RNA–Protein interactions for RNA: ENST00000488180.1

SP100-216, Transcript of SP100 nuclear antigen, humanhuman

TSL 2

Gene SP100, Length 3,333 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP100-216ENST00000488180 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.92□□□□□ -1.46
SP100-216ENST00000488180 TDRD9Q8NDG6 1382 aaKnown RBP5.92□□□□□ -1.46
SP100-216ENST00000488180 PREX1Q8TCU6 1659 aa5.92□□□□□ -1.46
SP100-216ENST00000488180 FHOD3Q2V2M9 1422 aa5.92□□□□□ -1.46
SP100-216ENST00000488180 HECW2Q9P2P5 1572 aa5.92□□□□□ -1.46
SP100-216ENST00000488180 VWDEQ8N2E2 1590 aa5.91□□□□□ -1.46
SP100-216ENST00000488180 EHBP1L1Q8N3D4 1523 aa5.91□□□□□ -1.46
SP100-216ENST00000488180 KIDINS220Q9ULH0 1771 aa5.9□□□□□ -1.46
SP100-216ENST00000488180 CASKIN1Q8WXD9 1431 aa5.89□□□□□ -1.47
SP100-216ENST00000488180 IQSEC2Q5JU85 1478 aa5.88□□□□□ -1.47
SP100-216ENST00000488180 LMTK3Q96Q04 1460 aa5.88□□□□□ -1.47
SP100-216ENST00000488180 DIP2CQ9Y2E4 1556 aa5.88□□□□□ -1.47
SP100-216ENST00000488180 SUPT5HO00267 1087 aaKnown RBP5.88□□□□□ -1.47
SP100-216ENST00000488180 SHANK2Q9UPX8 1470 aa5.88□□□□□ -1.47
SP100-216ENST00000488180 ABCA6Q8N139 1617 aa5.88□□□□□ -1.47
SP100-216ENST00000488180 ARHGAP35Q9NRY4 1499 aa5.88□□□□□ -1.47
SP100-216ENST00000488180 TIAM1Q13009 1591 aa5.87□□□□□ -1.47
SP100-216ENST00000488180 MROH1Q8NDA8 1641 aa5.87□□□□□ -1.47
SP100-216ENST00000488180 SUPT6HQ7KZ85 1726 aaKnown RBP5.87□□□□□ -1.47
SP100-216ENST00000488180 ATP10BO94823 1461 aa5.87□□□□□ -1.47
SP100-216ENST00000488180 TCOF1Q13428 1488 aaKnown RBP5.87□□□□□ -1.47
SP100-216ENST00000488180 C1QBPQ07021 282 aaKnown RBP5.86□□□□□ -1.47
SP100-216ENST00000488180 LMTK2Q8IWU2 1503 aa5.86□□□□□ -1.47
SP100-216ENST00000488180 MLH3Q9UHC1 1453 aa5.86□□□□□ -1.47
SP100-216ENST00000488180 GCC2Q8IWJ2 1684 aa5.86□□□□□ -1.47
SP100-216ENST00000488180 IQGAP3Q86VI3 1631 aa5.86□□□□□ -1.47
SP100-216ENST00000488180 UNC13BO14795 1591 aa5.86□□□□□ -1.47
SP100-216ENST00000488180 SAMD9LQ8IVG5 1584 aa5.86□□□□□ -1.47
SP100-216ENST00000488180 ASXL2Q76L83 1435 aa5.85□□□□□ -1.47
SP100-216ENST00000488180 POLR1AO95602 1720 aaPredicted RBP5.85□□□□□ -1.47
SP100-216ENST00000488180 NCOA2Q15596 1464 aa5.85□□□□□ -1.47
SP100-216ENST00000488180 FMN1Q68DA7 1419 aa5.85□□□□□ -1.47
SP100-216ENST00000488180 ZFYVE16Q7Z3T8 1539 aa5.84□□□□□ -1.47
SP100-216ENST00000488180 KIAA1107Q9UPP5 1409 aa5.84□□□□□ -1.47
SP100-216ENST00000488180 PIK3C2BO00750 1634 aa5.84□□□□□ -1.48
SP100-216ENST00000488180 LAMC1P11047 1609 aa5.83□□□□□ -1.48
SP100-216ENST00000488180 C3P01024 1663 aa5.83□□□□□ -1.48
SP100-216ENST00000488180 PRDM15P57071 1507 aaPredicted RBP5.83□□□□□ -1.48
SP100-216ENST00000488180 DNMT1P26358 1616 aaKnown RBP5.83□□□□□ -1.48
SP100-216ENST00000488180 PLEKHH2Q8IVE3 1493 aa5.82□□□□□ -1.48
SP100-216ENST00000488180 CEP162Q5TB80 1403 aa5.82□□□□□ -1.48
SP100-216ENST00000488180 DMRT2Q9Y5R5 561 aa5.82□□□□□ -1.48
SP100-216ENST00000488180 RTEL1-TNFRSF6BF6WH68 1400 aa5.81□□□□□ -1.48
SP100-216ENST00000488180 PRAG1Q86YV5 1406 aa5.81□□□□□ -1.48
SP100-216ENST00000488180 POGZQ7Z3K3 1410 aa5.81□□□□□ -1.48
SP100-216ENST00000488180 ADGRL2O95490 1459 aa5.8□□□□□ -1.48
SP100-216ENST00000488180 MADDQ8WXG6 1647 aa5.8□□□□□ -1.48
SP100-216ENST00000488180 SYNMO15061 1565 aa5.8□□□□□ -1.48
SP100-216ENST00000488180 ZEB1P37275 1124 aaPredicted RBP5.8□□□□□ -1.48
SP100-216ENST00000488180 RIMS1Q86UR5 1692 aaKnown RBP5.8□□□□□ -1.48
SP100-216ENST00000488180 IFT172Q9UG01 1749 aa5.8□□□□□ -1.48
SP100-216ENST00000488180 PLCH2O75038 1416 aa5.79□□□□□ -1.48
SP100-216ENST00000488180 MYO3AQ8NEV4 1616 aa5.79□□□□□ -1.48
SP100-216ENST00000488180 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.79□□□□□ -1.48
SP100-216ENST00000488180 PTPRGP23470 1445 aa5.79□□□□□ -1.48
SP100-216ENST00000488180 TRIM26Q12899 539 aaPredicted RBP5.79□□□□□ -1.48
SP100-216ENST00000488180 ACIN1Q9UKV3 1341 aaKnown RBP5.79□□□□□ -1.48
SP100-216ENST00000488180 STRCQ7RTU9 1775 aa5.78□□□□□ -1.48
SP100-216ENST00000488180 TROQ12816 1431 aaPredicted RBP5.78□□□□□ -1.48
SP100-216ENST00000488180 NWD1Q149M9 1564 aa5.78□□□□□ -1.48
SP100-216ENST00000488180 RNF39Q9H2S5 420 aa5.77□□□□□ -1.48
SP100-216ENST00000488180 AKNAQ7Z591 1439 aa5.77□□□□□ -1.49
SP100-216ENST00000488180 SPATA31D1Q6ZQQ2 1576 aa5.77□□□□□ -1.49
SP100-216ENST00000488180 UGGT1Q9NYU2 1555 aa5.77□□□□□ -1.49
SP100-216ENST00000488180 TSPOAP1O95153 1857 aa5.77□□□□□ -1.49
SP100-216ENST00000488180 GTF3C3Q9Y5Q9 886 aa5.76□□□□□ -1.49
SP100-216ENST00000488180 SETD1AO15047 1707 aaKnown RBP5.76□□□□□ -1.49
SP100-216ENST00000488180 CAMSAP1Q5T5Y3 1602 aa5.76□□□□□ -1.49
SP100-216ENST00000488180 NEUROD1Q13562 356 aa5.76□□□□□ -1.49
SP100-216ENST00000488180 NPATQ14207 1427 aa5.76□□□□□ -1.49
SP100-216ENST00000488180 JPH4Q96JJ6 628 aa5.76□□□□□ -1.49
SP100-216ENST00000488180 ZNF518AQ6AHZ1 1483 aa5.75□□□□□ -1.49
SP100-216ENST00000488180 EFCAB6Q5THR3 1501 aa5.75□□□□□ -1.49
SP100-216ENST00000488180 KNDC1Q76NI1 1749 aa5.75□□□□□ -1.49
SP100-216ENST00000488180 TET3O43151 1660 aa5.74□□□□□ -1.49
SP100-216ENST00000488180 MIA2Q96PC5 1412 aa5.74□□□□□ -1.49
SP100-216ENST00000488180 COL17A1Q9UMD9 1497 aaPredicted RBP5.74□□□□□ -1.49
SP100-216ENST00000488180 PLA2R1Q13018 1463 aa5.74□□□□□ -1.49
SP100-216ENST00000488180 MBD5Q9P267 1494 aa5.74□□□□□ -1.49
SP100-216ENST00000488180 CHMP7Q8WUX9 453 aaPredicted RBP5.73□□□□□ -1.49
SP100-216ENST00000488180 ATP7AQ04656 1500 aa5.73□□□□□ -1.49
SP100-216ENST00000488180 C9orf84Q5VXU9 1444 aa5.73□□□□□ -1.49
SP100-216ENST00000488180 FANCAO15360 1455 aa5.73□□□□□ -1.49
SP100-216ENST00000488180 DIP2AQ14689 1571 aa5.73□□□□□ -1.49
SP100-216ENST00000488180 CD109Q6YHK3 1445 aa5.73□□□□□ -1.49
SP100-216ENST00000488180 UBR1Q8IWV7 1749 aa5.73□□□□□ -1.49
SP100-216ENST00000488180 ALKQ9UM73 1620 aa5.72□□□□□ -1.49
SP100-216ENST00000488180 TTBK1Q5TCY1 1321 aaPredicted RBP5.72□□□□□ -1.49
SP100-216ENST00000488180 CENPBP07199 599 aaPredicted RBP5.72□□□□□ -1.49
SP100-216ENST00000488180 ARHGAP31Q2M1Z3 1444 aa5.71□□□□□ -1.49
SP100-216ENST00000488180 LOC105371045A0A1W2PR82 267 aa5.71□□□□□ -1.5
SP100-216ENST00000488180 CEP152O94986 1710 aa5.71□□□□□ -1.5
SP100-216ENST00000488180 XIRP1Q702N8 1843 aaKnown RBP5.71□□□□□ -1.5
SP100-216ENST00000488180 GPATCH8Q9UKJ3 1502 aaKnown RBP5.7□□□□□ -1.5
SP100-216ENST00000488180 CNTLNQ9NXG0 1405 aa5.7□□□□□ -1.5
SP100-216ENST00000488180 MED14O60244 1454 aa5.7□□□□□ -1.5
SP100-216ENST00000488180 USP54Q70EL1 1684 aa5.69□□□□□ -1.5
SP100-216ENST00000488180 ADGRL1O94910 1474 aa5.69□□□□□ -1.5
SP100-216ENST00000488180 ATP10AO60312 1499 aa5.69□□□□□ -1.5
SP100-216ENST00000488180 SLIT1O75093 1534 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms