RNA–Protein interactions for RNA: ENST00000484979.5

PCDH17-202, Transcript of protocadherin 17, humanhuman

TSL 1 (best)

Gene PCDH17, Length 4,471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-202ENST00000484979 RTF1Q92541 710 aaKnown RBP20.57■□□□□ 0.88
PCDH17-202ENST00000484979 EID1Q9Y6B2 187 aa20.56■□□□□ 0.88
PCDH17-202ENST00000484979 NBR1Q14596 966 aa20.55■□□□□ 0.88
PCDH17-202ENST00000484979 ABCC8Q09428 1581 aa20.53■□□□□ 0.88
PCDH17-202ENST00000484979 WASHC2CQ9Y4E1 1318 aa20.53■□□□□ 0.88
PCDH17-202ENST00000484979 ZRSR1Q15695 479 aaKnown RBP20.53■□□□□ 0.88
PCDH17-202ENST00000484979 RAPGEF2Q9Y4G8 1499 aa20.52■□□□□ 0.88
PCDH17-202ENST00000484979 PAK3O75914 559 aaPredicted RBP20.52■□□□□ 0.88
PCDH17-202ENST00000484979 GOLGA2Q08379 1002 aa20.52■□□□□ 0.88
PCDH17-202ENST00000484979 HNRNPMP52272 730 aaKnown RBP eCLIP20.51■□□□□ 0.87
PCDH17-202ENST00000484979 FOXD1Q16676 465 aa20.51■□□□□ 0.87
PCDH17-202ENST00000484979 CHMP4AQ9BY43 222 aa20.51■□□□□ 0.87
PCDH17-202ENST00000484979 HSPA5P11021 654 aaKnown RBP20.51■□□□□ 0.87
PCDH17-202ENST00000484979 ATAD2BQ9ULI0 1458 aa20.5■□□□□ 0.87
PCDH17-202ENST00000484979 PPP4R2Q9NY27 417 aa20.49■□□□□ 0.87
PCDH17-202ENST00000484979 RGS3P49796 1198 aa20.49■□□□□ 0.87
PCDH17-202ENST00000484979 CSB-PGBD3P0DP91 1061 aa20.48■□□□□ 0.87
PCDH17-202ENST00000484979 FGD1P98174 961 aa20.48■□□□□ 0.87
PCDH17-202ENST00000484979 TOP2AP11388 1531 aaKnown RBP20.47■□□□□ 0.87
PCDH17-202ENST00000484979 CALD1Q05682 793 aaKnown RBP20.47■□□□□ 0.87
PCDH17-202ENST00000484979 KCNJ4P48050 445 aa20.47■□□□□ 0.87
PCDH17-202ENST00000484979 CCDC18Q5T9S5 1454 aa20.46■□□□□ 0.87
PCDH17-202ENST00000484979 KTN1Q86UP2 1357 aaKnown RBP20.46■□□□□ 0.87
PCDH17-202ENST00000484979 TERF2IPQ9NYB0 399 aa20.46■□□□□ 0.87
PCDH17-202ENST00000484979 ROCK2O75116 1388 aaKnown RBP20.46■□□□□ 0.87
PCDH17-202ENST00000484979 U2AF1L5P0DN76 240 aaPredicted RBP20.45■□□□□ 0.86
PCDH17-202ENST00000484979 U2AF1Q01081 240 aaKnown RBP eCLIP20.45■□□□□ 0.86
PCDH17-202ENST00000484979 OSCARQ8IYS5 282 aa20.45■□□□□ 0.86
PCDH17-202ENST00000484979 CCER2I3L3R5 266 aa20.45■□□□□ 0.86
PCDH17-202ENST00000484979 RAB3GAP2Q9H2M9 1393 aa20.43■□□□□ 0.86
PCDH17-202ENST00000484979 FHOD3Q2V2M9 1422 aa20.43■□□□□ 0.86
PCDH17-202ENST00000484979 IPO8O15397 1037 aaKnown RBP20.43■□□□□ 0.86
PCDH17-202ENST00000484979 CYB5RLQ6IPT4 315 aa20.43■□□□□ 0.86
PCDH17-202ENST00000484979 EIF3AQ14152 1382 aaKnown RBP20.42■□□□□ 0.86
PCDH17-202ENST00000484979 PTPRGP23470 1445 aa20.42■□□□□ 0.86
PCDH17-202ENST00000484979 RALBP1Q15311 655 aa20.39■□□□□ 0.86
PCDH17-202ENST00000484979 NGDNQ8NEJ9 315 aaKnown RBP20.39■□□□□ 0.86
PCDH17-202ENST00000484979 TRIM44Q96DX7 344 aaPredicted RBP20.36■□□□□ 0.85
PCDH17-202ENST00000484979 FANCD2Q9BXW9 1451 aa20.36■□□□□ 0.85
PCDH17-202ENST00000484979 L3MBTL2Q969R5 705 aa20.36■□□□□ 0.85
PCDH17-202ENST00000484979 CFAP44Q96MT7 982 aa20.36■□□□□ 0.85
PCDH17-202ENST00000484979 HDAC5Q9UQL6 1122 aa20.32■□□□□ 0.84
PCDH17-202ENST00000484979 CCDC9Q9Y3X0 531 aaKnown RBP20.31■□□□□ 0.84
PCDH17-202ENST00000484979 STK31Q9BXU1 1019 aa20.3■□□□□ 0.84
PCDH17-202ENST00000484979 WIZO95785 1651 aa20.3■□□□□ 0.84
PCDH17-202ENST00000484979 VGFO15240 615 aaPredicted RBP20.3■□□□□ 0.84
PCDH17-202ENST00000484979 NAP1L2Q9ULW6 460 aaPredicted RBP20.29■□□□□ 0.84
PCDH17-202ENST00000484979 ZNF330Q9Y3S2 320 aaPredicted RBP20.29■□□□□ 0.84
PCDH17-202ENST00000484979 MCCP23508 829 aa20.28■□□□□ 0.84
PCDH17-202ENST00000484979 AMPHP49418 695 aa20.27■□□□□ 0.84
PCDH17-202ENST00000484979 HSP90AB1P08238 724 aaKnown RBP20.27■□□□□ 0.84
PCDH17-202ENST00000484979 NUTM2DQ5VT03 806 aaPredicted RBP20.27■□□□□ 0.83
PCDH17-202ENST00000484979 PTMAP06454 111 aaKnown RBP20.26■□□□□ 0.83
PCDH17-202ENST00000484979 B4GALNT3Q6L9W6 998 aa20.26■□□□□ 0.83
PCDH17-202ENST00000484979 TRAK1Q9UPV9 953 aa20.26■□□□□ 0.83
PCDH17-202ENST00000484979 NLRP13Q86W25 1043 aa20.25■□□□□ 0.83
PCDH17-202ENST00000484979 TAOK2Q9UL54 1235 aa20.24■□□□□ 0.83
PCDH17-202ENST00000484979 LMOD3Q0VAK6 560 aa20.24■□□□□ 0.83
PCDH17-202ENST00000484979 CCDC144AA2RUR9 1427 aa20.23■□□□□ 0.83
PCDH17-202ENST00000484979 TMX4Q9H1E5 349 aaPredicted RBP20.22■□□□□ 0.83
PCDH17-202ENST00000484979 NUTM2FA1L443 756 aa20.22■□□□□ 0.83
PCDH17-202ENST00000484979 GOLGA6L4A6NEF3 574 aa20.22■□□□□ 0.83
PCDH17-202ENST00000484979 TPRNQ4KMQ1 711 aa20.21■□□□□ 0.83
PCDH17-202ENST00000484979 UACAQ9BZF9 1416 aa20.21■□□□□ 0.83
PCDH17-202ENST00000484979 KIAA1211Q6ZU35 1233 aa20.21■□□□□ 0.83
PCDH17-202ENST00000484979 TULP1O00294 542 aaPredicted RBP20.2■□□□□ 0.82
PCDH17-202ENST00000484979 RCAN3Q9UKA8 241 aa20.19■□□□□ 0.82
PCDH17-202ENST00000484979 SMARCA4P51532 1647 aa20.19■□□□□ 0.82
PCDH17-202ENST00000484979 RWDD1Q9H446 243 aaPredicted RBP20.18■□□□□ 0.82
PCDH17-202ENST00000484979 HSCBQ8IWL3 235 aa20.18■□□□□ 0.82
PCDH17-202ENST00000484979 APBB1O00213 710 aa20.17■□□□□ 0.82
PCDH17-202ENST00000484979 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.16■□□□□ 0.82
PCDH17-202ENST00000484979 ISY1Q9ULR0 285 aaKnown RBP20.16■□□□□ 0.82
PCDH17-202ENST00000484979 GAPVD1Q14C86 1478 aa20.16■□□□□ 0.82
PCDH17-202ENST00000484979 NRDCO43847 1150 aa20.15■□□□□ 0.82
PCDH17-202ENST00000484979 ITPRIPQ8IWB1 547 aa20.15■□□□□ 0.82
PCDH17-202ENST00000484979 LTV1Q96GA3 475 aaPredicted RBP20.15■□□□□ 0.82
PCDH17-202ENST00000484979 HMMRO75330 724 aa20.15■□□□□ 0.82
PCDH17-202ENST00000484979 ERICH6BQ5W0A0 696 aa20.14■□□□□ 0.82
PCDH17-202ENST00000484979 ST20-MTHFSA0A0A6YYL1 179 aa20.14■□□□□ 0.81
PCDH17-202ENST00000484979 FAM69CQ0P6D2 419 aa20.14■□□□□ 0.81
PCDH17-202ENST00000484979 GORABQ5T7V8 394 aa20.14■□□□□ 0.81
PCDH17-202ENST00000484979 GLIPR1L2Q4G1C9 344 aa20.14■□□□□ 0.81
PCDH17-202ENST00000484979 SMC4Q9NTJ3 1288 aa20.14■□□□□ 0.81
PCDH17-202ENST00000484979 TAF7LQ5H9L4 462 aa20.13■□□□□ 0.81
PCDH17-202ENST00000484979 PLCB2Q00722 1185 aa20.12■□□□□ 0.81
PCDH17-202ENST00000484979 PDE3BQ13370 1112 aa20.12■□□□□ 0.81
PCDH17-202ENST00000484979 EVC2Q86UK5 1308 aa20.12■□□□□ 0.81
PCDH17-202ENST00000484979 IGF1RP08069 1367 aa20.12■□□□□ 0.81
PCDH17-202ENST00000484979 PHLDB1Q86UU1 1377 aa20.11■□□□□ 0.81
PCDH17-202ENST00000484979 GTF2E1P29083 439 aaPredicted RBP20.1■□□□□ 0.81
PCDH17-202ENST00000484979 COG3Q96JB2 828 aa20.1■□□□□ 0.81
PCDH17-202ENST00000484979 GOLGA6L6A8MZA4 724 aa20.09■□□□□ 0.81
PCDH17-202ENST00000484979 DNTTIP2Q5QJE6 756 aaKnown RBP20.08■□□□□ 0.81
PCDH17-202ENST00000484979 STAC3Q96MF2 364 aa20.08■□□□□ 0.81
PCDH17-202ENST00000484979 CHMP3Q9Y3E7 222 aa20.08■□□□□ 0.81
PCDH17-202ENST00000484979 CGNL1Q0VF96 1302 aa20.07■□□□□ 0.8
PCDH17-202ENST00000484979 PMFBP1Q8TBY8 1022 aa20.06■□□□□ 0.8
PCDH17-202ENST00000484979 FGD5Q6ZNL6 1462 aa20.06■□□□□ 0.8
PCDH17-202ENST00000484979 GPATCH3Q96I76 525 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms