RNA–Protein interactions for RNA: ENST00000482098.1

LINC00888-203, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 794 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-203ENST00000482098 BRPF1P55201 1214 aaPredicted RBP13.04□□□□□ -0.32
LINC00888-203ENST00000482098 ILDR1Q86SU0 546 aaPredicted RBP13.02□□□□□ -0.33
LINC00888-203ENST00000482098 SPDYE1Q8NFV5 336 aaPredicted RBP13.01□□□□□ -0.33
LINC00888-203ENST00000482098 CUX1P39880 1505 aa12.98□□□□□ -0.33
LINC00888-203ENST00000482098 NEUROD2Q15784 382 aa12.97□□□□□ -0.33
LINC00888-203ENST00000482098 NUP160Q12769 1436 aa12.96□□□□□ -0.33
LINC00888-203ENST00000482098 PYGBP11216 843 aa12.96□□□□□ -0.33
LINC00888-203ENST00000482098 RASEFQ8IZ41 740 aa12.96□□□□□ -0.33
LINC00888-203ENST00000482098 ABCA10Q8WWZ4 1543 aa12.96□□□□□ -0.33
LINC00888-203ENST00000482098 CREBZFQ9NS37 354 aa12.95□□□□□ -0.34
LINC00888-203ENST00000482098 GRIN2AQ12879 1464 aa12.95□□□□□ -0.34
LINC00888-203ENST00000482098 KDM4FA0A1W2PPD8 638 aa12.94□□□□□ -0.34
LINC00888-203ENST00000482098 CADPS2Q86UW7 1296 aa12.94□□□□□ -0.34
LINC00888-203ENST00000482098 CEP170Q5SW79 1584 aa12.94□□□□□ -0.34
LINC00888-203ENST00000482098 ERCC6L2Q5T890 1561 aa12.94□□□□□ -0.34
LINC00888-203ENST00000482098 PRR29P0C7W0 189 aa12.93□□□□□ -0.34
LINC00888-203ENST00000482098 MNX1P50219 401 aaPredicted RBP12.93□□□□□ -0.34
LINC00888-203ENST00000482098 ABCC10Q5T3U5 1492 aa12.92□□□□□ -0.34
LINC00888-203ENST00000482098 ZC3H15Q8WU90 426 aaKnown RBP12.92□□□□□ -0.34
LINC00888-203ENST00000482098 ARHGEF1Q92888 912 aaKnown RBP12.92□□□□□ -0.34
LINC00888-203ENST00000482098 FAM69CQ0P6D2 419 aa12.91□□□□□ -0.34
LINC00888-203ENST00000482098 PBRM1Q86U86 1689 aa12.91□□□□□ -0.34
LINC00888-203ENST00000482098 SUPT5HO00267 1087 aaKnown RBP12.9□□□□□ -0.34
LINC00888-203ENST00000482098 SHROOM2Q13796 1616 aa12.9□□□□□ -0.34
LINC00888-203ENST00000482098 ABCA5Q8WWZ7 1642 aa12.9□□□□□ -0.34
LINC00888-203ENST00000482098 KIF13AQ9H1H9 1805 aa12.9□□□□□ -0.34
LINC00888-203ENST00000482098 CLEC11AQ9Y240 323 aa12.89□□□□□ -0.35
LINC00888-203ENST00000482098 FHAD1B1AJZ9 1412 aa12.87□□□□□ -0.35
LINC00888-203ENST00000482098 ZNF467Q7Z7K2 595 aaPredicted RBP12.86□□□□□ -0.35
LINC00888-203ENST00000482098 MAPKBP1O60336 1514 aa12.86□□□□□ -0.35
LINC00888-203ENST00000482098 JPH4Q96JJ6 628 aa12.85□□□□□ -0.35
LINC00888-203ENST00000482098 SLC24A3Q9HC58 644 aa12.85□□□□□ -0.35
LINC00888-203ENST00000482098 PRG4Q92954 1404 aaPredicted RBP12.84□□□□□ -0.35
LINC00888-203ENST00000482098 ADAMTS12P58397 1594 aa12.84□□□□□ -0.35
LINC00888-203ENST00000482098 WRNQ14191 1432 aaPredicted RBP eCLIP12.83□□□□□ -0.36
LINC00888-203ENST00000482098 E2F4Q16254 413 aa12.82□□□□□ -0.36
LINC00888-203ENST00000482098 PDAP1Q13442 181 aaKnown RBP12.8□□□□□ -0.36
LINC00888-203ENST00000482098 DIP2BQ9P265 1576 aa12.8□□□□□ -0.36
LINC00888-203ENST00000482098 KDM6BO15054 1643 aa12.8□□□□□ -0.36
LINC00888-203ENST00000482098 TESPA1A2RU30 521 aaPredicted RBP12.79□□□□□ -0.36
LINC00888-203ENST00000482098 AKT1S1Q96B36 256 aa12.79□□□□□ -0.36
LINC00888-203ENST00000482098 ERICH3Q5RHP9 1530 aa12.78□□□□□ -0.36
LINC00888-203ENST00000482098 SMYD5Q6GMV2 418 aa12.78□□□□□ -0.36
LINC00888-203ENST00000482098 SEMA3EO15041 775 aa12.76□□□□□ -0.37
LINC00888-203ENST00000482098 RBM42Q9BTD8 480 aaKnown RBP12.74□□□□□ -0.37
LINC00888-203ENST00000482098 MFRPQ9BY79 579 aa12.73□□□□□ -0.37
LINC00888-203ENST00000482098 ZMYND10O75800 440 aa12.72□□□□□ -0.37
LINC00888-203ENST00000482098 ADCY10Q96PN6 1610 aa12.7□□□□□ -0.38
LINC00888-203ENST00000482098 ADGRL1O94910 1474 aa12.68□□□□□ -0.38
LINC00888-203ENST00000482098 PODXL2Q9NZ53 605 aa12.68□□□□□ -0.38
LINC00888-203ENST00000482098 PSEN1P49768 467 aa12.66□□□□□ -0.38
LINC00888-203ENST00000482098 RUSC2Q8N2Y8 1516 aa12.66□□□□□ -0.38
LINC00888-203ENST00000482098 TOP2BQ02880 1626 aa12.66□□□□□ -0.38
LINC00888-203ENST00000482098 FBXO41Q8TF61 875 aa12.65□□□□□ -0.38
LINC00888-203ENST00000482098 TSPYL2Q9H2G4 693 aaPredicted RBP12.65□□□□□ -0.38
LINC00888-203ENST00000482098 KIAA0586Q9BVV6 1533 aa12.64□□□□□ -0.39
LINC00888-203ENST00000482098 NLRP6P59044 892 aa12.64□□□□□ -0.39
LINC00888-203ENST00000482098 BARGINQ6ZT62 677 aa12.64□□□□□ -0.39
LINC00888-203ENST00000482098 REM2Q8IYK8 340 aaPredicted RBP12.64□□□□□ -0.39
LINC00888-203ENST00000482098 PCDHB8Q9UN66 801 aa12.64□□□□□ -0.39
LINC00888-203ENST00000482098 PCDHB13Q9Y5F0 798 aa12.64□□□□□ -0.39
LINC00888-203ENST00000482098 PLB1Q6P1J6 1458 aa12.64□□□□□ -0.39
LINC00888-203ENST00000482098 HECW2Q9P2P5 1572 aa12.64□□□□□ -0.39
LINC00888-203ENST00000482098 GLI2P10070 1586 aa12.63□□□□□ -0.39
LINC00888-203ENST00000482098 BIVM-ERCC5R4GMW8 1640 aa12.62□□□□□ -0.39
LINC00888-203ENST00000482098 PPP1R37O75864 691 aa12.62□□□□□ -0.39
LINC00888-203ENST00000482098 PTPRGP23470 1445 aa12.62□□□□□ -0.39
LINC00888-203ENST00000482098 RANGAP1P46060 587 aaPredicted RBP12.61□□□□□ -0.39
LINC00888-203ENST00000482098 AK7Q96M32 723 aa12.61□□□□□ -0.39
LINC00888-203ENST00000482098 TSPOAP1O95153 1857 aa12.6□□□□□ -0.39
LINC00888-203ENST00000482098 ZMYND15Q9H091 742 aa12.6□□□□□ -0.39
LINC00888-203ENST00000482098 ABCC2Q92887 1545 aa12.6□□□□□ -0.39
LINC00888-203ENST00000482098 ZNF579Q8NAF0 562 aaKnown RBP12.59□□□□□ -0.39
LINC00888-203ENST00000482098 SOX12O15370 315 aa12.58□□□□□ -0.4
LINC00888-203ENST00000482098 ASXL2Q76L83 1435 aa12.58□□□□□ -0.4
LINC00888-203ENST00000482098 RSPH6AQ9H0K4 717 aa12.58□□□□□ -0.4
LINC00888-203ENST00000482098 PDE4AP27815 886 aa12.57□□□□□ -0.4
LINC00888-203ENST00000482098 COL17A1Q9UMD9 1497 aaPredicted RBP12.57□□□□□ -0.4
LINC00888-203ENST00000482098 KRI1Q8N9T8 703 aaKnown RBP12.56□□□□□ -0.4
LINC00888-203ENST00000482098 LARP6Q9BRS8 491 aaKnown RBP12.56□□□□□ -0.4
LINC00888-203ENST00000482098 TEX14Q8IWB6 1497 aa12.56□□□□□ -0.4
LINC00888-203ENST00000482098 TNIKQ9UKE5 1360 aa12.56□□□□□ -0.4
LINC00888-203ENST00000482098 UHRF1BP1LA0JNW5 1464 aa12.55□□□□□ -0.4
LINC00888-203ENST00000482098 FBXO22Q8NEZ5 403 aa12.55□□□□□ -0.4
LINC00888-203ENST00000482098 CARMIL2Q6F5E8 1435 aa12.54□□□□□ -0.4
LINC00888-203ENST00000482098 UBTFP17480 764 aaKnown RBP12.54□□□□□ -0.4
LINC00888-203ENST00000482098 ARIH1Q9Y4X5 557 aaPredicted RBP12.54□□□□□ -0.4
LINC00888-203ENST00000482098 PPRC1Q5VV67 1664 aaKnown RBP12.54□□□□□ -0.4
LINC00888-203ENST00000482098 EFCAB3Q8N7B9 438 aa12.53□□□□□ -0.4
LINC00888-203ENST00000482098 IL27Q8NEV9 243 aa12.53□□□□□ -0.4
LINC00888-203ENST00000482098 IGF1RP08069 1367 aa12.53□□□□□ -0.4
LINC00888-203ENST00000482098 GPBP1L1Q9HC44 474 aaPredicted RBP12.51□□□□□ -0.41
LINC00888-203ENST00000482098 PHF8Q9UPP1 1060 aa12.51□□□□□ -0.41
LINC00888-203ENST00000482098 NCKAP5LQ9HCH0 1330 aa12.51□□□□□ -0.41
LINC00888-203ENST00000482098 EPRSP07814 1512 aaKnown RBP12.51□□□□□ -0.41
LINC00888-203ENST00000482098 MFSD10Q14728 455 aa12.5□□□□□ -0.41
LINC00888-203ENST00000482098 GPIHBP1Q8IV16 184 aa12.5□□□□□ -0.41
LINC00888-203ENST00000482098 UACAQ9BZF9 1416 aa12.5□□□□□ -0.41
LINC00888-203ENST00000482098 CABP2Q9NPB3 220 aa12.49□□□□□ -0.41
LINC00888-203ENST00000482098 KDM5BQ9UGL1 1544 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms