RNA–Protein interactions for RNA: ENST00000486694.1

NECTIN4-202, Transcript of nectin cell adhesion molecule 4, humanhuman

TSL 3

Gene NECTIN4, Length 864 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-202ENST00000486694 SCAPERQ9BY12 1400 aa24.19■■□□□ 1.46
NECTIN4-202ENST00000486694 CDK11AQ9UQ88 783 aaPredicted RBP24.19■■□□□ 1.46
NECTIN4-202ENST00000486694 HECW1Q76N89 1606 aa24.19■■□□□ 1.46
NECTIN4-202ENST00000486694 MLECQ14165 292 aa24.15■■□□□ 1.46
NECTIN4-202ENST00000486694 EFCAB2Q5VUJ9 269 aa24.15■■□□□ 1.46
NECTIN4-202ENST00000486694 ARHGAP35Q9NRY4 1499 aa24.14■■□□□ 1.46
NECTIN4-202ENST00000486694 HSPA2P54652 639 aa24.09■■□□□ 1.45
NECTIN4-202ENST00000486694 KIF14Q15058 1648 aa24.09■■□□□ 1.45
NECTIN4-202ENST00000486694 CLIP1P30622 1438 aa24.09■■□□□ 1.45
NECTIN4-202ENST00000486694 C9orf84Q5VXU9 1444 aa24.09■■□□□ 1.45
NECTIN4-202ENST00000486694 ATP10AO60312 1499 aa24.08■■□□□ 1.45
NECTIN4-202ENST00000486694 SIGLEC1Q9BZZ2 1709 aa24.08■■□□□ 1.45
NECTIN4-202ENST00000486694 MYO5CQ9NQX4 1742 aa24.08■■□□□ 1.45
NECTIN4-202ENST00000486694 TROQ12816 1431 aaPredicted RBP24.08■■□□□ 1.44
NECTIN4-202ENST00000486694 ARHGAP5Q13017 1502 aa24.05■■□□□ 1.44
NECTIN4-202ENST00000486694 CHIC1Q5VXU3 224 aa24.05■■□□□ 1.44
NECTIN4-202ENST00000486694 ZNF518AQ6AHZ1 1483 aa24.05■■□□□ 1.44
NECTIN4-202ENST00000486694 FER1L4A9Z1Z3 1794 aa24.04■■□□□ 1.44
NECTIN4-202ENST00000486694 MYT1LQ9UL68 1186 aa24.04■■□□□ 1.44
NECTIN4-202ENST00000486694 ARHGEF12Q9NZN5 1544 aa24.01■■□□□ 1.43
NECTIN4-202ENST00000486694 AFAP1Q8N556 730 aa23.98■■□□□ 1.43
NECTIN4-202ENST00000486694 KDM5CP41229 1560 aa23.96■■□□□ 1.43
NECTIN4-202ENST00000486694 CCDC18Q5T9S5 1454 aa23.94■■□□□ 1.42
NECTIN4-202ENST00000486694 CEBPAP49715 358 aaPredicted RBP23.92■■□□□ 1.42
NECTIN4-202ENST00000486694 CASKIN1Q8WXD9 1431 aa23.92■■□□□ 1.42
NECTIN4-202ENST00000486694 LRRIQ1Q96JM4 1722 aa23.9■■□□□ 1.42
NECTIN4-202ENST00000486694 DIP2CQ9Y2E4 1556 aa23.89■■□□□ 1.41
NECTIN4-202ENST00000486694 PREX1Q8TCU6 1659 aa23.89■■□□□ 1.41
NECTIN4-202ENST00000486694 MLH3Q9UHC1 1453 aa23.88■■□□□ 1.41
NECTIN4-202ENST00000486694 CERKQ8TCT0 537 aa23.88■■□□□ 1.41
NECTIN4-202ENST00000486694 UHRF1BP1Q6BDS2 1440 aa23.87■■□□□ 1.41
NECTIN4-202ENST00000486694 ESF1Q9H501 851 aaKnown RBP23.87■■□□□ 1.41
NECTIN4-202ENST00000486694 PREX2Q70Z35 1606 aa23.87■■□□□ 1.41
NECTIN4-202ENST00000486694 REREQ9P2R6 1566 aa23.86■■□□□ 1.41
NECTIN4-202ENST00000486694 ABCC1P33527 1531 aa23.86■■□□□ 1.41
NECTIN4-202ENST00000486694 CDC42BPBQ9Y5S2 1711 aa23.86■■□□□ 1.41
NECTIN4-202ENST00000486694 TRAPPC8Q9Y2L5 1435 aa23.85■■□□□ 1.41
NECTIN4-202ENST00000486694 ABCA6Q8N139 1617 aa23.84■■□□□ 1.41
NECTIN4-202ENST00000486694 DMRT2Q9Y5R5 561 aa23.82■■□□□ 1.4
NECTIN4-202ENST00000486694 FYCO1Q9BQS8 1478 aa23.81■■□□□ 1.4
NECTIN4-202ENST00000486694 AGLP35573 1532 aa23.8■■□□□ 1.4
NECTIN4-202ENST00000486694 ITSN2Q9NZM3 1697 aa23.79■■□□□ 1.4
NECTIN4-202ENST00000486694 ZNF777Q9ULD5 760 aaPredicted RBP23.78■■□□□ 1.4
NECTIN4-202ENST00000486694 CNTLNQ9NXG0 1405 aa23.75■■□□□ 1.39
NECTIN4-202ENST00000486694 CDC42BPAQ5VT25 1732 aa23.74■■□□□ 1.39
NECTIN4-202ENST00000486694 SETD1BQ9UPS6 1966 aaKnown RBP23.74■■□□□ 1.39
NECTIN4-202ENST00000486694 C3P01024 1663 aa23.72■■□□□ 1.39
NECTIN4-202ENST00000486694 KIDINS220Q9ULH0 1771 aa23.72■■□□□ 1.39
NECTIN4-202ENST00000486694 SAMD9LQ8IVG5 1584 aa23.71■■□□□ 1.39
NECTIN4-202ENST00000486694 SPAG9O60271 1321 aaKnown RBP23.71■■□□□ 1.39
NECTIN4-202ENST00000486694 SYCP2Q9BX26 1530 aa23.7■■□□□ 1.38
NECTIN4-202ENST00000486694 GPATCH8Q9UKJ3 1502 aaKnown RBP23.69■■□□□ 1.38
NECTIN4-202ENST00000486694 STRCQ7RTU9 1775 aa23.69■■□□□ 1.38
NECTIN4-202ENST00000486694 PTPRTO14522 1441 aa23.67■■□□□ 1.38
NECTIN4-202ENST00000486694 HNRNPMP52272 730 aaKnown RBP eCLIP23.67■■□□□ 1.38
NECTIN4-202ENST00000486694 CFDP1Q9UEE9 299 aaPredicted RBP23.67■■□□□ 1.38
NECTIN4-202ENST00000486694 PLEKHH2Q8IVE3 1493 aa23.66■■□□□ 1.38
NECTIN4-202ENST00000486694 CCNB3Q8WWL7 1395 aa23.65■■□□□ 1.38
NECTIN4-202ENST00000486694 MTUS2Q5JR59 1369 aa23.65■■□□□ 1.38
NECTIN4-202ENST00000486694 KIAA1107Q9UPP5 1409 aa23.64■■□□□ 1.37
NECTIN4-202ENST00000486694 NPATQ14207 1427 aa23.62■■□□□ 1.37
NECTIN4-202ENST00000486694 ATP7AQ04656 1500 aa23.62■■□□□ 1.37
NECTIN4-202ENST00000486694 NCOA1Q15788 1441 aa23.6■■□□□ 1.37
NECTIN4-202ENST00000486694 ZMYM3Q14202 1370 aa23.6■■□□□ 1.37
NECTIN4-202ENST00000486694 A2MP01023 1474 aa23.59■■□□□ 1.37
NECTIN4-202ENST00000486694 MROH2AA6NES4 1674 aa23.58■■□□□ 1.37
NECTIN4-202ENST00000486694 SUPT6HQ7KZ85 1726 aaKnown RBP23.57■■□□□ 1.36
NECTIN4-202ENST00000486694 INO80Q9ULG1 1556 aaPredicted RBP23.57■■□□□ 1.36
NECTIN4-202ENST00000486694 GGT6Q6P531 493 aa23.55■■□□□ 1.36
NECTIN4-202ENST00000486694 PLXNC1O60486 1568 aa23.54■■□□□ 1.36
NECTIN4-202ENST00000486694 CAMSAP1Q5T5Y3 1602 aa23.54■■□□□ 1.36
NECTIN4-202ENST00000486694 EHBP1L1Q8N3D4 1523 aa23.52■■□□□ 1.36
NECTIN4-202ENST00000486694 CLTCQ00610 1675 aaKnown RBP23.51■■□□□ 1.35
NECTIN4-202ENST00000486694 LTBP4Q8N2S1 1624 aa23.5■■□□□ 1.35
NECTIN4-202ENST00000486694 DISP3Q9P2K9 1392 aa23.5■■□□□ 1.35
NECTIN4-202ENST00000486694 TIAM1Q13009 1591 aa23.49■■□□□ 1.35
NECTIN4-202ENST00000486694 PPP6R1Q9UPN7 881 aa23.49■■□□□ 1.35
NECTIN4-202ENST00000486694 ZNF644Q9H582 1327 aaPredicted RBP23.48■■□□□ 1.35
NECTIN4-202ENST00000486694 NCKAP5LQ9HCH0 1330 aa23.48■■□□□ 1.35
NECTIN4-202ENST00000486694 IQSEC2Q5JU85 1478 aa23.48■■□□□ 1.35
NECTIN4-202ENST00000486694 PTPRKQ15262 1439 aa23.47■■□□□ 1.35
NECTIN4-202ENST00000486694 PKD2Q13563 968 aa23.46■■□□□ 1.35
NECTIN4-202ENST00000486694 CEP162Q5TB80 1403 aa23.46■■□□□ 1.35
NECTIN4-202ENST00000486694 ADGBQ8N7X0 1667 aa23.45■■□□□ 1.34
NECTIN4-202ENST00000486694 MYO3AQ8NEV4 1616 aa23.45■■□□□ 1.34
NECTIN4-202ENST00000486694 PLA2R1Q13018 1463 aa23.44■■□□□ 1.34
NECTIN4-202ENST00000486694 MBD5Q9P267 1494 aa23.44■■□□□ 1.34
NECTIN4-202ENST00000486694 RTEL1-TNFRSF6BF6WH68 1400 aa23.44■■□□□ 1.34
NECTIN4-202ENST00000486694 CEP170BQ9Y4F5 1589 aaPredicted RBP23.44■■□□□ 1.34
NECTIN4-202ENST00000486694 ZNF142P52746 1687 aaPredicted RBP23.43■■□□□ 1.34
NECTIN4-202ENST00000486694 DHX29Q7Z478 1369 aaKnown RBP23.41■■□□□ 1.34
NECTIN4-202ENST00000486694 ZNF335Q9H4Z2 1342 aaPredicted RBP23.4■■□□□ 1.34
NECTIN4-202ENST00000486694 TCOF1Q13428 1488 aaKnown RBP23.38■■□□□ 1.33
NECTIN4-202ENST00000486694 CCDC141Q6ZP82 1450 aa23.38■■□□□ 1.33
NECTIN4-202ENST00000486694 KIF3BO15066 747 aa23.36■■□□□ 1.33
NECTIN4-202ENST00000486694 A2ML1A8K2U0 1454 aa23.36■■□□□ 1.33
NECTIN4-202ENST00000486694 NCOA2Q15596 1464 aa23.36■■□□□ 1.33
NECTIN4-202ENST00000486694 RSPH4AQ5TD94 716 aa23.35■■□□□ 1.33
NECTIN4-202ENST00000486694 CAMSAP2Q08AD1 1489 aa23.35■■□□□ 1.33
NECTIN4-202ENST00000486694 SPATA31D1Q6ZQQ2 1576 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms