RNA–Protein interactions for RNA: ENST00000482194.1

ITM2A-206, Transcript of integral membrane protein 2A, humanhuman

TSL 2

Gene ITM2A, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-206ENST00000482194 FAM9AQ8IZU1 332 aaPredicted RBP17.89■□□□□ 0.45
ITM2A-206ENST00000482194 NCOA1Q15788 1441 aa17.89■□□□□ 0.45
ITM2A-206ENST00000482194 ATP10BO94823 1461 aa17.88■□□□□ 0.45
ITM2A-206ENST00000482194 GOLGA3Q08378 1498 aa17.88■□□□□ 0.45
ITM2A-206ENST00000482194 MAGI2Q86UL8 1455 aa17.88■□□□□ 0.45
ITM2A-206ENST00000482194 TOM1O60784 492 aa17.85■□□□□ 0.45
ITM2A-206ENST00000482194 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.82■□□□□ 0.44
ITM2A-206ENST00000482194 HNRNPUL2Q1KMD3 747 aaKnown RBP17.82■□□□□ 0.44
ITM2A-206ENST00000482194 CFAP74Q9C0B2 1584 aa17.82■□□□□ 0.44
ITM2A-206ENST00000482194 RAPGEF2Q9Y4G8 1499 aa17.82■□□□□ 0.44
ITM2A-206ENST00000482194 ATP10AO60312 1499 aa17.81■□□□□ 0.44
ITM2A-206ENST00000482194 HECW1Q76N89 1606 aa17.8■□□□□ 0.44
ITM2A-206ENST00000482194 C9orf84Q5VXU9 1444 aa17.79■□□□□ 0.44
ITM2A-206ENST00000482194 NCKAP5LQ9HCH0 1330 aa17.78■□□□□ 0.44
ITM2A-206ENST00000482194 CAMSAP1Q5T5Y3 1602 aa17.78■□□□□ 0.44
ITM2A-206ENST00000482194 TRAPPC8Q9Y2L5 1435 aa17.77■□□□□ 0.44
ITM2A-206ENST00000482194 C3P01024 1663 aa17.77■□□□□ 0.43
ITM2A-206ENST00000482194 ESF1Q9H501 851 aaKnown RBP17.75■□□□□ 0.43
ITM2A-206ENST00000482194 RGS17Q9UGC6 210 aaPredicted RBP17.74■□□□□ 0.43
ITM2A-206ENST00000482194 CTTNBP2Q8WZ74 1663 aa17.74■□□□□ 0.43
ITM2A-206ENST00000482194 SUPT5HO00267 1087 aaKnown RBP17.7■□□□□ 0.42
ITM2A-206ENST00000482194 SENP3Q9H4L4 574 aaPredicted RBP17.7■□□□□ 0.42
ITM2A-206ENST00000482194 PKD2Q13563 968 aa17.69■□□□□ 0.42
ITM2A-206ENST00000482194 SCAPERQ9BY12 1400 aa17.68■□□□□ 0.42
ITM2A-206ENST00000482194 PPP6R1Q9UPN7 881 aa17.66■□□□□ 0.42
ITM2A-206ENST00000482194 P3H3Q8IVL6 736 aa17.65■□□□□ 0.42
ITM2A-206ENST00000482194 PTPRKQ15262 1439 aa17.64■□□□□ 0.41
ITM2A-206ENST00000482194 PLEKHD1A6NEE1 506 aa17.63■□□□□ 0.41
ITM2A-206ENST00000482194 POTEAQ6S8J7 498 aa17.62■□□□□ 0.41
ITM2A-206ENST00000482194 MYT1LQ9UL68 1186 aa17.62■□□□□ 0.41
ITM2A-206ENST00000482194 PLA2R1Q13018 1463 aa17.61■□□□□ 0.41
ITM2A-206ENST00000482194 CPS1P31327 1500 aa17.61■□□□□ 0.41
ITM2A-206ENST00000482194 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.61■□□□□ 0.41
ITM2A-206ENST00000482194 RAPGEF6Q8TEU7 1601 aa17.61■□□□□ 0.41
ITM2A-206ENST00000482194 SUPT6HQ7KZ85 1726 aaKnown RBP17.61■□□□□ 0.41
ITM2A-206ENST00000482194 TCOF1Q13428 1488 aaKnown RBP17.57■□□□□ 0.4
ITM2A-206ENST00000482194 NPATQ14207 1427 aa17.57■□□□□ 0.4
ITM2A-206ENST00000482194 SETD1AO15047 1707 aaKnown RBP17.57■□□□□ 0.4
ITM2A-206ENST00000482194 CNTLNQ9NXG0 1405 aa17.56■□□□□ 0.4
ITM2A-206ENST00000482194 AGLP35573 1532 aa17.53■□□□□ 0.4
ITM2A-206ENST00000482194 SHANK2Q9UPX8 1470 aa17.53■□□□□ 0.4
ITM2A-206ENST00000482194 NUP153P49790 1475 aaKnown RBP17.51■□□□□ 0.39
ITM2A-206ENST00000482194 ALKQ9UM73 1620 aa17.51■□□□□ 0.39
ITM2A-206ENST00000482194 REREQ9P2R6 1566 aa17.51■□□□□ 0.39
ITM2A-206ENST00000482194 ZNF518AQ6AHZ1 1483 aa17.5■□□□□ 0.39
ITM2A-206ENST00000482194 ZNF142P52746 1687 aaPredicted RBP17.5■□□□□ 0.39
ITM2A-206ENST00000482194 DIP2CQ9Y2E4 1556 aa17.49■□□□□ 0.39
ITM2A-206ENST00000482194 PLCH2O75038 1416 aa17.49■□□□□ 0.39
ITM2A-206ENST00000482194 UPF1Q92900 1129 aaKnown RBP eCLIP17.49■□□□□ 0.39
ITM2A-206ENST00000482194 EFCAB2Q5VUJ9 269 aa17.48■□□□□ 0.39
ITM2A-206ENST00000482194 CEP170BQ9Y4F5 1589 aaPredicted RBP17.48■□□□□ 0.39
ITM2A-206ENST00000482194 AFAP1Q8N556 730 aa17.47■□□□□ 0.39
ITM2A-206ENST00000482194 MYO3AQ8NEV4 1616 aa17.47■□□□□ 0.39
ITM2A-206ENST00000482194 ZMYM3Q14202 1370 aa17.46■□□□□ 0.39
ITM2A-206ENST00000482194 MROH2AA6NES4 1674 aa17.45■□□□□ 0.38
ITM2A-206ENST00000482194 KDM5CP41229 1560 aa17.44■□□□□ 0.38
ITM2A-206ENST00000482194 ABCA6Q8N139 1617 aa17.43■□□□□ 0.38
ITM2A-206ENST00000482194 SRCAPQ6ZRS2 3230 aa17.42■□□□□ 0.38
ITM2A-206ENST00000482194 POLR1AO95602 1720 aaPredicted RBP17.39■□□□□ 0.37
ITM2A-206ENST00000482194 MYO5CQ9NQX4 1742 aa17.38■□□□□ 0.37
ITM2A-206ENST00000482194 SAMD9Q5K651 1589 aa17.37■□□□□ 0.37
ITM2A-206ENST00000482194 MLH3Q9UHC1 1453 aa17.36■□□□□ 0.37
ITM2A-206ENST00000482194 VWDEQ8N2E2 1590 aa17.36■□□□□ 0.37
ITM2A-206ENST00000482194 RNF17Q9BXT8 1623 aaKnown RBP17.36■□□□□ 0.37
ITM2A-206ENST00000482194 NEURL4Q96JN8 1562 aa17.34■□□□□ 0.37
ITM2A-206ENST00000482194 DNMT1P26358 1616 aaKnown RBP17.33■□□□□ 0.37
ITM2A-206ENST00000482194 A2ML1A8K2U0 1454 aa17.33■□□□□ 0.37
ITM2A-206ENST00000482194 CLTCQ00610 1675 aaKnown RBP17.32■□□□□ 0.36
ITM2A-206ENST00000482194 ANKLE2Q86XL3 938 aa17.3■□□□□ 0.36
ITM2A-206ENST00000482194 TRIM52Q96A61 297 aa17.3■□□□□ 0.36
ITM2A-206ENST00000482194 ARHGAP5Q13017 1502 aa17.3■□□□□ 0.36
ITM2A-206ENST00000482194 LRRC7Q96NW7 1537 aa17.3■□□□□ 0.36
ITM2A-206ENST00000482194 PRXQ9BXM0 1461 aa17.26■□□□□ 0.35
ITM2A-206ENST00000482194 SYNMO15061 1565 aa17.25■□□□□ 0.35
ITM2A-206ENST00000482194 CDK13Q14004 1512 aaKnown RBP17.24■□□□□ 0.35
ITM2A-206ENST00000482194 KIDINS220Q9ULH0 1771 aa17.24■□□□□ 0.35
ITM2A-206ENST00000482194 NPHP4O75161 1426 aaPredicted RBP17.23■□□□□ 0.35
ITM2A-206ENST00000482194 STRCP1A6NGW2 1772 aa17.23■□□□□ 0.35
ITM2A-206ENST00000482194 RANGAP1P46060 587 aaPredicted RBP17.23■□□□□ 0.35
ITM2A-206ENST00000482194 FAM135BQ49AJ0 1406 aa17.21■□□□□ 0.35
ITM2A-206ENST00000482194 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.2■□□□□ 0.34
ITM2A-206ENST00000482194 ZNF772Q68DY9 489 aaPredicted RBP17.19■□□□□ 0.34
ITM2A-206ENST00000482194 GGT6Q6P531 493 aa17.19■□□□□ 0.34
ITM2A-206ENST00000482194 MED14O60244 1454 aa17.18■□□□□ 0.34
ITM2A-206ENST00000482194 THEMISQ8N1K5 641 aaPredicted RBP17.18■□□□□ 0.34
ITM2A-206ENST00000482194 IQGAP1P46940 1657 aa17.17■□□□□ 0.34
ITM2A-206ENST00000482194 FOXD1Q16676 465 aa17.17■□□□□ 0.34
ITM2A-206ENST00000482194 CDK11AQ9UQ88 783 aaPredicted RBP17.16■□□□□ 0.34
ITM2A-206ENST00000482194 DEPDC5O75140 1603 aa17.16■□□□□ 0.34
ITM2A-206ENST00000482194 ITSN2Q9NZM3 1697 aa17.16■□□□□ 0.34
ITM2A-206ENST00000482194 KIF14Q15058 1648 aa17.15■□□□□ 0.34
ITM2A-206ENST00000482194 RXRBP28702 533 aa17.15■□□□□ 0.34
ITM2A-206ENST00000482194 ZRANB1Q9UGI0 708 aa17.15■□□□□ 0.34
ITM2A-206ENST00000482194 ABCC1P33527 1531 aa17.15■□□□□ 0.34
ITM2A-206ENST00000482194 TNRQ92752 1358 aa17.14■□□□□ 0.33
ITM2A-206ENST00000482194 MEX3CQ5U5Q3 659 aaKnown RBP17.13■□□□□ 0.33
ITM2A-206ENST00000482194 CDC42BPBQ9Y5S2 1711 aa17.13■□□□□ 0.33
ITM2A-206ENST00000482194 ATP1B4Q9UN42 357 aaPredicted RBP17.12■□□□□ 0.33
ITM2A-206ENST00000482194 JCADQ9P266 1359 aa17.11■□□□□ 0.33
ITM2A-206ENST00000482194 ROBO1Q9Y6N7 1651 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms