RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 CC2D1BQ5T0F9 858 aaKnown RBP9.98□□□□□ -0.81
COL6A4P1-202ENST00000487147 AKNAQ7Z591 1439 aa9.98□□□□□ -0.81
COL6A4P1-202ENST00000487147 MS4A1P11836 297 aa9.98□□□□□ -0.81
COL6A4P1-202ENST00000487147 TOP2BQ02880 1626 aa9.97□□□□□ -0.81
COL6A4P1-202ENST00000487147 TIAM1Q13009 1591 aa9.97□□□□□ -0.81
COL6A4P1-202ENST00000487147 CFDP1Q9UEE9 299 aaPredicted RBP9.97□□□□□ -0.81
COL6A4P1-202ENST00000487147 SLC4A3P48751 1232 aa9.97□□□□□ -0.81
COL6A4P1-202ENST00000487147 RGL3Q3MIN7 710 aa9.97□□□□□ -0.81
COL6A4P1-202ENST00000487147 ANP32BQ92688 251 aaKnown RBP9.97□□□□□ -0.81
COL6A4P1-202ENST00000487147 NAP1L5Q96NT1 182 aaPredicted RBP9.97□□□□□ -0.81
COL6A4P1-202ENST00000487147 HSP90AA1P07900 732 aaKnown RBP9.96□□□□□ -0.81
COL6A4P1-202ENST00000487147 PDE3BQ13370 1112 aa9.96□□□□□ -0.81
COL6A4P1-202ENST00000487147 FBLN2P98095 1184 aa9.96□□□□□ -0.82
COL6A4P1-202ENST00000487147 DCAF11Q8TEB1 546 aa9.95□□□□□ -0.82
COL6A4P1-202ENST00000487147 PKD2Q13563 968 aa9.95□□□□□ -0.82
COL6A4P1-202ENST00000487147 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.95□□□□□ -0.82
COL6A4P1-202ENST00000487147 KTN1Q86UP2 1357 aaKnown RBP9.94□□□□□ -0.82
COL6A4P1-202ENST00000487147 NLRP13Q86W25 1043 aa9.94□□□□□ -0.82
COL6A4P1-202ENST00000487147 PLIN1O60240 522 aa9.94□□□□□ -0.82
COL6A4P1-202ENST00000487147 L1TD1Q5T7N2 865 aaKnown RBP9.94□□□□□ -0.82
COL6A4P1-202ENST00000487147 ROCK2O75116 1388 aaKnown RBP9.94□□□□□ -0.82
COL6A4P1-202ENST00000487147 TRIM44Q96DX7 344 aaPredicted RBP9.93□□□□□ -0.82
COL6A4P1-202ENST00000487147 KNSTRNQ9Y448 316 aa9.93□□□□□ -0.82
COL6A4P1-202ENST00000487147 MYBBP1AQ9BQG0 1328 aaKnown RBP9.93□□□□□ -0.82
COL6A4P1-202ENST00000487147 KIF15Q9NS87 1388 aa9.93□□□□□ -0.82
COL6A4P1-202ENST00000487147 SMG6Q86US8 1419 aaKnown RBP9.93□□□□□ -0.82
COL6A4P1-202ENST00000487147 NFKBIBQ15653 356 aa9.92□□□□□ -0.82
COL6A4P1-202ENST00000487147 BRPF3Q9ULD4 1205 aa9.92□□□□□ -0.82
COL6A4P1-202ENST00000487147 HFM1A2PYH4 1435 aa9.92□□□□□ -0.82
COL6A4P1-202ENST00000487147 USP47Q96K76 1375 aa9.91□□□□□ -0.82
COL6A4P1-202ENST00000487147 RSPH6AQ9H0K4 717 aa9.91□□□□□ -0.82
COL6A4P1-202ENST00000487147 SLKQ9H2G2 1235 aaPredicted RBP9.91□□□□□ -0.82
COL6A4P1-202ENST00000487147 MYOM3Q5VTT5 1437 aa9.91□□□□□ -0.82
COL6A4P1-202ENST00000487147 CRBNQ96SW2 442 aa9.91□□□□□ -0.82
COL6A4P1-202ENST00000487147 BACH2Q9BYV9 841 aa9.9□□□□□ -0.82
COL6A4P1-202ENST00000487147 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.9□□□□□ -0.82
COL6A4P1-202ENST00000487147 CASKIN1Q8WXD9 1431 aa9.9□□□□□ -0.83
COL6A4P1-202ENST00000487147 FAM161AQ3B820 660 aa9.9□□□□□ -0.83
COL6A4P1-202ENST00000487147 ST20-MTHFSA0A0A6YYL1 179 aa9.89□□□□□ -0.83
COL6A4P1-202ENST00000487147 C11orf95C9JLR9 678 aaPredicted RBP9.89□□□□□ -0.83
COL6A4P1-202ENST00000487147 NBPF8Q3BBV2 869 aa9.88□□□□□ -0.83
COL6A4P1-202ENST00000487147 A0A0U1RQG5 324 aaPredicted RBP9.88□□□□□ -0.83
COL6A4P1-202ENST00000487147 CENPQQ7L2Z9 268 aaPredicted RBP9.88□□□□□ -0.83
COL6A4P1-202ENST00000487147 FRAT1Q92837 279 aaPredicted RBP9.88□□□□□ -0.83
COL6A4P1-202ENST00000487147 MAP3K1Q13233 1512 aa9.88□□□□□ -0.83
COL6A4P1-202ENST00000487147 PNNQ9H307 717 aaKnown RBP9.88□□□□□ -0.83
COL6A4P1-202ENST00000487147 FYCO1Q9BQS8 1478 aa9.87□□□□□ -0.83
COL6A4P1-202ENST00000487147 PNISRQ8TF01 805 aaKnown RBP9.87□□□□□ -0.83
COL6A4P1-202ENST00000487147 TMF1P82094 1093 aa9.87□□□□□ -0.83
COL6A4P1-202ENST00000487147 CUX1P39880 1505 aa9.87□□□□□ -0.83
COL6A4P1-202ENST00000487147 CADPSQ9ULU8 1353 aa9.87□□□□□ -0.83
COL6A4P1-202ENST00000487147 NAIPQ13075 1403 aa9.86□□□□□ -0.83
COL6A4P1-202ENST00000487147 NCOA2Q15596 1464 aa9.86□□□□□ -0.83
COL6A4P1-202ENST00000487147 SPRYD3Q8NCJ5 442 aa9.86□□□□□ -0.83
COL6A4P1-202ENST00000487147 GZF1Q9H116 711 aaPredicted RBP9.86□□□□□ -0.83
COL6A4P1-202ENST00000487147 FGD5Q6ZNL6 1462 aa9.85□□□□□ -0.83
COL6A4P1-202ENST00000487147 CDCA8Q53HL2 280 aa9.85□□□□□ -0.83
COL6A4P1-202ENST00000487147 TDRD9Q8NDG6 1382 aaKnown RBP9.85□□□□□ -0.83
COL6A4P1-202ENST00000487147 PLEKHD1A6NEE1 506 aa9.85□□□□□ -0.83
COL6A4P1-202ENST00000487147 ARID4BQ4LE39 1312 aaPredicted RBP9.85□□□□□ -0.83
COL6A4P1-202ENST00000487147 NEUROD2Q15784 382 aa9.85□□□□□ -0.83
COL6A4P1-202ENST00000487147 GOLGA2Q08379 1002 aa9.84□□□□□ -0.83
COL6A4P1-202ENST00000487147 NUP155O75694 1391 aa9.84□□□□□ -0.83
COL6A4P1-202ENST00000487147 CDCA7LQ96GN5 454 aa9.83□□□□□ -0.84
COL6A4P1-202ENST00000487147 GOLGA6L3A6NEY3 463 aa9.83□□□□□ -0.84
COL6A4P1-202ENST00000487147 BRD4O60885 1362 aaPredicted RBP9.83□□□□□ -0.84
COL6A4P1-202ENST00000487147 VSIG10Q8N0Z9 540 aa9.83□□□□□ -0.84
COL6A4P1-202ENST00000487147 FRAT2O75474 233 aaPredicted RBP9.82□□□□□ -0.84
COL6A4P1-202ENST00000487147 NCOA1Q15788 1441 aa9.82□□□□□ -0.84
COL6A4P1-202ENST00000487147 GOLGA6L22H0YM25 854 aa9.82□□□□□ -0.84
COL6A4P1-202ENST00000487147 CFTRP13569 1480 aa9.81□□□□□ -0.84
COL6A4P1-202ENST00000487147 ANKRD30AQ9BXX3 1397 aa9.81□□□□□ -0.84
COL6A4P1-202ENST00000487147 PDE4CQ08493 712 aa9.8□□□□□ -0.84
COL6A4P1-202ENST00000487147 FTSJ3Q8IY81 847 aaKnown RBP9.8□□□□□ -0.84
COL6A4P1-202ENST00000487147 PCF11O94913 1555 aaKnown RBP9.8□□□□□ -0.84
COL6A4P1-202ENST00000487147 HSCBQ8IWL3 235 aa9.8□□□□□ -0.84
COL6A4P1-202ENST00000487147 PANK3Q9H999 370 aa9.79□□□□□ -0.84
COL6A4P1-202ENST00000487147 HSP90AA2PQ14568 343 aaPredicted RBP9.79□□□□□ -0.84
COL6A4P1-202ENST00000487147 FAM43AQ8N2R8 423 aa9.78□□□□□ -0.84
COL6A4P1-202ENST00000487147 EFCAB5A4FU69 1503 aa9.78□□□□□ -0.84
COL6A4P1-202ENST00000487147 ZNF644Q9H582 1327 aaPredicted RBP9.78□□□□□ -0.84
COL6A4P1-202ENST00000487147 HSP90AB1P08238 724 aaKnown RBP9.77□□□□□ -0.85
COL6A4P1-202ENST00000487147 NCLP19338 710 aaKnown RBP9.77□□□□□ -0.85
COL6A4P1-202ENST00000487147 NCAPD3P42695 1498 aa9.77□□□□□ -0.85
COL6A4P1-202ENST00000487147 CHMP7Q8WUX9 453 aaPredicted RBP9.77□□□□□ -0.85
COL6A4P1-202ENST00000487147 PEG3Q9GZU2 1588 aa9.77□□□□□ -0.85
COL6A4P1-202ENST00000487147 BIVM-ERCC5R4GMW8 1640 aa9.77□□□□□ -0.85
COL6A4P1-202ENST00000487147 RAD54L2Q9Y4B4 1467 aa9.77□□□□□ -0.85
COL6A4P1-202ENST00000487147 SKAP1Q86WV1 359 aa9.77□□□□□ -0.85
COL6A4P1-202ENST00000487147 CCDC146Q8IYE0 955 aa9.77□□□□□ -0.85
COL6A4P1-202ENST00000487147 MYH16Q9H6N6 1097 aa9.77□□□□□ -0.85
COL6A4P1-202ENST00000487147 CHGAP10645 457 aaKnown RBP9.77□□□□□ -0.85
COL6A4P1-202ENST00000487147 MAPK8IP3Q9UPT6 1336 aa9.76□□□□□ -0.85
COL6A4P1-202ENST00000487147 PTPN23Q9H3S7 1636 aa9.76□□□□□ -0.85
COL6A4P1-202ENST00000487147 PLPPR3Q6T4P5 718 aa9.76□□□□□ -0.85
COL6A4P1-202ENST00000487147 PMFBP1Q8TBY8 1022 aa9.75□□□□□ -0.85
COL6A4P1-202ENST00000487147 TNNT2P45379 298 aaPredicted RBP9.75□□□□□ -0.85
COL6A4P1-202ENST00000487147 PTPRKQ15262 1439 aa9.75□□□□□ -0.85
COL6A4P1-202ENST00000487147 CFAP53Q96M91 514 aa9.75□□□□□ -0.85
COL6A4P1-202ENST00000487147 RWDD1Q9H446 243 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 1227.1 ms