RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 YEATS2Q9ULM3 1422 aa22.19■■□□□ 1.14
SCAF4-206ENST00000485790 ADAMTSL3P82987 1691 aa22.18■■□□□ 1.14
SCAF4-206ENST00000485790 ZFYVE16Q7Z3T8 1539 aa22.18■■□□□ 1.14
SCAF4-206ENST00000485790 ATP10AO60312 1499 aa22.16■■□□□ 1.14
SCAF4-206ENST00000485790 CCDC18Q5T9S5 1454 aa22.15■■□□□ 1.14
SCAF4-206ENST00000485790 ZMYM4Q5VZL5 1548 aa22.15■■□□□ 1.14
SCAF4-206ENST00000485790 ARHGEF40Q8TER5 1519 aa22.15■■□□□ 1.14
SCAF4-206ENST00000485790 ARHGAP5Q13017 1502 aa22.14■■□□□ 1.13
SCAF4-206ENST00000485790 RICTORQ6R327 1708 aa22.13■■□□□ 1.13
SCAF4-206ENST00000485790 KIF14Q15058 1648 aa22.13■■□□□ 1.13
SCAF4-206ENST00000485790 BCORL1Q5H9F3 1711 aa22.12■■□□□ 1.13
SCAF4-206ENST00000485790 ZNF518AQ6AHZ1 1483 aa22.12■■□□□ 1.13
SCAF4-206ENST00000485790 ESF1Q9H501 851 aaKnown RBP22.11■■□□□ 1.13
SCAF4-206ENST00000485790 ZNF777Q9ULD5 760 aaPredicted RBP22.11■■□□□ 1.13
SCAF4-206ENST00000485790 C9orf84Q5VXU9 1444 aa22.09■■□□□ 1.13
SCAF4-206ENST00000485790 MADDQ8WXG6 1647 aa22.07■■□□□ 1.12
SCAF4-206ENST00000485790 FYCO1Q9BQS8 1478 aa22.05■■□□□ 1.12
SCAF4-206ENST00000485790 HSPA2P54652 639 aa22.05■■□□□ 1.12
SCAF4-206ENST00000485790 CFDP1Q9UEE9 299 aaPredicted RBP22.05■■□□□ 1.12
SCAF4-206ENST00000485790 MYO5CQ9NQX4 1742 aa22.04■■□□□ 1.12
SCAF4-206ENST00000485790 CEBPAP49715 358 aaPredicted RBP22.02■■□□□ 1.12
SCAF4-206ENST00000485790 FBXO41Q8TF61 875 aa22.02■■□□□ 1.12
SCAF4-206ENST00000485790 MLH3Q9UHC1 1453 aa22.01■■□□□ 1.11
SCAF4-206ENST00000485790 PCF11O94913 1555 aaKnown RBP22■■□□□ 1.11
SCAF4-206ENST00000485790 HNRNPMP52272 730 aaKnown RBP eCLIP22■■□□□ 1.11
SCAF4-206ENST00000485790 MTUS2Q5JR59 1369 aa21.99■■□□□ 1.11
SCAF4-206ENST00000485790 LMTK3Q96Q04 1460 aa21.99■■□□□ 1.11
SCAF4-206ENST00000485790 SPAG9O60271 1321 aaKnown RBP21.99■■□□□ 1.11
SCAF4-206ENST00000485790 CCNB3Q8WWL7 1395 aa21.99■■□□□ 1.11
SCAF4-206ENST00000485790 TRAPPC8Q9Y2L5 1435 aa21.98■■□□□ 1.11
SCAF4-206ENST00000485790 DMRT2Q9Y5R5 561 aa21.97■■□□□ 1.11
SCAF4-206ENST00000485790 RIMS1Q86UR5 1692 aaKnown RBP21.97■■□□□ 1.11
SCAF4-206ENST00000485790 KDM5CP41229 1560 aa21.94■■□□□ 1.1
SCAF4-206ENST00000485790 ARHGEF12Q9NZN5 1544 aa21.93■■□□□ 1.1
SCAF4-206ENST00000485790 GPATCH8Q9UKJ3 1502 aaKnown RBP21.93■■□□□ 1.1
SCAF4-206ENST00000485790 KIAA1107Q9UPP5 1409 aa21.9■■□□□ 1.1
SCAF4-206ENST00000485790 PLEKHH2Q8IVE3 1493 aa21.9■■□□□ 1.1
SCAF4-206ENST00000485790 ABCC1P33527 1531 aa21.88■■□□□ 1.09
SCAF4-206ENST00000485790 LRRIQ1Q96JM4 1722 aa21.88■■□□□ 1.09
SCAF4-206ENST00000485790 CDC42BPBQ9Y5S2 1711 aa21.88■■□□□ 1.09
SCAF4-206ENST00000485790 PREX2Q70Z35 1606 aa21.88■■□□□ 1.09
SCAF4-206ENST00000485790 AGLP35573 1532 aa21.85■■□□□ 1.09
SCAF4-206ENST00000485790 CEP162Q5TB80 1403 aa21.85■■□□□ 1.09
SCAF4-206ENST00000485790 REREQ9P2R6 1566 aa21.85■■□□□ 1.09
SCAF4-206ENST00000485790 SIGLEC1Q9BZZ2 1709 aa21.85■■□□□ 1.09
SCAF4-206ENST00000485790 DIP2CQ9Y2E4 1556 aa21.84■■□□□ 1.09
SCAF4-206ENST00000485790 UHRF1BP1Q6BDS2 1440 aa21.84■■□□□ 1.09
SCAF4-206ENST00000485790 CNTLNQ9NXG0 1405 aa21.84■■□□□ 1.09
SCAF4-206ENST00000485790 RSPH4AQ5TD94 716 aa21.84■■□□□ 1.09
SCAF4-206ENST00000485790 PPP6R1Q9UPN7 881 aa21.84■■□□□ 1.09
SCAF4-206ENST00000485790 CERKQ8TCT0 537 aa21.83■■□□□ 1.09
SCAF4-206ENST00000485790 ZNF644Q9H582 1327 aaPredicted RBP21.82■■□□□ 1.08
SCAF4-206ENST00000485790 FER1L4A9Z1Z3 1794 aa21.82■■□□□ 1.08
SCAF4-206ENST00000485790 GGT6Q6P531 493 aa21.82■■□□□ 1.08
SCAF4-206ENST00000485790 LOC105371045A0A1W2PR82 267 aa21.81■■□□□ 1.08
SCAF4-206ENST00000485790 ZMYM3Q14202 1370 aa21.79■■□□□ 1.08
SCAF4-206ENST00000485790 SAMD9LQ8IVG5 1584 aa21.78■■□□□ 1.08
SCAF4-206ENST00000485790 CDC42BPAQ5VT25 1732 aa21.77■■□□□ 1.08
SCAF4-206ENST00000485790 ABCA6Q8N139 1617 aa21.77■■□□□ 1.07
SCAF4-206ENST00000485790 SYCP2Q9BX26 1530 aa21.76■■□□□ 1.07
SCAF4-206ENST00000485790 TSPY4P0CV99 314 aa21.76■■□□□ 1.07
SCAF4-206ENST00000485790 TSPY10P0CW01 314 aa21.76■■□□□ 1.07
SCAF4-206ENST00000485790 ITSN2Q9NZM3 1697 aa21.75■■□□□ 1.07
SCAF4-206ENST00000485790 A2MP01023 1474 aa21.74■■□□□ 1.07
SCAF4-206ENST00000485790 KIDINS220Q9ULH0 1771 aa21.72■■□□□ 1.07
SCAF4-206ENST00000485790 RTEL1-TNFRSF6BF6WH68 1400 aa21.71■■□□□ 1.07
SCAF4-206ENST00000485790 EHBP1L1Q8N3D4 1523 aa21.7■■□□□ 1.07
SCAF4-206ENST00000485790 SETD1BQ9UPS6 1966 aaKnown RBP21.7■■□□□ 1.07
SCAF4-206ENST00000485790 NPATQ14207 1427 aa21.7■■□□□ 1.06
SCAF4-206ENST00000485790 ATP7AQ04656 1500 aa21.7■■□□□ 1.06
SCAF4-206ENST00000485790 DHX29Q7Z478 1369 aaKnown RBP21.69■■□□□ 1.06
SCAF4-206ENST00000485790 KIF3BO15066 747 aa21.68■■□□□ 1.06
SCAF4-206ENST00000485790 APLP2Q06481 763 aa21.68■■□□□ 1.06
SCAF4-206ENST00000485790 MBD5Q9P267 1494 aa21.68■■□□□ 1.06
SCAF4-206ENST00000485790 PREX1Q8TCU6 1659 aa21.68■■□□□ 1.06
SCAF4-206ENST00000485790 NCOA2Q15596 1464 aa21.65■■□□□ 1.06
SCAF4-206ENST00000485790 PTPRTO14522 1441 aa21.65■■□□□ 1.06
SCAF4-206ENST00000485790 WASHC2CQ9Y4E1 1318 aa21.63■■□□□ 1.05
SCAF4-206ENST00000485790 VPS8Q8N3P4 1428 aa21.63■■□□□ 1.05
SCAF4-206ENST00000485790 TIAM1Q13009 1591 aa21.62■■□□□ 1.05
SCAF4-206ENST00000485790 PKD2Q13563 968 aa21.62■■□□□ 1.05
SCAF4-206ENST00000485790 C3P01024 1663 aa21.6■■□□□ 1.05
SCAF4-206ENST00000485790 NCKAP5LQ9HCH0 1330 aa21.59■■□□□ 1.05
SCAF4-206ENST00000485790 CCDC141Q6ZP82 1450 aa21.58■■□□□ 1.05
SCAF4-206ENST00000485790 INO80Q9ULG1 1556 aaPredicted RBP21.58■■□□□ 1.05
SCAF4-206ENST00000485790 KANK4Q5T7N3 995 aaPredicted RBP21.58■■□□□ 1.05
SCAF4-206ENST00000485790 SUPT6HQ7KZ85 1726 aaKnown RBP21.58■■□□□ 1.04
SCAF4-206ENST00000485790 PTPRKQ15262 1439 aa21.57■■□□□ 1.04
SCAF4-206ENST00000485790 LRRC9Q6ZRR7 1453 aa21.57■■□□□ 1.04
SCAF4-206ENST00000485790 NCOA1Q15788 1441 aa21.56■■□□□ 1.04
SCAF4-206ENST00000485790 PLXNC1O60486 1568 aa21.56■■□□□ 1.04
SCAF4-206ENST00000485790 CAMSAP2Q08AD1 1489 aa21.55■■□□□ 1.04
SCAF4-206ENST00000485790 FBXO31Q5XUX0 539 aaPredicted RBP21.54■■□□□ 1.04
SCAF4-206ENST00000485790 MROH2AA6NES4 1674 aa21.52■■□□□ 1.04
SCAF4-206ENST00000485790 THEMISQ8N1K5 641 aaPredicted RBP21.51■■□□□ 1.03
SCAF4-206ENST00000485790 ADGBQ8N7X0 1667 aa21.5■■□□□ 1.03
SCAF4-206ENST00000485790 MAP3K1Q13233 1512 aa21.5■■□□□ 1.03
SCAF4-206ENST00000485790 STRCQ7RTU9 1775 aa21.5■■□□□ 1.03
SCAF4-206ENST00000485790 MIA2Q96PC5 1412 aa21.49■■□□□ 1.03
SCAF4-206ENST00000485790 CAMSAP1Q5T5Y3 1602 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms