RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 WDR7Q9Y4E6 1490 aa9.13□□□□□ -0.95
VAMP3-203ENST00000487194 DAPK1P53355 1430 aa9.13□□□□□ -0.95
VAMP3-203ENST00000487194 PTPRKQ15262 1439 aa9.13□□□□□ -0.95
VAMP3-203ENST00000487194 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.12□□□□□ -0.95
VAMP3-203ENST00000487194 KCNH8Q96L42 1107 aa9.12□□□□□ -0.95
VAMP3-203ENST00000487194 DNMT1P26358 1616 aaKnown RBP9.12□□□□□ -0.95
VAMP3-203ENST00000487194 PREX2Q70Z35 1606 aa9.12□□□□□ -0.95
VAMP3-203ENST00000487194 ROCK1Q13464 1354 aa9.12□□□□□ -0.95
VAMP3-203ENST00000487194 ZNF644Q9H582 1327 aaPredicted RBP9.11□□□□□ -0.95
VAMP3-203ENST00000487194 RSPH4AQ5TD94 716 aa9.11□□□□□ -0.95
VAMP3-203ENST00000487194 ZNF777Q9ULD5 760 aaPredicted RBP9.11□□□□□ -0.95
VAMP3-203ENST00000487194 ABCC5O15440 1437 aa9.11□□□□□ -0.95
VAMP3-203ENST00000487194 PLEKHH2Q8IVE3 1493 aa9.1□□□□□ -0.95
VAMP3-203ENST00000487194 ASXL2Q76L83 1435 aa9.1□□□□□ -0.95
VAMP3-203ENST00000487194 TTC37Q6PGP7 1564 aa9.1□□□□□ -0.95
VAMP3-203ENST00000487194 MYO5CQ9NQX4 1742 aa9.1□□□□□ -0.95
VAMP3-203ENST00000487194 DHX57Q6P158 1386 aaKnown RBP9.1□□□□□ -0.95
VAMP3-203ENST00000487194 ARAP3Q8WWN8 1544 aa9.1□□□□□ -0.95
VAMP3-203ENST00000487194 PLCH2O75038 1416 aa9.09□□□□□ -0.95
VAMP3-203ENST00000487194 NAIPQ13075 1403 aa9.09□□□□□ -0.95
VAMP3-203ENST00000487194 EFCAB2Q5VUJ9 269 aa9.09□□□□□ -0.95
VAMP3-203ENST00000487194 ARHGAP5Q13017 1502 aa9.09□□□□□ -0.95
VAMP3-203ENST00000487194 RIMBP3CA6NJZ7 1639 aa9.09□□□□□ -0.95
VAMP3-203ENST00000487194 RIMBP3BA6NNM3 1639 aa9.09□□□□□ -0.95
VAMP3-203ENST00000487194 RIMBP3Q9UFD9 1639 aa9.09□□□□□ -0.95
VAMP3-203ENST00000487194 CDC42BPBQ9Y5S2 1711 aa9.08□□□□□ -0.96
VAMP3-203ENST00000487194 ARHGEF5Q12774 1597 aa9.08□□□□□ -0.96
VAMP3-203ENST00000487194 KIAA1107Q9UPP5 1409 aa9.08□□□□□ -0.96
VAMP3-203ENST00000487194 CHIC2Q9UKJ5 165 aa9.08□□□□□ -0.96
VAMP3-203ENST00000487194 SHANK2Q9UPX8 1470 aa9.08□□□□□ -0.96
VAMP3-203ENST00000487194 GCC2Q8IWJ2 1684 aa9.07□□□□□ -0.96
VAMP3-203ENST00000487194 ABCA9Q8IUA7 1624 aa9.07□□□□□ -0.96
VAMP3-203ENST00000487194 TSPY4P0CV99 314 aa9.07□□□□□ -0.96
VAMP3-203ENST00000487194 TSPY10P0CW01 314 aa9.07□□□□□ -0.96
VAMP3-203ENST00000487194 ANKRD30AQ9BXX3 1397 aa9.07□□□□□ -0.96
VAMP3-203ENST00000487194 ADGRL2O95490 1459 aa9.07□□□□□ -0.96
VAMP3-203ENST00000487194 SAMD9LQ8IVG5 1584 aa9.07□□□□□ -0.96
VAMP3-203ENST00000487194 CYB5RLQ6IPT4 315 aa9.06□□□□□ -0.96
VAMP3-203ENST00000487194 RRP7BPQ9NSQ0 103 aa9.06□□□□□ -0.96
VAMP3-203ENST00000487194 CCDC141Q6ZP82 1450 aa9.06□□□□□ -0.96
VAMP3-203ENST00000487194 MBD5Q9P267 1494 aa9.06□□□□□ -0.96
VAMP3-203ENST00000487194 CROCC2H7BZ55 1655 aa9.06□□□□□ -0.96
VAMP3-203ENST00000487194 ADGBQ8N7X0 1667 aa9.06□□□□□ -0.96
VAMP3-203ENST00000487194 MAPKBP1O60336 1514 aa9.05□□□□□ -0.96
VAMP3-203ENST00000487194 NCOA1Q15788 1441 aa9.05□□□□□ -0.96
VAMP3-203ENST00000487194 C9orf84Q5VXU9 1444 aa9.05□□□□□ -0.96
VAMP3-203ENST00000487194 HNRNPMP52272 730 aaKnown RBP eCLIP9.04□□□□□ -0.96
VAMP3-203ENST00000487194 SYCP2Q9BX26 1530 aa9.03□□□□□ -0.96
VAMP3-203ENST00000487194 MAST1Q9Y2H9 1570 aa9.03□□□□□ -0.96
VAMP3-203ENST00000487194 ABCC1P33527 1531 aa9.02□□□□□ -0.97
VAMP3-203ENST00000487194 FANCAO15360 1455 aa9.02□□□□□ -0.97
VAMP3-203ENST00000487194 CD109Q6YHK3 1445 aa9.01□□□□□ -0.97
VAMP3-203ENST00000487194 CFAP74Q9C0B2 1584 aa9□□□□□ -0.97
VAMP3-203ENST00000487194 TRIM52Q96A61 297 aa9□□□□□ -0.97
VAMP3-203ENST00000487194 KIF15Q9NS87 1388 aa8.99□□□□□ -0.97
VAMP3-203ENST00000487194 ANKRD50Q9ULJ7 1429 aa8.99□□□□□ -0.97
VAMP3-203ENST00000487194 ARHGEF12Q9NZN5 1544 aa8.99□□□□□ -0.97
VAMP3-203ENST00000487194 GLI2P10070 1586 aa8.99□□□□□ -0.97
VAMP3-203ENST00000487194 RTEL1-TNFRSF6BF6WH68 1400 aa8.98□□□□□ -0.97
VAMP3-203ENST00000487194 ADGRL1O94910 1474 aa8.98□□□□□ -0.97
VAMP3-203ENST00000487194 TIMELESSQ9UNS1 1208 aa8.98□□□□□ -0.97
VAMP3-203ENST00000487194 PLXNC1O60486 1568 aa8.98□□□□□ -0.97
VAMP3-203ENST00000487194 KDM6BO15054 1643 aa8.98□□□□□ -0.97
VAMP3-203ENST00000487194 SPAG9O60271 1321 aaKnown RBP8.97□□□□□ -0.97
VAMP3-203ENST00000487194 SCAPERQ9BY12 1400 aa8.97□□□□□ -0.97
VAMP3-203ENST00000487194 TRAPPC8Q9Y2L5 1435 aa8.97□□□□□ -0.97
VAMP3-203ENST00000487194 NEO1Q92859 1461 aa8.96□□□□□ -0.97
VAMP3-203ENST00000487194 MPHOSPH9Q99550 1183 aa8.96□□□□□ -0.98
VAMP3-203ENST00000487194 DUOX2Q9NRD8 1548 aa8.95□□□□□ -0.98
VAMP3-203ENST00000487194 ERBINQ96RT1 1412 aa8.95□□□□□ -0.98
VAMP3-203ENST00000487194 ZNF518AQ6AHZ1 1483 aa8.95□□□□□ -0.98
VAMP3-203ENST00000487194 MAP3K4Q9Y6R4 1608 aa8.94□□□□□ -0.98
VAMP3-203ENST00000487194 SLC4A1APQ9BWU0 796 aaKnown RBP8.94□□□□□ -0.98
VAMP3-203ENST00000487194 DIP2BQ9P265 1576 aa8.94□□□□□ -0.98
VAMP3-203ENST00000487194 FAM69CQ0P6D2 419 aa8.93□□□□□ -0.98
VAMP3-203ENST00000487194 AFAP1Q8N556 730 aa8.93□□□□□ -0.98
VAMP3-203ENST00000487194 ZFYVE16Q7Z3T8 1539 aa8.93□□□□□ -0.98
VAMP3-203ENST00000487194 KDM5DQ9BY66 1539 aa8.93□□□□□ -0.98
VAMP3-203ENST00000487194 ATP7AQ04656 1500 aa8.92□□□□□ -0.98
VAMP3-203ENST00000487194 POGZQ7Z3K3 1410 aa8.92□□□□□ -0.98
VAMP3-203ENST00000487194 NUP155O75694 1391 aa8.92□□□□□ -0.98
VAMP3-203ENST00000487194 INO80Q9ULG1 1556 aaPredicted RBP8.91□□□□□ -0.98
VAMP3-203ENST00000487194 PZPP20742 1482 aa8.91□□□□□ -0.98
VAMP3-203ENST00000487194 TEX14Q8IWB6 1497 aa8.91□□□□□ -0.98
VAMP3-203ENST00000487194 NEUROD1Q13562 356 aa8.91□□□□□ -0.98
VAMP3-203ENST00000487194 SIN3AQ96ST3 1273 aa8.91□□□□□ -0.98
VAMP3-203ENST00000487194 MYT1LQ9UL68 1186 aa8.91□□□□□ -0.98
VAMP3-203ENST00000487194 DENND4BO75064 1496 aaPredicted RBP8.9□□□□□ -0.98
VAMP3-203ENST00000487194 MLH3Q9UHC1 1453 aa8.9□□□□□ -0.98
VAMP3-203ENST00000487194 UNC13BO14795 1591 aa8.9□□□□□ -0.99
VAMP3-203ENST00000487194 KDM5CP41229 1560 aa8.9□□□□□ -0.99
VAMP3-203ENST00000487194 DHX29Q7Z478 1369 aaKnown RBP8.89□□□□□ -0.99
VAMP3-203ENST00000487194 TONSLQ96HA7 1378 aa8.89□□□□□ -0.99
VAMP3-203ENST00000487194 ANKRD30BQ9BXX2 1392 aa8.89□□□□□ -0.99
VAMP3-203ENST00000487194 PKD2Q13563 968 aa8.88□□□□□ -0.99
VAMP3-203ENST00000487194 MAGI2Q86UL8 1455 aa8.88□□□□□ -0.99
VAMP3-203ENST00000487194 EIF2AK4Q9P2K8 1649 aaKnown RBP8.87□□□□□ -0.99
VAMP3-203ENST00000487194 HECW2Q9P2P5 1572 aa8.87□□□□□ -0.99
VAMP3-203ENST00000487194 FAM135AQ9P2D6 1515 aa8.87□□□□□ -0.99
VAMP3-203ENST00000487194 IQGAP3Q86VI3 1631 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms