RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 KIF21AQ7Z4S6 1674 aa9.83□□□□□ -0.84
NHLRC3-205ENST00000485407 GTPBP6O43824 516 aaPredicted RBP9.82□□□□□ -0.84
NHLRC3-205ENST00000485407 CYB5RLQ6IPT4 315 aa9.81□□□□□ -0.84
NHLRC3-205ENST00000485407 RNF25Q96BH1 459 aaPredicted RBP9.81□□□□□ -0.84
NHLRC3-205ENST00000485407 RSF1Q96T23 1441 aaPredicted RBP9.8□□□□□ -0.84
NHLRC3-205ENST00000485407 BAZ1BQ9UIG0 1483 aaKnown RBP9.79□□□□□ -0.84
NHLRC3-205ENST00000485407 MRC2Q9UBG0 1479 aa9.78□□□□□ -0.84
NHLRC3-205ENST00000485407 WDR62O43379 1518 aa9.77□□□□□ -0.84
NHLRC3-205ENST00000485407 RIOK3O14730 519 aaKnown RBP9.77□□□□□ -0.85
NHLRC3-205ENST00000485407 OTUD5Q96G74 571 aa9.76□□□□□ -0.85
NHLRC3-205ENST00000485407 TRIM35Q9UPQ4 493 aa9.76□□□□□ -0.85
NHLRC3-205ENST00000485407 POTEFA5A3E0 1075 aa9.75□□□□□ -0.85
NHLRC3-205ENST00000485407 STK25O00506 426 aa9.75□□□□□ -0.85
NHLRC3-205ENST00000485407 CHRM1P11229 460 aaPredicted RBP9.75□□□□□ -0.85
NHLRC3-205ENST00000485407 TMEM106CQ9BVX2 250 aa9.75□□□□□ -0.85
NHLRC3-205ENST00000485407 PCDHB8Q9UN66 801 aa9.75□□□□□ -0.85
NHLRC3-205ENST00000485407 WIZO95785 1651 aa9.74□□□□□ -0.85
NHLRC3-205ENST00000485407 POTEJP0CG39 1038 aa9.73□□□□□ -0.85
NHLRC3-205ENST00000485407 IER5LQ5T953 404 aa9.72□□□□□ -0.85
NHLRC3-205ENST00000485407 P3H3Q8IVL6 736 aa9.72□□□□□ -0.85
NHLRC3-205ENST00000485407 ZNF467Q7Z7K2 595 aaPredicted RBP9.71□□□□□ -0.86
NHLRC3-205ENST00000485407 COLQQ9Y215 455 aaPredicted RBP9.7□□□□□ -0.86
NHLRC3-205ENST00000485407 TOP2AP11388 1531 aaKnown RBP9.68□□□□□ -0.86
NHLRC3-205ENST00000485407 ARAP1Q96P48 1450 aa9.68□□□□□ -0.86
NHLRC3-205ENST00000485407 RYDENQ9NUL5 291 aaKnown RBP9.68□□□□□ -0.86
NHLRC3-205ENST00000485407 VGFO15240 615 aaPredicted RBP9.67□□□□□ -0.86
NHLRC3-205ENST00000485407 SEC24BO95487 1268 aa9.67□□□□□ -0.86
NHLRC3-205ENST00000485407 LMOD2Q6P5Q4 547 aa9.67□□□□□ -0.86
NHLRC3-205ENST00000485407 MAMSTRQ6ZN01 415 aa9.66□□□□□ -0.86
NHLRC3-205ENST00000485407 STK24Q9Y6E0 443 aa9.65□□□□□ -0.86
NHLRC3-205ENST00000485407 SUPT5HO00267 1087 aaKnown RBP9.64□□□□□ -0.87
NHLRC3-205ENST00000485407 WDR70Q9NW82 654 aa9.64□□□□□ -0.87
NHLRC3-205ENST00000485407 IRX5P78411 483 aaPredicted RBP9.63□□□□□ -0.87
NHLRC3-205ENST00000485407 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.63□□□□□ -0.87
NHLRC3-205ENST00000485407 CADPSQ9ULU8 1353 aa9.63□□□□□ -0.87
NHLRC3-205ENST00000485407 BRPF1P55201 1214 aaPredicted RBP9.62□□□□□ -0.87
NHLRC3-205ENST00000485407 BCL11BQ9C0K0 894 aaPredicted RBP9.62□□□□□ -0.87
NHLRC3-205ENST00000485407 PSEN1P49768 467 aa9.61□□□□□ -0.87
NHLRC3-205ENST00000485407 SCUBE2Q9NQ36 999 aa9.61□□□□□ -0.87
NHLRC3-205ENST00000485407 LMTK3Q96Q04 1460 aa9.6□□□□□ -0.87
NHLRC3-205ENST00000485407 PLCG2P16885 1265 aa9.6□□□□□ -0.87
NHLRC3-205ENST00000485407 PDAP1Q13442 181 aaKnown RBP9.6□□□□□ -0.87
NHLRC3-205ENST00000485407 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.58□□□□□ -0.88
NHLRC3-205ENST00000485407 SOCS7O14512 581 aa9.58□□□□□ -0.88
NHLRC3-205ENST00000485407 KCNV2Q8TDN2 545 aa9.58□□□□□ -0.88
NHLRC3-205ENST00000485407 ZFP91Q96JP5 570 aaPredicted RBP9.58□□□□□ -0.88
NHLRC3-205ENST00000485407 CEP164Q9UPV0 1460 aa9.58□□□□□ -0.88
NHLRC3-205ENST00000485407 OCEL1Q9H607 264 aa9.57□□□□□ -0.88
NHLRC3-205ENST00000485407 CCDC88BA6NC98 1476 aa9.56□□□□□ -0.88
NHLRC3-205ENST00000485407 CFTRP13569 1480 aa9.56□□□□□ -0.88
NHLRC3-205ENST00000485407 NEUROD2Q15784 382 aa9.56□□□□□ -0.88
NHLRC3-205ENST00000485407 GOLGA2Q08379 1002 aa9.55□□□□□ -0.88
NHLRC3-205ENST00000485407 MKRN3Q13064 507 aaKnown RBP9.54□□□□□ -0.88
NHLRC3-205ENST00000485407 PDCD7Q8N8D1 485 aaKnown RBP9.53□□□□□ -0.88
NHLRC3-205ENST00000485407 CADPS2Q86UW7 1296 aa9.5□□□□□ -0.89
NHLRC3-205ENST00000485407 ZC3H15Q8WU90 426 aaKnown RBP9.5□□□□□ -0.89
NHLRC3-205ENST00000485407 CABP2Q9NPB3 220 aa9.5□□□□□ -0.89
NHLRC3-205ENST00000485407 FANCD2Q9BXW9 1451 aa9.5□□□□□ -0.89
NHLRC3-205ENST00000485407 PODXL2Q9NZ53 605 aa9.49□□□□□ -0.89
NHLRC3-205ENST00000485407 PRDM2Q13029 1718 aa9.48□□□□□ -0.89
NHLRC3-205ENST00000485407 SLC24A3Q9HC58 644 aa9.48□□□□□ -0.89
NHLRC3-205ENST00000485407 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.48□□□□□ -0.897e-12■■■■□ 26.7
NHLRC3-205ENST00000485407 ZNF608Q9ULD9 1512 aaPredicted RBP9.47□□□□□ -0.89
NHLRC3-205ENST00000485407 KDM4FA0A1W2PPD8 638 aa9.47□□□□□ -0.89
NHLRC3-205ENST00000485407 URB2Q14146 1524 aaKnown RBP9.46□□□□□ -0.89
NHLRC3-205ENST00000485407 ILDR2Q71H61 639 aa9.46□□□□□ -0.9
NHLRC3-205ENST00000485407 RANGAP1P46060 587 aaPredicted RBP9.45□□□□□ -0.9
NHLRC3-205ENST00000485407 SLAIN1Q8ND83 568 aa9.45□□□□□ -0.9
NHLRC3-205ENST00000485407 LCE2DQ5TA82 110 aaPredicted RBP9.44□□□□□ -0.9
NHLRC3-205ENST00000485407 FBXO41Q8TF61 875 aa9.43□□□□□ -0.9
NHLRC3-205ENST00000485407 IFT140Q96RY7 1462 aa9.42□□□□□ -0.9
NHLRC3-205ENST00000485407 L3MBTL3Q96JM7 780 aaPredicted RBP9.42□□□□□ -0.9
NHLRC3-205ENST00000485407 POTEMA6NI47 508 aa9.41□□□□□ -0.9
NHLRC3-205ENST00000485407 ARHGEF1Q92888 912 aaKnown RBP9.41□□□□□ -0.9
NHLRC3-205ENST00000485407 FAM163AQ96GL9 167 aaPredicted RBP9.41□□□□□ -0.9
NHLRC3-205ENST00000485407 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.41□□□□□ -0.9
NHLRC3-205ENST00000485407 CHD1O14646 1710 aa9.41□□□□□ -0.9
NHLRC3-205ENST00000485407 POTEGQ6S5H5 508 aa9.4□□□□□ -0.9
NHLRC3-205ENST00000485407 EFCAB3Q8N7B9 438 aa9.4□□□□□ -0.9
NHLRC3-205ENST00000485407 ABCC8Q09428 1581 aa9.4□□□□□ -0.9
NHLRC3-205ENST00000485407 ERCC6L2Q5T890 1561 aa9.39□□□□□ -0.91
NHLRC3-205ENST00000485407 DPY19L2Q6NUT2 758 aa9.39□□□□□ -0.91
NHLRC3-205ENST00000485407 SEMA3EO15041 775 aa9.37□□□□□ -0.91
NHLRC3-205ENST00000485407 UBTFP17480 764 aaKnown RBP9.37□□□□□ -0.91
NHLRC3-205ENST00000485407 C3orf67Q6ZVT6 689 aa9.37□□□□□ -0.91
NHLRC3-205ENST00000485407 E2F4Q16254 413 aa9.36□□□□□ -0.91
NHLRC3-205ENST00000485407 EIF4G3O43432 1585 aaKnown RBP9.36□□□□□ -0.91
NHLRC3-205ENST00000485407 TESPA1A2RU30 521 aaPredicted RBP9.35□□□□□ -0.91
NHLRC3-205ENST00000485407 BOLA1Q9Y3E2 137 aa9.34□□□□□ -0.91
NHLRC3-205ENST00000485407 CLASP1Q7Z460 1538 aa9.33□□□□□ -0.92
NHLRC3-205ENST00000485407 SOX12O15370 315 aa9.33□□□□□ -0.92
NHLRC3-205ENST00000485407 ZMYND10O75800 440 aa9.33□□□□□ -0.92
NHLRC3-205ENST00000485407 TOPBP1Q92547 1522 aa9.32□□□□□ -0.92
NHLRC3-205ENST00000485407 SMYD5Q6GMV2 418 aa9.32□□□□□ -0.92
NHLRC3-205ENST00000485407 DNMBPQ6XZF7 1577 aa9.32□□□□□ -0.92
NHLRC3-205ENST00000485407 ZMYND15Q9H091 742 aa9.31□□□□□ -0.92
NHLRC3-205ENST00000485407 GAPVD1Q14C86 1478 aa9.31□□□□□ -0.92
NHLRC3-205ENST00000485407 HECW2Q9P2P5 1572 aa9.31□□□□□ -0.92
NHLRC3-205ENST00000485407 G3V3G9 751 aa9.3□□□□□ -0.92
NHLRC3-205ENST00000485407 ST18O60284 1047 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms