RNA–Protein interactions for RNA: ENST00000486101.1

MRPL38-212, Transcript of mitochondrial ribosomal protein L38, humanhuman

TSL 2

Gene MRPL38, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL38-212ENST00000486101 UPF1Q92900 1129 aaKnown RBP eCLIP20.67■□□□□ 0.9
MRPL38-212ENST00000486101 ZMYM4Q5VZL5 1548 aa20.66■□□□□ 0.9
MRPL38-212ENST00000486101 KIAA0556O60303 1618 aa20.66■□□□□ 0.9
MRPL38-212ENST00000486101 EFCAB5A4FU69 1503 aa20.65■□□□□ 0.9
MRPL38-212ENST00000486101 UGGT2Q9NYU1 1516 aa20.65■□□□□ 0.9
MRPL38-212ENST00000486101 ABCA8O94911 1581 aa20.63■□□□□ 0.89
MRPL38-212ENST00000486101 NCKAP5LQ9HCH0 1330 aa20.62■□□□□ 0.89
MRPL38-212ENST00000486101 CAMSAP1Q5T5Y3 1602 aa20.62■□□□□ 0.89
MRPL38-212ENST00000486101 MAGI2Q86UL8 1455 aa20.62■□□□□ 0.89
MRPL38-212ENST00000486101 ALKQ9UM73 1620 aa20.6■□□□□ 0.89
MRPL38-212ENST00000486101 TRAPPC8Q9Y2L5 1435 aa20.58■□□□□ 0.88
MRPL38-212ENST00000486101 CARMIL1Q5VZK9 1371 aa20.55■□□□□ 0.88
MRPL38-212ENST00000486101 C3P01024 1663 aa20.54■□□□□ 0.88
MRPL38-212ENST00000486101 PTPRKQ15262 1439 aa20.53■□□□□ 0.88
MRPL38-212ENST00000486101 PKD2Q13563 968 aa20.51■□□□□ 0.87
MRPL38-212ENST00000486101 ATP10AO60312 1499 aa20.5■□□□□ 0.87
MRPL38-212ENST00000486101 CPS1P31327 1500 aa20.49■□□□□ 0.87
MRPL38-212ENST00000486101 SENP3Q9H4L4 574 aaPredicted RBP20.49■□□□□ 0.87
MRPL38-212ENST00000486101 HECW1Q76N89 1606 aa20.49■□□□□ 0.87
MRPL38-212ENST00000486101 C9orf84Q5VXU9 1444 aa20.47■□□□□ 0.87
MRPL38-212ENST00000486101 IFFO2Q5TF58 517 aa20.47■□□□□ 0.87
MRPL38-212ENST00000486101 ATP10BO94823 1461 aa20.47■□□□□ 0.87
MRPL38-212ENST00000486101 TCOF1Q13428 1488 aaKnown RBP20.45■□□□□ 0.86
MRPL38-212ENST00000486101 PPP6R1Q9UPN7 881 aa20.45■□□□□ 0.86
MRPL38-212ENST00000486101 PLA2R1Q13018 1463 aa20.44■□□□□ 0.86
MRPL38-212ENST00000486101 PRXQ9BXM0 1461 aa20.43■□□□□ 0.86
MRPL38-212ENST00000486101 RAPGEF2Q9Y4G8 1499 aa20.41■□□□□ 0.86
MRPL38-212ENST00000486101 EEA1Q15075 1411 aa20.39■□□□□ 0.85
MRPL38-212ENST00000486101 ARID3CA6NKF2 412 aa20.39■□□□□ 0.85
MRPL38-212ENST00000486101 SHANK2Q9UPX8 1470 aa20.37■□□□□ 0.85
MRPL38-212ENST00000486101 CFAP74Q9C0B2 1584 aa20.37■□□□□ 0.85
MRPL38-212ENST00000486101 CHIC1Q5VXU3 224 aa20.35■□□□□ 0.85
MRPL38-212ENST00000486101 NPATQ14207 1427 aa20.32■□□□□ 0.84
MRPL38-212ENST00000486101 GOLGA3Q08378 1498 aa20.26■□□□□ 0.83
MRPL38-212ENST00000486101 CSRNP3Q8WYN3 585 aa20.26■□□□□ 0.83
MRPL38-212ENST00000486101 ZNF142P52746 1687 aaPredicted RBP20.26■□□□□ 0.83
MRPL38-212ENST00000486101 ESF1Q9H501 851 aaKnown RBP20.25■□□□□ 0.83
MRPL38-212ENST00000486101 SCAPERQ9BY12 1400 aa20.24■□□□□ 0.83
MRPL38-212ENST00000486101 AGLP35573 1532 aa20.22■□□□□ 0.83
MRPL38-212ENST00000486101 CNTLNQ9NXG0 1405 aa20.21■□□□□ 0.83
MRPL38-212ENST00000486101 SUPT6HQ7KZ85 1726 aaKnown RBP20.21■□□□□ 0.83
MRPL38-212ENST00000486101 TRIM52Q96A61 297 aa20.19■□□□□ 0.82
MRPL38-212ENST00000486101 VWDEQ8N2E2 1590 aa20.19■□□□□ 0.82
MRPL38-212ENST00000486101 REREQ9P2R6 1566 aa20.18■□□□□ 0.82
MRPL38-212ENST00000486101 CEP170BQ9Y4F5 1589 aaPredicted RBP20.18■□□□□ 0.82
MRPL38-212ENST00000486101 LRRC7Q96NW7 1537 aa20.17■□□□□ 0.82
MRPL38-212ENST00000486101 CTTNBP2Q8WZ74 1663 aa20.16■□□□□ 0.82
MRPL38-212ENST00000486101 RNF17Q9BXT8 1623 aaKnown RBP20.16■□□□□ 0.82
MRPL38-212ENST00000486101 SETBP1Q9Y6X0 1596 aa20.15■□□□□ 0.82
MRPL38-212ENST00000486101 MYO3AQ8NEV4 1616 aa20.15■□□□□ 0.82
MRPL38-212ENST00000486101 NEURL4Q96JN8 1562 aa20.13■□□□□ 0.81
MRPL38-212ENST00000486101 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.13■□□□□ 0.81
MRPL38-212ENST00000486101 RBM33Q96EV2 1170 aaKnown RBP20.13■□□□□ 0.81
MRPL38-212ENST00000486101 ZRANB1Q9UGI0 708 aa20.12■□□□□ 0.81
MRPL38-212ENST00000486101 ZMYM3Q14202 1370 aa20.11■□□□□ 0.81
MRPL38-212ENST00000486101 MROH2AA6NES4 1674 aa20.1■□□□□ 0.81
MRPL38-212ENST00000486101 DIP2CQ9Y2E4 1556 aa20.09■□□□□ 0.81
MRPL38-212ENST00000486101 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.09■□□□□ 0.81
MRPL38-212ENST00000486101 HNRNPUL2Q1KMD3 747 aaKnown RBP20.09■□□□□ 0.81
MRPL38-212ENST00000486101 POLR1AO95602 1720 aaPredicted RBP20.06■□□□□ 0.8
MRPL38-212ENST00000486101 FAM135BQ49AJ0 1406 aa20.06■□□□□ 0.8
MRPL38-212ENST00000486101 FAM9AQ8IZU1 332 aaPredicted RBP20.06■□□□□ 0.8
MRPL38-212ENST00000486101 CDK12Q9NYV4 1490 aaPredicted RBP20.05■□□□□ 0.8
MRPL38-212ENST00000486101 FOXD1Q16676 465 aa20.03■□□□□ 0.8
MRPL38-212ENST00000486101 ZNF772Q68DY9 489 aaPredicted RBP20.03■□□□□ 0.8
MRPL38-212ENST00000486101 KDM5CP41229 1560 aa20.02■□□□□ 0.8
MRPL38-212ENST00000486101 STRCP1A6NGW2 1772 aa20.02■□□□□ 0.8
MRPL38-212ENST00000486101 SAMD9Q5K651 1589 aa20.01■□□□□ 0.79
MRPL38-212ENST00000486101 ZNF518AQ6AHZ1 1483 aa20.01■□□□□ 0.79
MRPL38-212ENST00000486101 DNMT1P26358 1616 aaKnown RBP20.01■□□□□ 0.79
MRPL38-212ENST00000486101 PLEKHD1A6NEE1 506 aa20■□□□□ 0.79
MRPL38-212ENST00000486101 RXRBP28702 533 aa20■□□□□ 0.79
MRPL38-212ENST00000486101 PLCH2O75038 1416 aa20■□□□□ 0.79
MRPL38-212ENST00000486101 SYNMO15061 1565 aa19.99■□□□□ 0.79
MRPL38-212ENST00000486101 A2ML1A8K2U0 1454 aa19.99■□□□□ 0.79
MRPL38-212ENST00000486101 AFAP1Q8N556 730 aa19.98■□□□□ 0.79
MRPL38-212ENST00000486101 ABCA6Q8N139 1617 aa19.98■□□□□ 0.79
MRPL38-212ENST00000486101 RAPGEF6Q8TEU7 1601 aa19.97■□□□□ 0.79
MRPL38-212ENST00000486101 NUP153P49790 1475 aaKnown RBP19.94■□□□□ 0.78
MRPL38-212ENST00000486101 MED14O60244 1454 aa19.92■□□□□ 0.78
MRPL38-212ENST00000486101 MYT1LQ9UL68 1186 aa19.92■□□□□ 0.78
MRPL38-212ENST00000486101 MLH3Q9UHC1 1453 aa19.92■□□□□ 0.78
MRPL38-212ENST00000486101 EFCAB2Q5VUJ9 269 aa19.9■□□□□ 0.78
MRPL38-212ENST00000486101 ANKLE2Q86XL3 938 aa19.9■□□□□ 0.78
MRPL38-212ENST00000486101 NPHP4O75161 1426 aaPredicted RBP19.89■□□□□ 0.77
MRPL38-212ENST00000486101 CDK13Q14004 1512 aaKnown RBP19.89■□□□□ 0.77
MRPL38-212ENST00000486101 P3H3Q8IVL6 736 aa19.89■□□□□ 0.77
MRPL38-212ENST00000486101 JCADQ9P266 1359 aa19.89■□□□□ 0.77
MRPL38-212ENST00000486101 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.87■□□□□ 0.77
MRPL38-212ENST00000486101 LRP6O75581 1613 aa19.87■□□□□ 0.77
MRPL38-212ENST00000486101 LRP5O75197 1615 aa19.86■□□□□ 0.77
MRPL38-212ENST00000486101 CLTCQ00610 1675 aaKnown RBP19.84■□□□□ 0.77
MRPL38-212ENST00000486101 ROBO1Q9Y6N7 1651 aa19.84■□□□□ 0.77
MRPL38-212ENST00000486101 DEPDC5O75140 1603 aa19.83■□□□□ 0.76
MRPL38-212ENST00000486101 XIRP1Q702N8 1843 aaKnown RBP19.83■□□□□ 0.76
MRPL38-212ENST00000486101 RGS12O14924 1447 aa19.81■□□□□ 0.76
MRPL38-212ENST00000486101 IQGAP1P46940 1657 aa19.79■□□□□ 0.76
MRPL38-212ENST00000486101 YY1P25490 414 aa19.79■□□□□ 0.76
MRPL38-212ENST00000486101 MEX3CQ5U5Q3 659 aaKnown RBP19.79■□□□□ 0.76
MRPL38-212ENST00000486101 ARHGAP35Q9NRY4 1499 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms