RNA–Protein interactions for RNA: ENST00000486446.2

PUDP-204, Transcript of pseudouridine 5'-phosphatase, human

TSL 2

Gene PUDP, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUDP-204	ENST00000486446	FHAD1	B1AJZ9	1412 aa		12.11	□□□□□ -0.47
PUDP-204	ENST00000486446	PYGB	P11216	843 aa		12.1	□□□□□ -0.47
PUDP-204	ENST00000486446	CEP170	Q5SW79	1584 aa		12.06	□□□□□ -0.48
PUDP-204	ENST00000486446	PCDHB13	Q9Y5F0	798 aa		12.06	□□□□□ -0.48
PUDP-204	ENST00000486446	KIF27	Q86VH2	1401 aa		12.05	□□□□□ -0.48
PUDP-204	ENST00000486446	NUP160	Q12769	1436 aa		12.04	□□□□□ -0.48
PUDP-204	ENST00000486446	POTEI	P0CG38	1075 aa		12.04	□□□□□ -0.48
PUDP-204	ENST00000486446	IFNL1	Q8IU54	200 aa		12.03	□□□□□ -0.48
PUDP-204	ENST00000486446	DCBLD2	Q96PD2	775 aa		12.01	□□□□□ -0.49
PUDP-204	ENST00000486446	TRPC6	Q9Y210	931 aa		12	□□□□□ -0.49
PUDP-204	ENST00000486446	CUL7	Q14999	1698 aa		12	□□□□□ -0.49
PUDP-204	ENST00000486446	IGF1R	P08069	1367 aa		11.99	□□□□□ -0.49
PUDP-204	ENST00000486446	ERCC6L2	Q5T890	1561 aa		11.99	□□□□□ -0.49
PUDP-204	ENST00000486446	SHROOM2	Q13796	1616 aa		11.98	□□□□□ -0.49
PUDP-204	ENST00000486446	PKD2	Q13563	968 aa		11.98	□□□□□ -0.49
PUDP-204	ENST00000486446	RUSC2	Q8N2Y8	1516 aa		11.96	□□□□□ -0.49
PUDP-204	ENST00000486446	TIE1	P35590	1138 aa		11.96	□□□□□ -0.49
PUDP-204	ENST00000486446	ASTL	Q6HA08	431 aa	Predicted RBP	11.96	□□□□□ -0.49
PUDP-204	ENST00000486446	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.96	□□□□□ -0.49
PUDP-204	ENST00000486446	PCDHB8	Q9UN66	801 aa		11.96	□□□□□ -0.49
PUDP-204	ENST00000486446	KDM4F	A0A1W2PPD8	638 aa		11.95	□□□□□ -0.5
PUDP-204	ENST00000486446	ATMIN	O43313	823 aa	Predicted RBP	11.94	□□□□□ -0.5
PUDP-204	ENST00000486446	JPH4	Q96JJ6	628 aa		11.94	□□□□□ -0.5
PUDP-204	ENST00000486446	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.94	□□□□□ -0.5
PUDP-204	ENST00000486446	PRG4	Q92954	1404 aa	Predicted RBP	11.94	□□□□□ -0.5
PUDP-204	ENST00000486446	CARMIL1	Q5VZK9	1371 aa		11.93	□□□□□ -0.5
PUDP-204	ENST00000486446	KIAA0586	Q9BVV6	1533 aa		11.91	□□□□□ -0.5
PUDP-204	ENST00000486446	PELP1	Q8IZL8	1130 aa	Known RBP	11.9	□□□□□ -0.5
PUDP-204	ENST00000486446	TTLL13P	A6NNM8	815 aa		11.89	□□□□□ -0.51
PUDP-204	ENST00000486446	ATN1	P54259	1190 aa	Predicted RBP	11.89	□□□□□ -0.51
PUDP-204	ENST00000486446	RNF25	Q96BH1	459 aa	Predicted RBP	11.89	□□□□□ -0.51
PUDP-204	ENST00000486446	ECM2	O94769	699 aa	Predicted RBP	11.88	□□□□□ -0.51
PUDP-204	ENST00000486446	TMEM106C	Q9BVX2	250 aa		11.86	□□□□□ -0.51
PUDP-204	ENST00000486446	RAPGEF2	Q9Y4G8	1499 aa		11.85	□□□□□ -0.51
PUDP-204	ENST00000486446	RIOK3	O14730	519 aa	Known RBP	11.84	□□□□□ -0.51
PUDP-204	ENST00000486446	PDAP1	Q13442	181 aa	Known RBP	11.84	□□□□□ -0.51
PUDP-204	ENST00000486446	IQGAP2	Q13576	1575 aa		11.84	□□□□□ -0.51
PUDP-204	ENST00000486446	PSEN1	P49768	467 aa		11.83	□□□□□ -0.52
PUDP-204	ENST00000486446	TTBK1	Q5TCY1	1321 aa	Predicted RBP	11.82	□□□□□ -0.52
PUDP-204	ENST00000486446	CARMIL2	Q6F5E8	1435 aa		11.81	□□□□□ -0.52
PUDP-204	ENST00000486446	RGL2	O15211	777 aa		11.8	□□□□□ -0.52
PUDP-204	ENST00000486446	SLC39A7	Q92504	469 aa		11.8	□□□□□ -0.52
PUDP-204	ENST00000486446	TRIM35	Q9UPQ4	493 aa		11.8	□□□□□ -0.52
PUDP-204	ENST00000486446	C7	P10643	843 aa		11.79	□□□□□ -0.52
PUDP-204	ENST00000486446	CTTNBP2	Q8WZ74	1663 aa		11.78	□□□□□ -0.52
PUDP-204	ENST00000486446	PTPRG	P23470	1445 aa		11.77	□□□□□ -0.52
PUDP-204	ENST00000486446	VGF	O15240	615 aa	Predicted RBP	11.77	□□□□□ -0.53
PUDP-204	ENST00000486446	FAM69C	Q0P6D2	419 aa		11.77	□□□□□ -0.53
PUDP-204	ENST00000486446	ADCY10	Q96PN6	1610 aa		11.77	□□□□□ -0.53
PUDP-204	ENST00000486446	TNIK	Q9UKE5	1360 aa		11.77	□□□□□ -0.53
PUDP-204	ENST00000486446	FBXO41	Q8TF61	875 aa		11.76	□□□□□ -0.53
PUDP-204	ENST00000486446	PRX	Q9BXM0	1461 aa		11.76	□□□□□ -0.53
PUDP-204	ENST00000486446	METRN	Q9UJH8	293 aa		11.75	□□□□□ -0.53
PUDP-204	ENST00000486446	UGGT2	Q9NYU1	1516 aa		11.75	□□□□□ -0.53
PUDP-204	ENST00000486446	IER5L	Q5T953	404 aa		11.74	□□□□□ -0.53
PUDP-204	ENST00000486446	DISP1	Q96F81	1524 aa		11.74	□□□□□ -0.53
PUDP-204	ENST00000486446	TAOK2	Q9UL54	1235 aa		11.73	□□□□□ -0.53
PUDP-204	ENST00000486446	KIAA0556	O60303	1618 aa		11.72	□□□□□ -0.53
PUDP-204	ENST00000486446	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.72	□□□□□ -0.53
PUDP-204	ENST00000486446	ZFP91	Q96JP5	570 aa	Predicted RBP	11.72	□□□□□ -0.53
PUDP-204	ENST00000486446	KIF13A	Q9H1H9	1805 aa		11.72	□□□□□ -0.53
PUDP-204	ENST00000486446	MAPKBP1	O60336	1514 aa		11.71	□□□□□ -0.53
PUDP-204	ENST00000486446	EEA1	Q15075	1411 aa		11.71	□□□□□ -0.53
PUDP-204	ENST00000486446	POTEF	A5A3E0	1075 aa		11.71	□□□□□ -0.53
PUDP-204	ENST00000486446	FAM9A	Q8IZU1	332 aa	Predicted RBP	11.71	□□□□□ -0.53
PUDP-204	ENST00000486446	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.7	□□□□□ -0.54
PUDP-204	ENST00000486446	GOLGA3	Q08378	1498 aa		11.7	□□□□□ -0.54
PUDP-204	ENST00000486446	UACA	Q9BZF9	1416 aa		11.69	□□□□□ -0.54
PUDP-204	ENST00000486446	ABCC2	Q92887	1545 aa		11.68	□□□□□ -0.54
PUDP-204	ENST00000486446	ABCC10	Q5T3U5	1492 aa		11.68	□□□□□ -0.54
PUDP-204	ENST00000486446	DIP2B	Q9P265	1576 aa		11.67	□□□□□ -0.54
PUDP-204	ENST00000486446	CABP2	Q9NPB3	220 aa		11.67	□□□□□ -0.54
PUDP-204	ENST00000486446	COLQ	Q9Y215	455 aa	Predicted RBP	11.67	□□□□□ -0.54
PUDP-204	ENST00000486446	UHRF1BP1L	A0JNW5	1464 aa		11.67	□□□□□ -0.54
PUDP-204	ENST00000486446	POTEB2	H3BUK9	544 aa		11.66	□□□□□ -0.54
PUDP-204	ENST00000486446	IRX5	P78411	483 aa	Predicted RBP	11.66	□□□□□ -0.54
PUDP-204	ENST00000486446	LHX8	Q68G74	356 aa		11.66	□□□□□ -0.54
PUDP-204	ENST00000486446	RTN4	Q9NQC3	1192 aa	Known RBP	11.66	□□□□□ -0.54
PUDP-204	ENST00000486446	GOLGA2	Q08379	1002 aa		11.65	□□□□□ -0.54
PUDP-204	ENST00000486446	HECW2	Q9P2P5	1572 aa		11.65	□□□□□ -0.54
PUDP-204	ENST00000486446	LMTK3	Q96Q04	1460 aa		11.64	□□□□□ -0.55
PUDP-204	ENST00000486446	MKRN3	Q13064	507 aa	Known RBP	11.64	□□□□□ -0.55
PUDP-204	ENST00000486446	KDM6B	O15054	1643 aa		11.64	□□□□□ -0.55
PUDP-204	ENST00000486446	ASXL2	Q76L83	1435 aa		11.63	□□□□□ -0.55
PUDP-204	ENST00000486446	P3H3	Q8IVL6	736 aa		11.63	□□□□□ -0.55
PUDP-204	ENST00000486446	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.63	□□□□□ -0.55
PUDP-204	ENST00000486446	ZCCHC11	Q5TAX3	1644 aa	Known RBP	11.62	□□□□□ -0.55
PUDP-204	ENST00000486446	SEC24B	O95487	1268 aa		11.62	□□□□□ -0.55
PUDP-204	ENST00000486446	OCEL1	Q9H607	264 aa		11.62	□□□□□ -0.55
PUDP-204	ENST00000486446	PLB1	Q6P1J6	1458 aa		11.62	□□□□□ -0.55
PUDP-204	ENST00000486446	KDM5B	Q9UGL1	1544 aa		11.61	□□□□□ -0.55
PUDP-204	ENST00000486446	KIF21B	O75037	1637 aa		11.61	□□□□□ -0.55
PUDP-204	ENST00000486446	STK25	O00506	426 aa		11.61	□□□□□ -0.55
PUDP-204	ENST00000486446	RANGAP1	P46060	587 aa	Predicted RBP	11.61	□□□□□ -0.55
PUDP-204	ENST00000486446	EFCAB3	Q8N7B9	438 aa		11.61	□□□□□ -0.55
PUDP-204	ENST00000486446	ADGRL1	O94910	1474 aa		11.61	□□□□□ -0.55
PUDP-204	ENST00000486446	TSPOAP1	O95153	1857 aa		11.61	□□□□□ -0.55
PUDP-204	ENST00000486446	ABCA8	O94911	1581 aa		11.59	□□□□□ -0.55
PUDP-204	ENST00000486446	SOCS7	O14512	581 aa		11.59	□□□□□ -0.55
PUDP-204	ENST00000486446	POTEJ	P0CG39	1038 aa		11.59	□□□□□ -0.55

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