RNA–Protein interactions for RNA: ENST00000486556.1

TRADD-202, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2 BASIC

Gene TRADD, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-202ENST00000486556 ABCC5O15440 1437 aa31.92■■■□□ 2.7
TRADD-202ENST00000486556 ROCK1Q13464 1354 aa31.9■■■□□ 2.7
TRADD-202ENST00000486556 CHIC2Q9UKJ5 165 aa31.89■■■□□ 2.69
TRADD-202ENST00000486556 ZNF777Q9ULD5 760 aaPredicted RBP31.89■■■□□ 2.69
TRADD-202ENST00000486556 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.85■■■□□ 2.69
TRADD-202ENST00000486556 ACIN1Q9UKV3 1341 aaKnown RBP31.84■■■□□ 2.69
TRADD-202ENST00000486556 RRP7BPQ9NSQ0 103 aa31.83■■■□□ 2.69
TRADD-202ENST00000486556 PREX2Q70Z35 1606 aa31.81■■■□□ 2.68
TRADD-202ENST00000486556 KCNH8Q96L42 1107 aa31.81■■■□□ 2.68
TRADD-202ENST00000486556 DNAJC5Q9H3Z4 198 aa31.81■■■□□ 2.68
TRADD-202ENST00000486556 GCC2Q8IWJ2 1684 aa31.81■■■□□ 2.68
TRADD-202ENST00000486556 CDC42BPBQ9Y5S2 1711 aa31.77■■■□□ 2.68
TRADD-202ENST00000486556 TTC37Q6PGP7 1564 aa31.77■■■□□ 2.68
TRADD-202ENST00000486556 RSPH4AQ5TD94 716 aa31.77■■■□□ 2.68
TRADD-202ENST00000486556 WDR7Q9Y4E6 1490 aa31.74■■■□□ 2.67
TRADD-202ENST00000486556 NPM1P06748 294 aaKnown RBP eCLIP31.73■■■□□ 2.67
TRADD-202ENST00000486556 MAPKBP1O60336 1514 aa31.73■■■□□ 2.67
TRADD-202ENST00000486556 PLCH2O75038 1416 aa31.71■■■□□ 2.67
TRADD-202ENST00000486556 ADGRL2O95490 1459 aa31.71■■■□□ 2.67
TRADD-202ENST00000486556 MYO5CQ9NQX4 1742 aa31.71■■■□□ 2.67
TRADD-202ENST00000486556 ARHGEF5Q12774 1597 aa31.71■■■□□ 2.67
TRADD-202ENST00000486556 CROCC2H7BZ55 1655 aa31.7■■■□□ 2.67
TRADD-202ENST00000486556 SHANK2Q9UPX8 1470 aa31.7■■■□□ 2.66
TRADD-202ENST00000486556 NCOA1Q15788 1441 aa31.7■■■□□ 2.66
TRADD-202ENST00000486556 ARHGAP5Q13017 1502 aa31.69■■■□□ 2.66
TRADD-202ENST00000486556 TSPY4P0CV99 314 aa31.68■■■□□ 2.66
TRADD-202ENST00000486556 TSPY10P0CW01 314 aa31.68■■■□□ 2.66
TRADD-202ENST00000486556 MBD5Q9P267 1494 aa31.68■■■□□ 2.66
TRADD-202ENST00000486556 SAMD9LQ8IVG5 1584 aa31.68■■■□□ 2.66
TRADD-202ENST00000486556 PLEKHH2Q8IVE3 1493 aa31.67■■■□□ 2.66
TRADD-202ENST00000486556 ANKRD30AQ9BXX3 1397 aa31.67■■■□□ 2.66
TRADD-202ENST00000486556 ADGBQ8N7X0 1667 aa31.66■■■□□ 2.66
TRADD-202ENST00000486556 HNRNPMP52272 730 aaKnown RBP eCLIP31.65■■■□□ 2.66
TRADD-202ENST00000486556 KIAA1107Q9UPP5 1409 aa31.65■■■□□ 2.66
TRADD-202ENST00000486556 ASXL2Q76L83 1435 aa31.64■■■□□ 2.66
TRADD-202ENST00000486556 EFCAB2Q5VUJ9 269 aa31.64■■■□□ 2.66
TRADD-202ENST00000486556 ARAP3Q8WWN8 1544 aa31.62■■■□□ 2.65
TRADD-202ENST00000486556 C9orf84Q5VXU9 1444 aa31.6■■■□□ 2.65
TRADD-202ENST00000486556 CCDC141Q6ZP82 1450 aa31.6■■■□□ 2.65
TRADD-202ENST00000486556 KDM6BO15054 1643 aa31.58■■■□□ 2.65
TRADD-202ENST00000486556 TRIM52Q96A61 297 aa31.56■■■□□ 2.64
TRADD-202ENST00000486556 TIMELESSQ9UNS1 1208 aa31.55■■■□□ 2.64
TRADD-202ENST00000486556 ABCA9Q8IUA7 1624 aa31.55■■■□□ 2.64
TRADD-202ENST00000486556 SYCP2Q9BX26 1530 aa31.53■■■□□ 2.64
TRADD-202ENST00000486556 MPHOSPH9Q99550 1183 aa31.48■■■□□ 2.63
TRADD-202ENST00000486556 ANKRD50Q9ULJ7 1429 aa31.48■■■□□ 2.63
TRADD-202ENST00000486556 MAST1Q9Y2H9 1570 aa31.48■■■□□ 2.63
TRADD-202ENST00000486556 SIN3AQ96ST3 1273 aa31.46■■■□□ 2.63
TRADD-202ENST00000486556 RIMBP3CA6NJZ7 1639 aa31.46■■■□□ 2.63
TRADD-202ENST00000486556 RIMBP3BA6NNM3 1639 aa31.46■■■□□ 2.63
TRADD-202ENST00000486556 RIMBP3Q9UFD9 1639 aa31.46■■■□□ 2.63
TRADD-202ENST00000486556 ABCC1P33527 1531 aa31.44■■■□□ 2.62
TRADD-202ENST00000486556 CYB5RLQ6IPT4 315 aa31.44■■■□□ 2.62
TRADD-202ENST00000486556 ARHGEF12Q9NZN5 1544 aa31.43■■■□□ 2.62
TRADD-202ENST00000486556 KIF15Q9NS87 1388 aa31.43■■■□□ 2.62
TRADD-202ENST00000486556 NEUROD1Q13562 356 aa31.41■■■□□ 2.62
TRADD-202ENST00000486556 FANCAO15360 1455 aa31.4■■■□□ 2.62
TRADD-202ENST00000486556 DENND4BO75064 1496 aaPredicted RBP31.39■■■□□ 2.62
TRADD-202ENST00000486556 ZNF316A6NFI3 1004 aaPredicted RBP31.34■■■□□ 2.61
TRADD-202ENST00000486556 SLC4A1APQ9BWU0 796 aaKnown RBP31.34■■■□□ 2.61
TRADD-202ENST00000486556 PLXNC1O60486 1568 aa31.33■■■□□ 2.61
TRADD-202ENST00000486556 TRAPPC8Q9Y2L5 1435 aa31.32■■■□□ 2.6
TRADD-202ENST00000486556 CD109Q6YHK3 1445 aa31.31■■■□□ 2.6
TRADD-202ENST00000486556 RTEL1-TNFRSF6BF6WH68 1400 aa31.3■■■□□ 2.6
TRADD-202ENST00000486556 PZPP20742 1482 aa31.29■■■□□ 2.6
TRADD-202ENST00000486556 ADGRL1O94910 1474 aa31.26■■■□□ 2.59
TRADD-202ENST00000486556 SPAG9O60271 1321 aaKnown RBP31.25■■■□□ 2.59
TRADD-202ENST00000486556 TONSLQ96HA7 1378 aa31.25■■■□□ 2.59
TRADD-202ENST00000486556 DUOX2Q9NRD8 1548 aa31.25■■■□□ 2.59
TRADD-202ENST00000486556 KDM5DQ9BY66 1539 aa31.24■■■□□ 2.59
TRADD-202ENST00000486556 AFAP1Q8N556 730 aa31.24■■■□□ 2.59
TRADD-202ENST00000486556 SCAPERQ9BY12 1400 aa31.24■■■□□ 2.59
TRADD-202ENST00000486556 NUP155O75694 1391 aa31.24■■■□□ 2.59
TRADD-202ENST00000486556 ANKRD30BQ9BXX2 1392 aa31.24■■■□□ 2.59
TRADD-202ENST00000486556 PPP1R15AO75807 674 aaPredicted RBP31.23■■■□□ 2.59
TRADD-202ENST00000486556 CFAP74Q9C0B2 1584 aa31.22■■■□□ 2.59
TRADD-202ENST00000486556 ERBINQ96RT1 1412 aa31.19■■■□□ 2.58
TRADD-202ENST00000486556 FOXD1Q16676 465 aa31.17■■■□□ 2.58
TRADD-202ENST00000486556 GLI2P10070 1586 aa31.15■■■□□ 2.58
TRADD-202ENST00000486556 PKD2Q13563 968 aa31.14■■■□□ 2.58
TRADD-202ENST00000486556 ZFYVE16Q7Z3T8 1539 aa31.14■■■□□ 2.58
TRADD-202ENST00000486556 NEO1Q92859 1461 aa31.13■■■□□ 2.57
TRADD-202ENST00000486556 ZNF518AQ6AHZ1 1483 aa31.11■■■□□ 2.57
TRADD-202ENST00000486556 UNC13BO14795 1591 aa31.11■■■□□ 2.57
TRADD-202ENST00000486556 RPRD2Q5VT52 1461 aaKnown RBP31.1■■■□□ 2.57
TRADD-202ENST00000486556 ATP7AQ04656 1500 aa31.1■■■□□ 2.57
TRADD-202ENST00000486556 INO80Q9ULG1 1556 aaPredicted RBP31.09■■■□□ 2.57
TRADD-202ENST00000486556 MAP3K4Q9Y6R4 1608 aa31.07■■■□□ 2.56
TRADD-202ENST00000486556 FAM135AQ9P2D6 1515 aa31.06■■■□□ 2.56
TRADD-202ENST00000486556 DIEXFQ68CQ4 756 aaKnown RBP31.03■■■□□ 2.56
TRADD-202ENST00000486556 MAGI2Q86UL8 1455 aa31.03■■■□□ 2.56
TRADD-202ENST00000486556 POGZQ7Z3K3 1410 aa31.02■■■□□ 2.56
TRADD-202ENST00000486556 MYT1LQ9UL68 1186 aa31.01■■■□□ 2.56
TRADD-202ENST00000486556 KDM5CP41229 1560 aa30.99■■■□□ 2.55
TRADD-202ENST00000486556 DHX29Q7Z478 1369 aaKnown RBP30.99■■■□□ 2.55
TRADD-202ENST00000486556 FAM69CQ0P6D2 419 aa30.99■■■□□ 2.55
TRADD-202ENST00000486556 IQGAP3Q86VI3 1631 aa30.99■■■□□ 2.55
TRADD-202ENST00000486556 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.98■■■□□ 2.55
TRADD-202ENST00000486556 MLH3Q9UHC1 1453 aa30.98■■■□□ 2.55
TRADD-202ENST00000486556 DIP2BQ9P265 1576 aa30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms