RNA–Protein interactions for RNA: ENST00000485886.1

MVB12B-204, Transcript of multivesicular body subunit 12B, humanhuman

TSL 2

Gene MVB12B, Length 4,537 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MVB12B-204ENST00000485886 STK26Q9P289 416 aa16.92■□□□□ 0.3
MVB12B-204ENST00000485886 MORC1Q86VD1 984 aa16.91■□□□□ 0.3
MVB12B-204ENST00000485886 SOX12O15370 315 aa16.9■□□□□ 0.3
MVB12B-204ENST00000485886 ROCK2O75116 1388 aaKnown RBP16.9■□□□□ 0.3
MVB12B-204ENST00000485886 KIF3BO15066 747 aa16.88■□□□□ 0.29
MVB12B-204ENST00000485886 KTN1Q86UP2 1357 aaKnown RBP16.88■□□□□ 0.29
MVB12B-204ENST00000485886 FANCD2Q9BXW9 1451 aa16.85■□□□□ 0.29
MVB12B-204ENST00000485886 RBM19Q9Y4C8 960 aaKnown RBP16.85■□□□□ 0.29
MVB12B-204ENST00000485886 IGF1RP08069 1367 aa16.85■□□□□ 0.29
MVB12B-204ENST00000485886 NOP58Q9Y2X3 529 aaKnown RBP16.83■□□□□ 0.28
MVB12B-204ENST00000485886 HAP1P54257 671 aaPredicted RBP16.82■□□□□ 0.28
MVB12B-204ENST00000485886 RALBP1Q15311 655 aa16.82■□□□□ 0.28
MVB12B-204ENST00000485886 CCDC18Q5T9S5 1454 aa16.81■□□□□ 0.28
MVB12B-204ENST00000485886 RCAN3Q9UKA8 241 aa16.81■□□□□ 0.28
MVB12B-204ENST00000485886 ST20-MTHFSA0A0A6YYL1 179 aa16.79■□□□□ 0.28
MVB12B-204ENST00000485886 SPAG9O60271 1321 aaKnown RBP16.79■□□□□ 0.28
MVB12B-204ENST00000485886 U2AF1L5P0DN76 240 aaPredicted RBP16.79■□□□□ 0.28
MVB12B-204ENST00000485886 U2AF1Q01081 240 aaKnown RBP eCLIP16.79■□□□□ 0.28
MVB12B-204ENST00000485886 MS4A1P11836 297 aa16.78■□□□□ 0.28
MVB12B-204ENST00000485886 NCLP19338 710 aaKnown RBP16.77■□□□□ 0.28
MVB12B-204ENST00000485886 RSPH4AQ5TD94 716 aa16.77■□□□□ 0.28
MVB12B-204ENST00000485886 NUTM2DQ5VT03 806 aaPredicted RBP16.77■□□□□ 0.28
MVB12B-204ENST00000485886 PNNQ9H307 717 aaKnown RBP16.77■□□□□ 0.27
MVB12B-204ENST00000485886 GOLGA6L22H0YM25 854 aa16.76■□□□□ 0.27
MVB12B-204ENST00000485886 FGD5Q6ZNL6 1462 aa16.75■□□□□ 0.27
MVB12B-204ENST00000485886 TRHP20396 242 aaPredicted RBP16.75■□□□□ 0.27
MVB12B-204ENST00000485886 NLRP13Q86W25 1043 aa16.75■□□□□ 0.27
MVB12B-204ENST00000485886 RAD54L2Q9Y4B4 1467 aa16.75■□□□□ 0.27
MVB12B-204ENST00000485886 HDGFP51858 240 aaKnown RBP16.74■□□□□ 0.27
MVB12B-204ENST00000485886 TPRNQ4KMQ1 711 aa16.74■□□□□ 0.27
MVB12B-204ENST00000485886 CASC1Q6TDU7 716 aa16.73■□□□□ 0.27
MVB12B-204ENST00000485886 HDGFL2Q7Z4V5 671 aaPredicted RBP16.72■□□□□ 0.27
MVB12B-204ENST00000485886 ERICH6BQ5W0A0 696 aa16.71■□□□□ 0.27
MVB12B-204ENST00000485886 CHMP4BQ9H444 224 aaKnown RBP16.71■□□□□ 0.27
MVB12B-204ENST00000485886 TSHZ2Q9NRE2 1034 aa16.71■□□□□ 0.27
MVB12B-204ENST00000485886 ZNF644Q9H582 1327 aaPredicted RBP16.71■□□□□ 0.27
MVB12B-204ENST00000485886 CCDC146Q8IYE0 955 aa16.71■□□□□ 0.26
MVB12B-204ENST00000485886 PRKRIP1Q9H875 184 aaPredicted RBP16.71■□□□□ 0.26
MVB12B-204ENST00000485886 WASHC2CQ9Y4E1 1318 aa16.7■□□□□ 0.26
MVB12B-204ENST00000485886 TRIM44Q96DX7 344 aaPredicted RBP16.69■□□□□ 0.26
MVB12B-204ENST00000485886 TRAK1Q9UPV9 953 aa16.69■□□□□ 0.26
MVB12B-204ENST00000485886 PHLDB1Q86UU1 1377 aa16.68■□□□□ 0.26
MVB12B-204ENST00000485886 PTPRGP23470 1445 aa16.68■□□□□ 0.26
MVB12B-204ENST00000485886 GAPVD1Q14C86 1478 aa16.67■□□□□ 0.26
MVB12B-204ENST00000485886 PANK3Q9H999 370 aa16.67■□□□□ 0.26
MVB12B-204ENST00000485886 OS9Q13438 667 aaPredicted RBP16.67■□□□□ 0.26
MVB12B-204ENST00000485886 GOLGA2Q08379 1002 aa16.66■□□□□ 0.26
MVB12B-204ENST00000485886 APBB1O00213 710 aa16.65■□□□□ 0.26
MVB12B-204ENST00000485886 CCDC144AA2RUR9 1427 aa16.65■□□□□ 0.26
MVB12B-204ENST00000485886 KIF21BO75037 1637 aa16.65■□□□□ 0.26
MVB12B-204ENST00000485886 HSP90AB1P08238 724 aaKnown RBP16.65■□□□□ 0.26
MVB12B-204ENST00000485886 SPRYD3Q8NCJ5 442 aa16.65■□□□□ 0.26
MVB12B-204ENST00000485886 CLUAP1Q96AJ1 413 aa16.65■□□□□ 0.26
MVB12B-204ENST00000485886 NCAPD3P42695 1498 aa16.63■□□□□ 0.25
MVB12B-204ENST00000485886 RTF1Q92541 710 aaKnown RBP16.63■□□□□ 0.25
MVB12B-204ENST00000485886 RTN4Q9NQC3 1192 aaKnown RBP16.63■□□□□ 0.25
MVB12B-204ENST00000485886 EIF3AQ14152 1382 aaKnown RBP16.62■□□□□ 0.25
MVB12B-204ENST00000485886 FGD6Q6ZV73 1430 aa16.62■□□□□ 0.25
MVB12B-204ENST00000485886 IPO8O15397 1037 aaKnown RBP16.62■□□□□ 0.25
MVB12B-204ENST00000485886 USP47Q96K76 1375 aa16.62■□□□□ 0.25
MVB12B-204ENST00000485886 PAK3O75914 559 aaPredicted RBP16.61■□□□□ 0.25
MVB12B-204ENST00000485886 ITPRIPQ8IWB1 547 aa16.61■□□□□ 0.25
MVB12B-204ENST00000485886 TCERG1O14776 1098 aaKnown RBP16.6■□□□□ 0.25
MVB12B-204ENST00000485886 MYBBP1AQ9BQG0 1328 aaKnown RBP16.6■□□□□ 0.25
MVB12B-204ENST00000485886 NUTM2FA1L443 756 aa16.6■□□□□ 0.25
MVB12B-204ENST00000485886 TERF2IPQ9NYB0 399 aa16.6■□□□□ 0.25
MVB12B-204ENST00000485886 KIF15Q9NS87 1388 aa16.6■□□□□ 0.25
MVB12B-204ENST00000485886 PDE3BQ13370 1112 aa16.6■□□□□ 0.25
MVB12B-204ENST00000485886 RRP7AQ9Y3A4 280 aaKnown RBP16.59■□□□□ 0.25
MVB12B-204ENST00000485886 KCNJ4P48050 445 aa16.58■□□□□ 0.25
MVB12B-204ENST00000485886 AQRO60306 1485 aaKnown RBP eCLIP16.58■□□□□ 0.25
MVB12B-204ENST00000485886 ARAP1Q96P48 1450 aa16.58■□□□□ 0.24
MVB12B-204ENST00000485886 HSCBQ8IWL3 235 aa16.58■□□□□ 0.24
MVB12B-204ENST00000485886 TAOK2Q9UL54 1235 aa16.58■□□□□ 0.24
MVB12B-204ENST00000485886 SMC4Q9NTJ3 1288 aa16.58■□□□□ 0.24
MVB12B-204ENST00000485886 RWDD1Q9H446 243 aaPredicted RBP16.57■□□□□ 0.24
MVB12B-204ENST00000485886 MYOM3Q5VTT5 1437 aa16.57■□□□□ 0.24
MVB12B-204ENST00000485886 LRRC9Q6ZRR7 1453 aa16.57■□□□□ 0.24
MVB12B-204ENST00000485886 PTMAP06454 111 aaKnown RBP16.57■□□□□ 0.24
MVB12B-204ENST00000485886 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.57■□□□□ 0.24
MVB12B-204ENST00000485886 PLIN1O60240 522 aa16.56■□□□□ 0.24
MVB12B-204ENST00000485886 FGD1P98174 961 aa16.55■□□□□ 0.24
MVB12B-204ENST00000485886 SLKQ9H2G2 1235 aaPredicted RBP16.54■□□□□ 0.24
MVB12B-204ENST00000485886 CENPJQ9HC77 1338 aaPredicted RBP16.54■□□□□ 0.24
MVB12B-204ENST00000485886 DEKP35659 375 aaKnown RBP16.53■□□□□ 0.24
MVB12B-204ENST00000485886 CALD1Q05682 793 aaKnown RBP16.53■□□□□ 0.24
MVB12B-204ENST00000485886 PLCB2Q00722 1185 aa16.53■□□□□ 0.24
MVB12B-204ENST00000485886 SYNJ1O43426 1573 aa16.52■□□□□ 0.24
MVB12B-204ENST00000485886 BCL2L13Q9BXK5 485 aa16.52■□□□□ 0.24
MVB12B-204ENST00000485886 UACAQ9BZF9 1416 aa16.52■□□□□ 0.23
MVB12B-204ENST00000485886 ZBED9Q6R2W3 1325 aa16.51■□□□□ 0.23
MVB12B-204ENST00000485886 KIF7Q2M1P5 1343 aa16.51■□□□□ 0.23
MVB12B-204ENST00000485886 ZRSR1Q15695 479 aaKnown RBP16.51■□□□□ 0.23
MVB12B-204ENST00000485886 CYB5RLQ6IPT4 315 aa16.5■□□□□ 0.23
MVB12B-204ENST00000485886 EXOC6Q8TAG9 804 aa16.5■□□□□ 0.23
MVB12B-204ENST00000485886 NAP1L2Q9ULW6 460 aaPredicted RBP16.5■□□□□ 0.23
MVB12B-204ENST00000485886 APAF1O14727 1248 aa16.49■□□□□ 0.23
MVB12B-204ENST00000485886 GLIPR1L2Q4G1C9 344 aa16.49■□□□□ 0.23
MVB12B-204ENST00000485886 NGDNQ8NEJ9 315 aaKnown RBP16.49■□□□□ 0.23
MVB12B-204ENST00000485886 ELL2O00472 640 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms