RNA–Protein interactions for RNA: ENST00000483785.1

SPIN1-204, Transcript of spindlin 1, humanhuman

TSL 5

Gene SPIN1, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-204ENST00000483785 ABCA8O94911 1581 aa12.24□□□□□ -0.45
SPIN1-204ENST00000483785 UHRF1BP1Q6BDS2 1440 aa12.22□□□□□ -0.45
SPIN1-204ENST00000483785 AKNAQ7Z591 1439 aa12.22□□□□□ -0.45
SPIN1-204ENST00000483785 CEBPAP49715 358 aaPredicted RBP12.2□□□□□ -0.46
SPIN1-204ENST00000483785 DENND4BO75064 1496 aaPredicted RBP12.19□□□□□ -0.46
SPIN1-204ENST00000483785 EFCAB5A4FU69 1503 aa12.18□□□□□ -0.46
SPIN1-204ENST00000483785 ZFYVE16Q7Z3T8 1539 aa12.18□□□□□ -0.46
SPIN1-204ENST00000483785 RNF39Q9H2S5 420 aa12.18□□□□□ -0.46
SPIN1-204ENST00000483785 ARID3CA6NKF2 412 aa12.17□□□□□ -0.46
SPIN1-204ENST00000483785 CTTNBP2Q8WZ74 1663 aa12.16□□□□□ -0.46
SPIN1-204ENST00000483785 HSPA1LP34931 641 aa12.16□□□□□ -0.46
SPIN1-204ENST00000483785 ARHGEF12Q9NZN5 1544 aa12.16□□□□□ -0.46
SPIN1-204ENST00000483785 ZMYM4Q5VZL5 1548 aa12.15□□□□□ -0.46
SPIN1-204ENST00000483785 CFAP74Q9C0B2 1584 aa12.14□□□□□ -0.47
SPIN1-204ENST00000483785 HOXD11P31277 338 aaPredicted RBP12.14□□□□□ -0.47
SPIN1-204ENST00000483785 FHOD3Q2V2M9 1422 aa12.13□□□□□ -0.47
SPIN1-204ENST00000483785 GOLGA3Q08378 1498 aa12.13□□□□□ -0.47
SPIN1-204ENST00000483785 ATP10BO94823 1461 aa12.12□□□□□ -0.47
SPIN1-204ENST00000483785 C3P01024 1663 aa12.12□□□□□ -0.47
SPIN1-204ENST00000483785 SUPT6HQ7KZ85 1726 aaKnown RBP12.11□□□□□ -0.47
SPIN1-204ENST00000483785 ZNF335Q9H4Z2 1342 aaPredicted RBP12.11□□□□□ -0.47
SPIN1-204ENST00000483785 MAGI2Q86UL8 1455 aa12.1□□□□□ -0.47
SPIN1-204ENST00000483785 PIP4K2BP78356 416 aa12.1□□□□□ -0.47
SPIN1-204ENST00000483785 FAM9AQ8IZU1 332 aaPredicted RBP12.1□□□□□ -0.47
SPIN1-204ENST00000483785 HECW1Q76N89 1606 aa12.1□□□□□ -0.47
SPIN1-204ENST00000483785 NCOA1Q15788 1441 aa12.1□□□□□ -0.47
SPIN1-204ENST00000483785 RAPGEF2Q9Y4G8 1499 aa12.09□□□□□ -0.47
SPIN1-204ENST00000483785 CAMSAP1Q5T5Y3 1602 aa12.07□□□□□ -0.48
SPIN1-204ENST00000483785 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.06□□□□□ -0.48
SPIN1-204ENST00000483785 HNRNPUL2Q1KMD3 747 aaKnown RBP12.06□□□□□ -0.48
SPIN1-204ENST00000483785 ATP10AO60312 1499 aa12.05□□□□□ -0.48
SPIN1-204ENST00000483785 C9orf84Q5VXU9 1444 aa12.04□□□□□ -0.48
SPIN1-204ENST00000483785 TOM1O60784 492 aa12.04□□□□□ -0.48
SPIN1-204ENST00000483785 SLC4A1APQ9BWU0 796 aaKnown RBP12.04□□□□□ -0.48
SPIN1-204ENST00000483785 SUPT5HO00267 1087 aaKnown RBP12.03□□□□□ -0.48
SPIN1-204ENST00000483785 C1QBPQ07021 282 aaKnown RBP12.02□□□□□ -0.49
SPIN1-204ENST00000483785 NCBP3Q53F19 620 aaKnown RBP12.02□□□□□ -0.49
SPIN1-204ENST00000483785 NCKAP5LQ9HCH0 1330 aa12.02□□□□□ -0.49
SPIN1-204ENST00000483785 TRAPPC8Q9Y2L5 1435 aa12.02□□□□□ -0.49
SPIN1-204ENST00000483785 RAPGEF6Q8TEU7 1601 aa12□□□□□ -0.49
SPIN1-204ENST00000483785 CNKSR2Q8WXI2 1034 aa12□□□□□ -0.49
SPIN1-204ENST00000483785 NPM3O75607 178 aaKnown RBP11.99□□□□□ -0.49
SPIN1-204ENST00000483785 ESF1Q9H501 851 aaKnown RBP11.99□□□□□ -0.49
SPIN1-204ENST00000483785 SETD1AO15047 1707 aaKnown RBP11.97□□□□□ -0.49
SPIN1-204ENST00000483785 RNF216Q9NWF9 866 aaPredicted RBP11.97□□□□□ -0.49
SPIN1-204ENST00000483785 RGS17Q9UGC6 210 aaPredicted RBP11.97□□□□□ -0.49
SPIN1-204ENST00000483785 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.96□□□□□ -0.49
SPIN1-204ENST00000483785 SCAPERQ9BY12 1400 aa11.96□□□□□ -0.49
SPIN1-204ENST00000483785 P3H3Q8IVL6 736 aa11.96□□□□□ -0.49
SPIN1-204ENST00000483785 PKD2Q13563 968 aa11.95□□□□□ -0.5
SPIN1-204ENST00000483785 PLEKHD1A6NEE1 506 aa11.93□□□□□ -0.5
SPIN1-204ENST00000483785 MYT1LQ9UL68 1186 aa11.93□□□□□ -0.5
SPIN1-204ENST00000483785 ZNF142P52746 1687 aaPredicted RBP11.93□□□□□ -0.5
SPIN1-204ENST00000483785 CPS1P31327 1500 aa11.92□□□□□ -0.5
SPIN1-204ENST00000483785 PTPRKQ15262 1439 aa11.92□□□□□ -0.5
SPIN1-204ENST00000483785 PLA2R1Q13018 1463 aa11.91□□□□□ -0.5
SPIN1-204ENST00000483785 CSRNP3Q8WYN3 585 aa11.91□□□□□ -0.5
SPIN1-204ENST00000483785 MROH2AA6NES4 1674 aa11.91□□□□□ -0.5
SPIN1-204ENST00000483785 POLR1AO95602 1720 aaPredicted RBP11.9□□□□□ -0.5
SPIN1-204ENST00000483785 MYO5CQ9NQX4 1742 aa11.9□□□□□ -0.5
SPIN1-204ENST00000483785 MYO3AQ8NEV4 1616 aa11.89□□□□□ -0.51
SPIN1-204ENST00000483785 DIP2CQ9Y2E4 1556 aa11.89□□□□□ -0.51
SPIN1-204ENST00000483785 POTEAQ6S8J7 498 aa11.89□□□□□ -0.51
SPIN1-204ENST00000483785 ALKQ9UM73 1620 aa11.89□□□□□ -0.51
SPIN1-204ENST00000483785 NUP153P49790 1475 aaKnown RBP11.89□□□□□ -0.51
SPIN1-204ENST00000483785 TCOF1Q13428 1488 aaKnown RBP11.89□□□□□ -0.51
SPIN1-204ENST00000483785 REREQ9P2R6 1566 aa11.88□□□□□ -0.51
SPIN1-204ENST00000483785 NPATQ14207 1427 aa11.88□□□□□ -0.51
SPIN1-204ENST00000483785 CNTLNQ9NXG0 1405 aa11.88□□□□□ -0.51
SPIN1-204ENST00000483785 AGLP35573 1532 aa11.88□□□□□ -0.51
SPIN1-204ENST00000483785 CEP170BQ9Y4F5 1589 aaPredicted RBP11.87□□□□□ -0.51
SPIN1-204ENST00000483785 ABCA6Q8N139 1617 aa11.86□□□□□ -0.51
SPIN1-204ENST00000483785 ZNF518AQ6AHZ1 1483 aa11.86□□□□□ -0.51
SPIN1-204ENST00000483785 SHANK2Q9UPX8 1470 aa11.86□□□□□ -0.51
SPIN1-204ENST00000483785 KDM5CP41229 1560 aa11.85□□□□□ -0.51
SPIN1-204ENST00000483785 PLCH2O75038 1416 aa11.85□□□□□ -0.51
SPIN1-204ENST00000483785 SAMD9Q5K651 1589 aa11.84□□□□□ -0.51
SPIN1-204ENST00000483785 AFAP1Q8N556 730 aa11.83□□□□□ -0.52
SPIN1-204ENST00000483785 CLTCQ00610 1675 aaKnown RBP11.82□□□□□ -0.52
SPIN1-204ENST00000483785 EFCAB2Q5VUJ9 269 aa11.82□□□□□ -0.52
SPIN1-204ENST00000483785 ZMYM3Q14202 1370 aa11.81□□□□□ -0.52
SPIN1-204ENST00000483785 UPF1Q92900 1129 aaKnown RBP eCLIP11.8□□□□□ -0.52
SPIN1-204ENST00000483785 RNF17Q9BXT8 1623 aaKnown RBP11.79□□□□□ -0.52
SPIN1-204ENST00000483785 DNMT1P26358 1616 aaKnown RBP11.78□□□□□ -0.52
SPIN1-204ENST00000483785 VWDEQ8N2E2 1590 aa11.78□□□□□ -0.52
SPIN1-204ENST00000483785 NEURL4Q96JN8 1562 aa11.78□□□□□ -0.52
SPIN1-204ENST00000483785 STRCP1A6NGW2 1772 aa11.77□□□□□ -0.52
SPIN1-204ENST00000483785 MLH3Q9UHC1 1453 aa11.76□□□□□ -0.53
SPIN1-204ENST00000483785 KIDINS220Q9ULH0 1771 aa11.76□□□□□ -0.53
SPIN1-204ENST00000483785 ARHGAP5Q13017 1502 aa11.75□□□□□ -0.53
SPIN1-204ENST00000483785 A2ML1A8K2U0 1454 aa11.74□□□□□ -0.53
SPIN1-204ENST00000483785 CDC42BPBQ9Y5S2 1711 aa11.72□□□□□ -0.53
SPIN1-204ENST00000483785 SYNMO15061 1565 aa11.72□□□□□ -0.53
SPIN1-204ENST00000483785 CDK13Q14004 1512 aaKnown RBP11.72□□□□□ -0.53
SPIN1-204ENST00000483785 ITSN2Q9NZM3 1697 aa11.71□□□□□ -0.53
SPIN1-204ENST00000483785 PRXQ9BXM0 1461 aa11.71□□□□□ -0.53
SPIN1-204ENST00000483785 LRRC7Q96NW7 1537 aa11.7□□□□□ -0.54
SPIN1-204ENST00000483785 XIRP1Q702N8 1843 aaKnown RBP11.7□□□□□ -0.54
SPIN1-204ENST00000483785 RANGAP1P46060 587 aaPredicted RBP11.7□□□□□ -0.54
SPIN1-204ENST00000483785 IQGAP1P46940 1657 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 171.2 ms