RNA–Protein interactions for RNA: ENST00000487721.1

SFXN3-206, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-206ENST00000487721 TTC37Q6PGP7 1564 aa19.25■□□□□ 0.67
SFXN3-206ENST00000487721 BCORL1Q5H9F3 1711 aa19.25■□□□□ 0.67
SFXN3-206ENST00000487721 APLP2Q06481 763 aa19.23■□□□□ 0.67
SFXN3-206ENST00000487721 PLPPR3Q6T4P5 718 aa19.23■□□□□ 0.67
SFXN3-206ENST00000487721 SCAPERQ9BY12 1400 aa19.23■□□□□ 0.67
SFXN3-206ENST00000487721 CFAP74Q9C0B2 1584 aa19.22■□□□□ 0.67
SFXN3-206ENST00000487721 MLECQ14165 292 aa19.21■□□□□ 0.67
SFXN3-206ENST00000487721 RICTORQ6R327 1708 aa19.21■□□□□ 0.67
SFXN3-206ENST00000487721 POGZQ7Z3K3 1410 aa19.21■□□□□ 0.67
SFXN3-206ENST00000487721 FBXO41Q8TF61 875 aa19.21■□□□□ 0.67
SFXN3-206ENST00000487721 YEATS2Q9ULM3 1422 aa19.21■□□□□ 0.67
SFXN3-206ENST00000487721 MADDQ8WXG6 1647 aa19.21■□□□□ 0.67
SFXN3-206ENST00000487721 ARHGEF40Q8TER5 1519 aa19.2■□□□□ 0.66
SFXN3-206ENST00000487721 MAGI2Q86UL8 1455 aa19.2■□□□□ 0.66
SFXN3-206ENST00000487721 LRRIQ1Q96JM4 1722 aa19.2■□□□□ 0.66
SFXN3-206ENST00000487721 ARHGAP5Q13017 1502 aa19.19■□□□□ 0.66
SFXN3-206ENST00000487721 CCNB3Q8WWL7 1395 aa19.18■□□□□ 0.66
SFXN3-206ENST00000487721 ZMYM4Q5VZL5 1548 aa19.17■□□□□ 0.66
SFXN3-206ENST00000487721 ZFYVE16Q7Z3T8 1539 aa19.17■□□□□ 0.66
SFXN3-206ENST00000487721 HSPA2P54652 639 aa19.16■□□□□ 0.66
SFXN3-206ENST00000487721 LMTK3Q96Q04 1460 aa19.16■□□□□ 0.66
SFXN3-206ENST00000487721 CFDP1Q9UEE9 299 aaPredicted RBP19.15■□□□□ 0.66
SFXN3-206ENST00000487721 ZNF777Q9ULD5 760 aaPredicted RBP19.15■□□□□ 0.66
SFXN3-206ENST00000487721 EHBP1L1Q8N3D4 1523 aa19.14■□□□□ 0.65
SFXN3-206ENST00000487721 MYO5CQ9NQX4 1742 aa19.14■□□□□ 0.65
SFXN3-206ENST00000487721 AFAP1Q8N556 730 aa19.13■□□□□ 0.65
SFXN3-206ENST00000487721 RIMS1Q86UR5 1692 aaKnown RBP19.13■□□□□ 0.65
SFXN3-206ENST00000487721 ATP10AO60312 1499 aa19.12■□□□□ 0.65
SFXN3-206ENST00000487721 MYT1LQ9UL68 1186 aa19.11■□□□□ 0.65
SFXN3-206ENST00000487721 GPATCH8Q9UKJ3 1502 aaKnown RBP19.1■□□□□ 0.65
SFXN3-206ENST00000487721 TIAM1Q13009 1591 aa19.09■□□□□ 0.65
SFXN3-206ENST00000487721 MAP3K1Q13233 1512 aa19.09■□□□□ 0.65
SFXN3-206ENST00000487721 SIGLEC1Q9BZZ2 1709 aa19.08■□□□□ 0.64
SFXN3-206ENST00000487721 ZNF518AQ6AHZ1 1483 aa19.07■□□□□ 0.64
SFXN3-206ENST00000487721 LRRC9Q6ZRR7 1453 aa19.07■□□□□ 0.64
SFXN3-206ENST00000487721 C9orf84Q5VXU9 1444 aa19.07■□□□□ 0.64
SFXN3-206ENST00000487721 CEBPAP49715 358 aaPredicted RBP19.06■□□□□ 0.64
SFXN3-206ENST00000487721 PREX2Q70Z35 1606 aa19.06■□□□□ 0.64
SFXN3-206ENST00000487721 NCOA2Q15596 1464 aa19.04■□□□□ 0.64
SFXN3-206ENST00000487721 PLEKHH2Q8IVE3 1493 aa19.04■□□□□ 0.64
SFXN3-206ENST00000487721 KANK4Q5T7N3 995 aaPredicted RBP19.04■□□□□ 0.64
SFXN3-206ENST00000487721 HNRNPMP52272 730 aaKnown RBP eCLIP19.02■□□□□ 0.64
SFXN3-206ENST00000487721 KIAA1107Q9UPP5 1409 aa19.01■□□□□ 0.63
SFXN3-206ENST00000487721 ARHGEF12Q9NZN5 1544 aa19.01■□□□□ 0.63
SFXN3-206ENST00000487721 CDC42BPBQ9Y5S2 1711 aa19.01■□□□□ 0.63
SFXN3-206ENST00000487721 SUPT6HQ7KZ85 1726 aaKnown RBP19■□□□□ 0.63
SFXN3-206ENST00000487721 ABCC1P33527 1531 aa19■□□□□ 0.63
SFXN3-206ENST00000487721 CDC42BPAQ5VT25 1732 aa18.99■□□□□ 0.63
SFXN3-206ENST00000487721 TRAPPC8Q9Y2L5 1435 aa18.99■□□□□ 0.63
SFXN3-206ENST00000487721 CERKQ8TCT0 537 aa18.98■□□□□ 0.63
SFXN3-206ENST00000487721 SPAG9O60271 1321 aaKnown RBP18.98■□□□□ 0.63
SFXN3-206ENST00000487721 FER1L4A9Z1Z3 1794 aa18.97■□□□□ 0.63
SFXN3-206ENST00000487721 RSPH4AQ5TD94 716 aa18.97■□□□□ 0.63
SFXN3-206ENST00000487721 SENP3Q9H4L4 574 aaPredicted RBP18.96■□□□□ 0.63
SFXN3-206ENST00000487721 KDM5CP41229 1560 aa18.96■□□□□ 0.63
SFXN3-206ENST00000487721 ZNF644Q9H582 1327 aaPredicted RBP18.96■□□□□ 0.63
SFXN3-206ENST00000487721 MLH3Q9UHC1 1453 aa18.96■□□□□ 0.63
SFXN3-206ENST00000487721 ESF1Q9H501 851 aaKnown RBP18.95■□□□□ 0.62
SFXN3-206ENST00000487721 SAMD9LQ8IVG5 1584 aa18.94■□□□□ 0.62
SFXN3-206ENST00000487721 ITSN2Q9NZM3 1697 aa18.94■□□□□ 0.62
SFXN3-206ENST00000487721 DMRT2Q9Y5R5 561 aa18.93■□□□□ 0.62
SFXN3-206ENST00000487721 SYCP2Q9BX26 1530 aa18.93■□□□□ 0.62
SFXN3-206ENST00000487721 TSPY4P0CV99 314 aa18.91■□□□□ 0.62
SFXN3-206ENST00000487721 TSPY10P0CW01 314 aa18.91■□□□□ 0.62
SFXN3-206ENST00000487721 MYOM3Q5VTT5 1437 aa18.91■□□□□ 0.62
SFXN3-206ENST00000487721 DIP2CQ9Y2E4 1556 aa18.9■□□□□ 0.62
SFXN3-206ENST00000487721 MIA2Q96PC5 1412 aa18.9■□□□□ 0.62
SFXN3-206ENST00000487721 UHRF1BP1Q6BDS2 1440 aa18.89■□□□□ 0.61
SFXN3-206ENST00000487721 CAMSAP2Q08AD1 1489 aa18.87■□□□□ 0.61
SFXN3-206ENST00000487721 MBD5Q9P267 1494 aa18.87■□□□□ 0.61
SFXN3-206ENST00000487721 REREQ9P2R6 1566 aa18.87■□□□□ 0.61
SFXN3-206ENST00000487721 AGLP35573 1532 aa18.86■□□□□ 0.61
SFXN3-206ENST00000487721 PREX1Q8TCU6 1659 aa18.85■□□□□ 0.61
SFXN3-206ENST00000487721 ABCA6Q8N139 1617 aa18.85■□□□□ 0.61
SFXN3-206ENST00000487721 CCDC141Q6ZP82 1450 aa18.84■□□□□ 0.61
SFXN3-206ENST00000487721 RTEL1-TNFRSF6BF6WH68 1400 aa18.84■□□□□ 0.61
SFXN3-206ENST00000487721 SETD1BQ9UPS6 1966 aaKnown RBP18.84■□□□□ 0.61
SFXN3-206ENST00000487721 ATP7AQ04656 1500 aa18.81■□□□□ 0.6
SFXN3-206ENST00000487721 CNTLNQ9NXG0 1405 aa18.81■□□□□ 0.6
SFXN3-206ENST00000487721 KIDINS220Q9ULH0 1771 aa18.8■□□□□ 0.6
SFXN3-206ENST00000487721 ZMYM3Q14202 1370 aa18.79■□□□□ 0.6
SFXN3-206ENST00000487721 FGD6Q6ZV73 1430 aa18.78■□□□□ 0.6
SFXN3-206ENST00000487721 STRCQ7RTU9 1775 aa18.78■□□□□ 0.6
SFXN3-206ENST00000487721 A2MP01023 1474 aa18.77■□□□□ 0.6
SFXN3-206ENST00000487721 ARHGEF5Q12774 1597 aa18.77■□□□□ 0.6
SFXN3-206ENST00000487721 PTPRTO14522 1441 aa18.77■□□□□ 0.6
SFXN3-206ENST00000487721 C3P01024 1663 aa18.77■□□□□ 0.6
SFXN3-206ENST00000487721 FAM50AQ14320 339 aaKnown RBP18.76■□□□□ 0.59
SFXN3-206ENST00000487721 GGT6Q6P531 493 aa18.75■□□□□ 0.59
SFXN3-206ENST00000487721 DHX29Q7Z478 1369 aaKnown RBP18.75■□□□□ 0.59
SFXN3-206ENST00000487721 INO80Q9ULG1 1556 aaPredicted RBP18.75■□□□□ 0.59
SFXN3-206ENST00000487721 PHF23Q9BUL5 403 aaPredicted RBP18.74■□□□□ 0.59
SFXN3-206ENST00000487721 PPARGC1BQ86YN6 1023 aaKnown RBP18.73■□□□□ 0.59
SFXN3-206ENST00000487721 PPP6R1Q9UPN7 881 aa18.73■□□□□ 0.59
SFXN3-206ENST00000487721 NPATQ14207 1427 aa18.72■□□□□ 0.59
SFXN3-206ENST00000487721 TCOF1Q13428 1488 aaKnown RBP18.71■□□□□ 0.59
SFXN3-206ENST00000487721 PTPN23Q9H3S7 1636 aa18.71■□□□□ 0.58
SFXN3-206ENST00000487721 KIF3BO15066 747 aa18.7■□□□□ 0.58
SFXN3-206ENST00000487721 NCOA1Q15788 1441 aa18.69■□□□□ 0.58
SFXN3-206ENST00000487721 NCKAP5LQ9HCH0 1330 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms