RNA–Protein interactions for RNA: ENST00000485158.1

NUP188-206, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 392 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-206ENST00000485158 ARHGEF12Q9NZN5 1544 aa22.87■■□□□ 1.25
NUP188-206ENST00000485158 HSPA2P54652 639 aa22.87■■□□□ 1.25
NUP188-206ENST00000485158 ARHGAP35Q9NRY4 1499 aa22.86■■□□□ 1.25
NUP188-206ENST00000485158 C9orf84Q5VXU9 1444 aa22.86■■□□□ 1.25
NUP188-206ENST00000485158 EFCAB2Q5VUJ9 269 aa22.86■■□□□ 1.25
NUP188-206ENST00000485158 FER1L4A9Z1Z3 1794 aa22.86■■□□□ 1.25
NUP188-206ENST00000485158 CDK11AQ9UQ88 783 aaPredicted RBP22.85■■□□□ 1.25
NUP188-206ENST00000485158 MYO5CQ9NQX4 1742 aa22.85■■□□□ 1.25
NUP188-206ENST00000485158 ZNF518AQ6AHZ1 1483 aa22.82■■□□□ 1.24
NUP188-206ENST00000485158 KDM5CP41229 1560 aa22.81■■□□□ 1.24
NUP188-206ENST00000485158 TROQ12816 1431 aaPredicted RBP22.81■■□□□ 1.24
NUP188-206ENST00000485158 KIF14Q15058 1648 aa22.8■■□□□ 1.24
NUP188-206ENST00000485158 MLECQ14165 292 aa22.8■■□□□ 1.24
NUP188-206ENST00000485158 UBTFP17480 764 aaKnown RBP22.79■■□□□ 1.24
NUP188-206ENST00000485158 REREQ9P2R6 1566 aa22.76■■□□□ 1.23
NUP188-206ENST00000485158 PREX1Q8TCU6 1659 aa22.75■■□□□ 1.23
NUP188-206ENST00000485158 PLPPR3Q6T4P5 718 aa22.75■■□□□ 1.23
NUP188-206ENST00000485158 CERKQ8TCT0 537 aa22.75■■□□□ 1.23
NUP188-206ENST00000485158 CLIP1P30622 1438 aa22.74■■□□□ 1.23
NUP188-206ENST00000485158 ARHGAP5Q13017 1502 aa22.74■■□□□ 1.23
NUP188-206ENST00000485158 ATP1B4Q9UN42 357 aaPredicted RBP22.74■■□□□ 1.23
NUP188-206ENST00000485158 AFAP1Q8N556 730 aa22.73■■□□□ 1.23
NUP188-206ENST00000485158 MLH3Q9UHC1 1453 aa22.73■■□□□ 1.23
NUP188-206ENST00000485158 LRRIQ1Q96JM4 1722 aa22.71■■□□□ 1.23
NUP188-206ENST00000485158 DIP2CQ9Y2E4 1556 aa22.71■■□□□ 1.23
NUP188-206ENST00000485158 CEBPAP49715 358 aaPredicted RBP22.69■■□□□ 1.22
NUP188-206ENST00000485158 SETD1BQ9UPS6 1966 aaKnown RBP22.69■■□□□ 1.22
NUP188-206ENST00000485158 CDC42BPBQ9Y5S2 1711 aa22.68■■□□□ 1.22
NUP188-206ENST00000485158 AGLP35573 1532 aa22.67■■□□□ 1.22
NUP188-206ENST00000485158 DMRT2Q9Y5R5 561 aa22.66■■□□□ 1.22
NUP188-206ENST00000485158 STRCQ7RTU9 1775 aa22.65■■□□□ 1.22
NUP188-206ENST00000485158 UHRF1BP1Q6BDS2 1440 aa22.65■■□□□ 1.22
NUP188-206ENST00000485158 CASKIN1Q8WXD9 1431 aa22.65■■□□□ 1.22
NUP188-206ENST00000485158 PREX2Q70Z35 1606 aa22.64■■□□□ 1.22
NUP188-206ENST00000485158 ABCA6Q8N139 1617 aa22.64■■□□□ 1.22
NUP188-206ENST00000485158 ABCC1P33527 1531 aa22.64■■□□□ 1.21
NUP188-206ENST00000485158 CHIC1Q5VXU3 224 aa22.64■■□□□ 1.21
NUP188-206ENST00000485158 EHMT2Q96KQ7 1210 aa22.64■■□□□ 1.21
NUP188-206ENST00000485158 CCDC18Q5T9S5 1454 aa22.64■■□□□ 1.21
NUP188-206ENST00000485158 TRAPPC8Q9Y2L5 1435 aa22.63■■□□□ 1.21
NUP188-206ENST00000485158 ITSN2Q9NZM3 1697 aa22.59■■□□□ 1.21
NUP188-206ENST00000485158 C3P01024 1663 aa22.58■■□□□ 1.21
NUP188-206ENST00000485158 PTPRTO14522 1441 aa22.57■■□□□ 1.2
NUP188-206ENST00000485158 KIDINS220Q9ULH0 1771 aa22.57■■□□□ 1.2
NUP188-206ENST00000485158 MYT1LQ9UL68 1186 aa22.56■■□□□ 1.2
NUP188-206ENST00000485158 CNTLNQ9NXG0 1405 aa22.55■■□□□ 1.2
NUP188-206ENST00000485158 CDC42BPAQ5VT25 1732 aa22.54■■□□□ 1.2
NUP188-206ENST00000485158 FYCO1Q9BQS8 1478 aa22.54■■□□□ 1.2
NUP188-206ENST00000485158 SAMD9LQ8IVG5 1584 aa22.5■■□□□ 1.19
NUP188-206ENST00000485158 ESF1Q9H501 851 aaKnown RBP22.5■■□□□ 1.19
NUP188-206ENST00000485158 NPATQ14207 1427 aa22.48■■□□□ 1.19
NUP188-206ENST00000485158 GPATCH8Q9UKJ3 1502 aaKnown RBP22.48■■□□□ 1.19
NUP188-206ENST00000485158 NCOA1Q15788 1441 aa22.48■■□□□ 1.19
NUP188-206ENST00000485158 MROH2AA6NES4 1674 aa22.47■■□□□ 1.19
NUP188-206ENST00000485158 KIAA1107Q9UPP5 1409 aa22.46■■□□□ 1.19
NUP188-206ENST00000485158 LTBP4Q8N2S1 1624 aa22.46■■□□□ 1.19
NUP188-206ENST00000485158 IQSEC2Q5JU85 1478 aa22.44■■□□□ 1.18
NUP188-206ENST00000485158 SYCP2Q9BX26 1530 aa22.43■■□□□ 1.18
NUP188-206ENST00000485158 ZMYM3Q14202 1370 aa22.42■■□□□ 1.18
NUP188-206ENST00000485158 SPAG9O60271 1321 aaKnown RBP22.42■■□□□ 1.18
NUP188-206ENST00000485158 PLXNC1O60486 1568 aa22.42■■□□□ 1.18
NUP188-206ENST00000485158 PLEKHH2Q8IVE3 1493 aa22.41■■□□□ 1.18
NUP188-206ENST00000485158 ATP7AQ04656 1500 aa22.4■■□□□ 1.18
NUP188-206ENST00000485158 INO80Q9ULG1 1556 aaPredicted RBP22.39■■□□□ 1.18
NUP188-206ENST00000485158 HNRNPMP52272 730 aaKnown RBP eCLIP22.38■■□□□ 1.17
NUP188-206ENST00000485158 ZNF777Q9ULD5 760 aaPredicted RBP22.38■■□□□ 1.17
NUP188-206ENST00000485158 CAMSAP1Q5T5Y3 1602 aa22.37■■□□□ 1.17
NUP188-206ENST00000485158 A2MP01023 1474 aa22.35■■□□□ 1.17
NUP188-206ENST00000485158 CFDP1Q9UEE9 299 aaPredicted RBP22.35■■□□□ 1.17
NUP188-206ENST00000485158 SUPT6HQ7KZ85 1726 aaKnown RBP22.34■■□□□ 1.17
NUP188-206ENST00000485158 PPP6R1Q9UPN7 881 aa22.34■■□□□ 1.17
NUP188-206ENST00000485158 DISP3Q9P2K9 1392 aa22.34■■□□□ 1.17
NUP188-206ENST00000485158 PLA2R1Q13018 1463 aa22.34■■□□□ 1.17
NUP188-206ENST00000485158 CCNB3Q8WWL7 1395 aa22.33■■□□□ 1.17
NUP188-206ENST00000485158 ZNF142P52746 1687 aaPredicted RBP22.33■■□□□ 1.16
NUP188-206ENST00000485158 PTPRKQ15262 1439 aa22.32■■□□□ 1.16
NUP188-206ENST00000485158 ILDR2Q71H61 639 aa22.31■■□□□ 1.16
NUP188-206ENST00000485158 CLTCQ00610 1675 aaKnown RBP22.3■■□□□ 1.16
NUP188-206ENST00000485158 TCOF1Q13428 1488 aaKnown RBP22.29■■□□□ 1.16
NUP188-206ENST00000485158 MYO3AQ8NEV4 1616 aa22.29■■□□□ 1.16
NUP188-206ENST00000485158 PKD2Q13563 968 aa22.29■■□□□ 1.16
NUP188-206ENST00000485158 MBD5Q9P267 1494 aa22.28■■□□□ 1.16
NUP188-206ENST00000485158 MTUS2Q5JR59 1369 aa22.27■■□□□ 1.16
NUP188-206ENST00000485158 ADGBQ8N7X0 1667 aa22.27■■□□□ 1.16
NUP188-206ENST00000485158 CEP170BQ9Y4F5 1589 aaPredicted RBP22.27■■□□□ 1.16
NUP188-206ENST00000485158 RTEL1-TNFRSF6BF6WH68 1400 aa22.26■■□□□ 1.15
NUP188-206ENST00000485158 SOCS7O14512 581 aa22.26■■□□□ 1.15
NUP188-206ENST00000485158 NCKAP5LQ9HCH0 1330 aa22.26■■□□□ 1.15
NUP188-206ENST00000485158 TIAM1Q13009 1591 aa22.25■■□□□ 1.15
NUP188-206ENST00000485158 GGT6Q6P531 493 aa22.24■■□□□ 1.15
NUP188-206ENST00000485158 SPATA31D1Q6ZQQ2 1576 aa22.24■■□□□ 1.15
NUP188-206ENST00000485158 ZNF335Q9H4Z2 1342 aaPredicted RBP22.23■■□□□ 1.15
NUP188-206ENST00000485158 ZNF644Q9H582 1327 aaPredicted RBP22.22■■□□□ 1.15
NUP188-206ENST00000485158 CEP162Q5TB80 1403 aa22.22■■□□□ 1.15
NUP188-206ENST00000485158 EHBP1L1Q8N3D4 1523 aa22.21■■□□□ 1.15
NUP188-206ENST00000485158 DHX29Q7Z478 1369 aaKnown RBP22.21■■□□□ 1.15
NUP188-206ENST00000485158 A2ML1A8K2U0 1454 aa22.2■■□□□ 1.14
NUP188-206ENST00000485158 FAM135AQ9P2D6 1515 aa22.18■■□□□ 1.14
NUP188-206ENST00000485158 DNMT1P26358 1616 aaKnown RBP22.17■■□□□ 1.14
NUP188-206ENST00000485158 RSPH4AQ5TD94 716 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms