ENST00000488203 OSCARQ8IYS5 282 aa13.71□□□□□ -0.21
CIT-205ENST00000488203 DDX10Q13206 875 aaKnown RBP13.7□□□□□ -0.22
CIT-205ENST00000488203 PKD2Q13563 968 aa13.7□□□□□ -0.22
CIT-205ENST00000488203 SYCP2Q9BX26 1530 aa13.7□□□□□ -0.22
CIT-205ENST00000488203 CCDC141Q6ZP82 1450 aa13.69□□□□□ -0.22
CIT-205ENST00000488203 NUP155O75694 1391 aa13.69□□□□□ -0.22
CIT-205ENST00000488203 ARHGEF5Q12774 1597 aa13.69□□□□□ -0.22
CIT-205ENST00000488203 RSPH4AQ5TD94 716 aa13.66□□□□□ -0.22
CIT-205ENST00000488203 ARHGEF12Q9NZN5 1544 aa13.66□□□□□ -0.22
CIT-205ENST00000488203 PLCH2O75038 1416 aa13.66□□□□□ -0.22
CIT-205ENST00000488203 RPRD2Q5VT52 1461 aaKnown RBP13.66□□□□□ -0.22
CIT-205ENST00000488203 EFCAB2Q5VUJ9 269 aa13.65□□□□□ -0.22
CIT-205ENST00000488203 KIAA1107Q9UPP5 1409 aa13.65□□□□□ -0.22
CIT-205ENST00000488203 MYO5CQ9NQX4 1742 aa13.65□□□□□ -0.22
CIT-205ENST00000488203 NBPF8Q3BBV2 869 aa13.65□□□□□ -0.22
CIT-205ENST00000488203 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.63□□□□□ -0.236e-7■■■■□ 21.7
CIT-205ENST00000488203 HSPA5P11021 654 aaKnown RBP13.62□□□□□ -0.23
CIT-205ENST00000488203 TRAPPC8Q9Y2L5 1435 aa13.61□□□□□ -0.23
CIT-205ENST00000488203 TEX14Q8IWB6 1497 aa13.61□□□□□ -0.23
CIT-205ENST00000488203 WDR7Q9Y4E6 1490 aa13.61□□□□□ -0.23
CIT-205ENST00000488203 PLEKHH2Q8IVE3 1493 aa13.6□□□□□ -0.23
CIT-205ENST00000488203 AFAP1Q8N556 730 aa13.6□□□□□ -0.23
CIT-205ENST00000488203 ASXL2Q76L83 1435 aa13.58□□□□□ -0.23
CIT-205ENST00000488203 ZNF326Q5BKZ1 582 aaKnown RBP13.58□□□□□ -0.24
CIT-205ENST00000488203 MAST1Q9Y2H9 1570 aa13.57□□□□□ -0.24
CIT-205ENST00000488203 EIF4G2P78344 907 aaKnown RBP eCLIP13.57□□□□□ -0.24
CIT-205ENST00000488203 ABCC1P33527 1531 aa13.56□□□□□ -0.24
CIT-205ENST00000488203 KDM5DQ9BY66 1539 aa13.56□□□□□ -0.24
CIT-205ENST00000488203 NPM1P06748 294 aaKnown RBP eCLIP13.56□□□□□ -0.24
CIT-205ENST00000488203 SPAG9O60271 1321 aaKnown RBP13.55□□□□□ -0.24
CIT-205ENST00000488203 FAM135AQ9P2D6 1515 aa13.55□□□□□ -0.24
CIT-205ENST00000488203 WASHC2AQ641Q2 1341 aa13.54□□□□□ -0.24
CIT-205ENST00000488203 C11orf95C9JLR9 678 aaPredicted RBP13.53□□□□□ -0.24
CIT-205ENST00000488203 FANCAO15360 1455 aa13.53□□□□□ -0.24
CIT-205ENST00000488203 KDM2AQ9Y2K7 1162 aa13.53□□□□□ -0.24
CIT-205ENST00000488203 PLXNC1O60486 1568 aa13.52□□□□□ -0.25
CIT-205ENST00000488203 MYT1LQ9UL68 1186 aa13.52□□□□□ -0.25
CIT-205ENST00000488203 DUOX2Q9NRD8 1548 aa13.51□□□□□ -0.25
CIT-205ENST00000488203 BCL11AQ9H165 835 aa13.5□□□□□ -0.25
CIT-205ENST00000488203 ABCA9Q8IUA7 1624 aa13.5□□□□□ -0.25
CIT-205ENST00000488203 SCAPERQ9BY12 1400 aa13.49□□□□□ -0.25
CIT-205ENST00000488203 ARAP3Q8WWN8 1544 aa13.49□□□□□ -0.25
CIT-205ENST00000488203 ANP32CO43423 234 aa13.49□□□□□ -0.25
CIT-205ENST00000488203 DCAF11Q8TEB1 546 aa13.49□□□□□ -0.25
CIT-205ENST00000488203 UNC13BO14795 1591 aa13.49□□□□□ -0.25
CIT-205ENST00000488203 RGL3Q3MIN7 710 aa13.48□□□□□ -0.25
CIT-205ENST00000488203 ERBINQ96RT1 1412 aa13.48□□□□□ -0.25
CIT-205ENST00000488203 ANP32EQ9BTT0 268 aa13.48□□□□□ -0.25
CIT-205ENST00000488203 ADGRL1O94910 1474 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms