RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 IFFO2Q5TF58 517 aa8.85□□□□□ -0.99
SF1-217ENST00000486960 JPH4Q96JJ6 628 aa8.85□□□□□ -0.99
SF1-217ENST00000486960 YEATS2Q9ULM3 1422 aa8.85□□□□□ -0.99
SF1-217ENST00000486960 CFAP43Q8NDM7 1665 aa8.85□□□□□ -0.99
SF1-217ENST00000486960 CUX1P39880 1505 aa8.84□□□□□ -0.99
SF1-217ENST00000486960 CCDC88BA6NC98 1476 aa8.83□□□□□ -1
SF1-217ENST00000486960 PTPRTO14522 1441 aa8.82□□□□□ -1
SF1-217ENST00000486960 UBAP1LF5GYI3 381 aa8.82□□□□□ -1
SF1-217ENST00000486960 NBR1Q14596 966 aa8.82□□□□□ -1
SF1-217ENST00000486960 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.79□□□□□ -1
SF1-217ENST00000486960 FER1L4A9Z1Z3 1794 aa8.77□□□□□ -1.01
SF1-217ENST00000486960 ABCA10Q8WWZ4 1543 aa8.77□□□□□ -1.01
SF1-217ENST00000486960 TTC37Q6PGP7 1564 aa8.76□□□□□ -1.01
SF1-217ENST00000486960 ZCCHC11Q5TAX3 1644 aaKnown RBP8.76□□□□□ -1.01
SF1-217ENST00000486960 FRMPD1Q5SYB0 1578 aa8.75□□□□□ -1.01
SF1-217ENST00000486960 UBTFP17480 764 aaKnown RBP8.75□□□□□ -1.01
SF1-217ENST00000486960 POTEAQ6S8J7 498 aa8.75□□□□□ -1.01
SF1-217ENST00000486960 ALKQ9UM73 1620 aa8.75□□□□□ -1.01
SF1-217ENST00000486960 MAGI3Q5TCQ9 1506 aa8.75□□□□□ -1.01
SF1-217ENST00000486960 FHAD1B1AJZ9 1412 aa8.73□□□□□ -1.01
SF1-217ENST00000486960 HRCP23327 699 aa8.73□□□□□ -1.01
SF1-217ENST00000486960 ARAP3Q8WWN8 1544 aa8.72□□□□□ -1.01
SF1-217ENST00000486960 PAXIP1Q6ZW49 1069 aaPredicted RBP8.7□□□□□ -1.02
SF1-217ENST00000486960 UPF1Q92900 1129 aaKnown RBP eCLIP8.7□□□□□ -1.022e-19■□□□□ 9
SF1-217ENST00000486960 BBXQ8WY36 941 aaPredicted RBP8.69□□□□□ -1.02
SF1-217ENST00000486960 ZNF335Q9H4Z2 1342 aaPredicted RBP8.69□□□□□ -1.02
SF1-217ENST00000486960 SLC4A2P04920 1241 aa8.68□□□□□ -1.02
SF1-217ENST00000486960 PIP4K2BP78356 416 aa8.68□□□□□ -1.02
SF1-217ENST00000486960 UHRF1BP1LA0JNW5 1464 aa8.68□□□□□ -1.02
SF1-217ENST00000486960 ARHGEF40Q8TER5 1519 aa8.68□□□□□ -1.02
SF1-217ENST00000486960 KDM5BQ9UGL1 1544 aa8.68□□□□□ -1.02
SF1-217ENST00000486960 ARID4BQ4LE39 1312 aaPredicted RBP8.67□□□□□ -1.02
SF1-217ENST00000486960 CD109Q6YHK3 1445 aa8.67□□□□□ -1.02
SF1-217ENST00000486960 CFAP44Q96MT7 982 aa8.67□□□□□ -1.02
SF1-217ENST00000486960 RNF39Q9H2S5 420 aa8.67□□□□□ -1.02
SF1-217ENST00000486960 SETD1BQ9UPS6 1966 aaKnown RBP8.66□□□□□ -1.02
SF1-217ENST00000486960 PTPRGP23470 1445 aa8.66□□□□□ -1.02
SF1-217ENST00000486960 HMGB1P09429 215 aaKnown RBP8.64□□□□□ -1.03
SF1-217ENST00000486960 SETBP1Q9Y6X0 1596 aa8.64□□□□□ -1.03
SF1-217ENST00000486960 WDR7Q9Y4E6 1490 aa8.64□□□□□ -1.03
SF1-217ENST00000486960 NCOA1Q15788 1441 aa8.63□□□□□ -1.03
SF1-217ENST00000486960 RAPGEF3O95398 923 aa8.62□□□□□ -1.03
SF1-217ENST00000486960 CEBPAP49715 358 aaPredicted RBP8.62□□□□□ -1.03
SF1-217ENST00000486960 CACNB1Q02641 598 aaPredicted RBP8.62□□□□□ -1.03
SF1-217ENST00000486960 C1QBPQ07021 282 aaKnown RBP8.62□□□□□ -1.03
SF1-217ENST00000486960 CCDC9Q9Y3X0 531 aaKnown RBP8.62□□□□□ -1.03
SF1-217ENST00000486960 KIAA0556O60303 1618 aa8.62□□□□□ -1.03
SF1-217ENST00000486960 ERICH3Q5RHP9 1530 aa8.61□□□□□ -1.03
SF1-217ENST00000486960 LOC105371045A0A1W2PR82 267 aa8.61□□□□□ -1.03
SF1-217ENST00000486960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.6□□□□□ -1.03
SF1-217ENST00000486960 HNRNPUL2Q1KMD3 747 aaKnown RBP8.6□□□□□ -1.03
SF1-217ENST00000486960 U3KPZ7 1027 aaPredicted RBP8.6□□□□□ -1.03
SF1-217ENST00000486960 UHRF1BP1Q6BDS2 1440 aa8.6□□□□□ -1.03
SF1-217ENST00000486960 CEP350Q5VT06 3117 aa8.6□□□□□ -1.03
SF1-217ENST00000486960 RICTORQ6R327 1708 aa8.6□□□□□ -1.03
SF1-217ENST00000486960 UACAQ9BZF9 1416 aa8.59□□□□□ -1.03
SF1-217ENST00000486960 CDK11AQ9UQ88 783 aaPredicted RBP8.58□□□□□ -1.04
SF1-217ENST00000486960 ARHGEF12Q9NZN5 1544 aa8.58□□□□□ -1.04
SF1-217ENST00000486960 MYCNP04198 464 aaPredicted RBP8.57□□□□□ -1.04
SF1-217ENST00000486960 CDK11BP21127 795 aaKnown RBP8.57□□□□□ -1.04
SF1-217ENST00000486960 TSHZ2Q9NRE2 1034 aa8.57□□□□□ -1.04
SF1-217ENST00000486960 C3P01024 1663 aa8.56□□□□□ -1.04
SF1-217ENST00000486960 CAMSAP1Q5T5Y3 1602 aa8.55□□□□□ -1.04
SF1-217ENST00000486960 TNIKQ9UKE5 1360 aa8.55□□□□□ -1.04
SF1-217ENST00000486960 FANCAO15360 1455 aa8.55□□□□□ -1.04
SF1-217ENST00000486960 MLECQ14165 292 aa8.54□□□□□ -1.04
SF1-217ENST00000486960 ZBTB7CA1YPR0 619 aa8.53□□□□□ -1.04
SF1-217ENST00000486960 SAMD1Q6SPF0 538 aaPredicted RBP8.53□□□□□ -1.04
SF1-217ENST00000486960 SPRYD3Q8NCJ5 442 aa8.53□□□□□ -1.04
SF1-217ENST00000486960 PLEKHG5O94827 1062 aa8.51□□□□□ -1.05
SF1-217ENST00000486960 ATXN8OSP0DMR3 200 aa8.51□□□□□ -1.05
SF1-217ENST00000486960 EP400Q96L91 3159 aa8.51□□□□□ -1.05
SF1-217ENST00000486960 NCKAP5LQ9HCH0 1330 aa8.5□□□□□ -1.05
SF1-217ENST00000486960 POGZQ7Z3K3 1410 aa8.49□□□□□ -1.05
SF1-217ENST00000486960 TOM1O60784 492 aa8.49□□□□□ -1.05
SF1-217ENST00000486960 HSP90B1P14625 803 aaKnown RBP8.49□□□□□ -1.05
SF1-217ENST00000486960 PKD2Q13563 968 aa8.49□□□□□ -1.05
SF1-217ENST00000486960 KCNH8Q96L42 1107 aa8.49□□□□□ -1.05
SF1-217ENST00000486960 ABCA9Q8IUA7 1624 aa8.48□□□□□ -1.05
SF1-217ENST00000486960 CAPN15O75808 1086 aa8.48□□□□□ -1.05
SF1-217ENST00000486960 RBM33Q96EV2 1170 aaKnown RBP8.48□□□□□ -1.05
SF1-217ENST00000486960 SUPT6HQ7KZ85 1726 aaKnown RBP8.47□□□□□ -1.05
SF1-217ENST00000486960 DISP1Q96F81 1524 aa8.47□□□□□ -1.05
SF1-217ENST00000486960 LRRC7Q96NW7 1537 aa8.47□□□□□ -1.05
SF1-217ENST00000486960 LRP5O75197 1615 aa8.47□□□□□ -1.05
SF1-217ENST00000486960 STRCP1A6NGW2 1772 aa8.46□□□□□ -1.05
SF1-217ENST00000486960 ZMYM4Q5VZL5 1548 aa8.46□□□□□ -1.05
SF1-217ENST00000486960 ZFYVE16Q7Z3T8 1539 aa8.45□□□□□ -1.06
SF1-217ENST00000486960 TRIM52Q96A61 297 aa8.44□□□□□ -1.06
SF1-217ENST00000486960 AKNAQ7Z591 1439 aa8.44□□□□□ -1.06
SF1-217ENST00000486960 NEO1Q92859 1461 aa8.44□□□□□ -1.06
SF1-217ENST00000486960 CPS1P31327 1500 aa8.44□□□□□ -1.06
SF1-217ENST00000486960 RAPGEF6Q8TEU7 1601 aa8.43□□□□□ -1.06
SF1-217ENST00000486960 TCOF1Q13428 1488 aaKnown RBP8.43□□□□□ -1.06
SF1-217ENST00000486960 ZNF142P52746 1687 aaPredicted RBP8.42□□□□□ -1.06
SF1-217ENST00000486960 WRNQ14191 1432 aaPredicted RBP eCLIP8.41□□□□□ -1.06
SF1-217ENST00000486960 PTPRKQ15262 1439 aa8.41□□□□□ -1.06
SF1-217ENST00000486960 CARMIL2Q6F5E8 1435 aa8.41□□□□□ -1.06
SF1-217ENST00000486960 PHLDB1Q86UU1 1377 aa8.41□□□□□ -1.06
SF1-217ENST00000486960 HECW1Q76N89 1606 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms