RNA–Protein interactions for RNA: ENST00000482028.5

PABPC4-213, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-213ENST00000482028 ATP10BO94823 1461 aa18.92■□□□□ 0.62
PABPC4-213ENST00000482028 NAIPQ13075 1403 aa18.91■□□□□ 0.62
PABPC4-213ENST00000482028 ADGBQ8N7X0 1667 aa18.89■□□□□ 0.61
PABPC4-213ENST00000482028 DAPK1P53355 1430 aa18.88■□□□□ 0.61
PABPC4-213ENST00000482028 SHANK2Q9UPX8 1470 aa18.88■□□□□ 0.61
PABPC4-213ENST00000482028 GPATCH8Q9UKJ3 1502 aaKnown RBP18.88■□□□□ 0.61
PABPC4-213ENST00000482028 MAPKBP1O60336 1514 aa18.87■□□□□ 0.61
PABPC4-213ENST00000482028 RSPH4AQ5TD94 716 aa18.87■□□□□ 0.61
PABPC4-213ENST00000482028 ABCC10Q5T3U5 1492 aa18.86■□□□□ 0.61
PABPC4-213ENST00000482028 ZNF316A6NFI3 1004 aaPredicted RBP18.86■□□□□ 0.61
PABPC4-213ENST00000482028 CROCC2H7BZ55 1655 aa18.85■□□□□ 0.61
PABPC4-213ENST00000482028 ADGRL2O95490 1459 aa18.85■□□□□ 0.61
PABPC4-213ENST00000482028 CDC42BPAQ5VT25 1732 aa18.85■□□□□ 0.61
PABPC4-213ENST00000482028 CAMSAP2Q08AD1 1489 aa18.84■□□□□ 0.61
PABPC4-213ENST00000482028 CFDP1Q9UEE9 299 aaPredicted RBP18.84■□□□□ 0.61
PABPC4-213ENST00000482028 PTPRKQ15262 1439 aa18.83■□□□□ 0.61
PABPC4-213ENST00000482028 ARHGEF5Q12774 1597 aa18.83■□□□□ 0.6
PABPC4-213ENST00000482028 PLEKHH2Q8IVE3 1493 aa18.81■□□□□ 0.6
PABPC4-213ENST00000482028 PREX2Q70Z35 1606 aa18.81■□□□□ 0.6
PABPC4-213ENST00000482028 KDM5BQ9UGL1 1544 aa18.79■□□□□ 0.6
PABPC4-213ENST00000482028 ABCC5O15440 1437 aa18.79■□□□□ 0.6
PABPC4-213ENST00000482028 ARAP3Q8WWN8 1544 aa18.77■□□□□ 0.6
PABPC4-213ENST00000482028 ANKRD30AQ9BXX3 1397 aa18.76■□□□□ 0.59
PABPC4-213ENST00000482028 MYO5CQ9NQX4 1742 aa18.75■□□□□ 0.59
PABPC4-213ENST00000482028 ZCCHC11Q5TAX3 1644 aaKnown RBP18.72■□□□□ 0.59
PABPC4-213ENST00000482028 NCOA1Q15788 1441 aa18.72■□□□□ 0.59
PABPC4-213ENST00000482028 KIAA1107Q9UPP5 1409 aa18.72■□□□□ 0.59
PABPC4-213ENST00000482028 MAST1Q9Y2H9 1570 aa18.71■□□□□ 0.59
PABPC4-213ENST00000482028 DIEXFQ68CQ4 756 aaKnown RBP18.7■□□□□ 0.58
PABPC4-213ENST00000482028 CDC42BPBQ9Y5S2 1711 aa18.69■□□□□ 0.58
PABPC4-213ENST00000482028 ARID3CA6NKF2 412 aa18.69■□□□□ 0.58
PABPC4-213ENST00000482028 TSPY4P0CV99 314 aa18.68■□□□□ 0.58
PABPC4-213ENST00000482028 TSPY10P0CW01 314 aa18.68■□□□□ 0.58
PABPC4-213ENST00000482028 CCDC141Q6ZP82 1450 aa18.68■□□□□ 0.58
PABPC4-213ENST00000482028 ERCC6L2Q5T890 1561 aa18.67■□□□□ 0.58
PABPC4-213ENST00000482028 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.66■□□□□ 0.58
PABPC4-213ENST00000482028 TONSLQ96HA7 1378 aa18.66■□□□□ 0.58
PABPC4-213ENST00000482028 C9orf84Q5VXU9 1444 aa18.65■□□□□ 0.58
PABPC4-213ENST00000482028 RRP7BPQ9NSQ0 103 aa18.63■□□□□ 0.57
PABPC4-213ENST00000482028 ARHGAP5Q13017 1502 aa18.63■□□□□ 0.57
PABPC4-213ENST00000482028 KDM5DQ9BY66 1539 aa18.63■□□□□ 0.57
PABPC4-213ENST00000482028 SAMD9LQ8IVG5 1584 aa18.63■□□□□ 0.57
PABPC4-213ENST00000482028 PLCH2O75038 1416 aa18.62■□□□□ 0.57
PABPC4-213ENST00000482028 MBD5Q9P267 1494 aa18.62■□□□□ 0.57
PABPC4-213ENST00000482028 PLXNC1O60486 1568 aa18.62■□□□□ 0.57
PABPC4-213ENST00000482028 TTC37Q6PGP7 1564 aa18.61■□□□□ 0.57
PABPC4-213ENST00000482028 CHIC2Q9UKJ5 165 aa18.61■□□□□ 0.57
PABPC4-213ENST00000482028 ANKRD50Q9ULJ7 1429 aa18.6■□□□□ 0.57
PABPC4-213ENST00000482028 MPHOSPH9Q99550 1183 aa18.59■□□□□ 0.57
PABPC4-213ENST00000482028 WDR7Q9Y4E6 1490 aa18.58■□□□□ 0.57
PABPC4-213ENST00000482028 ZNF644Q9H582 1327 aaPredicted RBP18.58■□□□□ 0.57
PABPC4-213ENST00000482028 TRIM52Q96A61 297 aa18.58■□□□□ 0.56
PABPC4-213ENST00000482028 KDM4FA0A1W2PPD8 638 aa18.57■□□□□ 0.56
PABPC4-213ENST00000482028 PPP1R15AO75807 674 aaPredicted RBP18.57■□□□□ 0.56
PABPC4-213ENST00000482028 EFCAB2Q5VUJ9 269 aa18.57■□□□□ 0.56
PABPC4-213ENST00000482028 ZNF777Q9ULD5 760 aaPredicted RBP18.56■□□□□ 0.56
PABPC4-213ENST00000482028 KDM6BO15054 1643 aa18.56■□□□□ 0.56
PABPC4-213ENST00000482028 ABCA9Q8IUA7 1624 aa18.56■□□□□ 0.56
PABPC4-213ENST00000482028 RPRD2Q5VT52 1461 aaKnown RBP18.53■□□□□ 0.56
PABPC4-213ENST00000482028 RTEL1-TNFRSF6BF6WH68 1400 aa18.53■□□□□ 0.56
PABPC4-213ENST00000482028 CFAP74Q9C0B2 1584 aa18.53■□□□□ 0.56
PABPC4-213ENST00000482028 ABCC1P33527 1531 aa18.52■□□□□ 0.56
PABPC4-213ENST00000482028 KIF15Q9NS87 1388 aa18.52■□□□□ 0.55
PABPC4-213ENST00000482028 SYCP2Q9BX26 1530 aa18.51■□□□□ 0.55
PABPC4-213ENST00000482028 DUOX2Q9NRD8 1548 aa18.51■□□□□ 0.55
PABPC4-213ENST00000482028 ANKRD30BQ9BXX2 1392 aa18.51■□□□□ 0.55
PABPC4-213ENST00000482028 NPM1P06748 294 aaKnown RBP eCLIP18.5■□□□□ 0.55
PABPC4-213ENST00000482028 NEUROD1Q13562 356 aa18.5■□□□□ 0.55
PABPC4-213ENST00000482028 ERBINQ96RT1 1412 aa18.49■□□□□ 0.55
PABPC4-213ENST00000482028 SIN3AQ96ST3 1273 aa18.49■□□□□ 0.55
PABPC4-213ENST00000482028 SLC4A1APQ9BWU0 796 aaKnown RBP18.49■□□□□ 0.55
PABPC4-213ENST00000482028 DENND4BO75064 1496 aaPredicted RBP18.49■□□□□ 0.55
PABPC4-213ENST00000482028 PZPP20742 1482 aa18.49■□□□□ 0.55
PABPC4-213ENST00000482028 KIF13AQ9H1H9 1805 aa18.49■□□□□ 0.55
PABPC4-213ENST00000482028 UNC13BO14795 1591 aa18.48■□□□□ 0.55
PABPC4-213ENST00000482028 HNRNPMP52272 730 aaKnown RBP eCLIP18.42■□□□□ 0.54
PABPC4-213ENST00000482028 ASXL2Q76L83 1435 aa18.41■□□□□ 0.54
PABPC4-213ENST00000482028 MAGI2Q86UL8 1455 aa18.41■□□□□ 0.54
PABPC4-213ENST00000482028 ARHGEF12Q9NZN5 1544 aa18.41■□□□□ 0.54
PABPC4-213ENST00000482028 IQGAP3Q86VI3 1631 aa18.41■□□□□ 0.54
PABPC4-213ENST00000482028 NUP155O75694 1391 aa18.4■□□□□ 0.54
PABPC4-213ENST00000482028 FANCAO15360 1455 aa18.39■□□□□ 0.54
PABPC4-213ENST00000482028 EIF2AK4Q9P2K8 1649 aaKnown RBP18.38■□□□□ 0.53
PABPC4-213ENST00000482028 CENPBP07199 599 aaPredicted RBP18.38■□□□□ 0.53
PABPC4-213ENST00000482028 KCNH8Q96L42 1107 aa18.38■□□□□ 0.53
PABPC4-213ENST00000482028 TEX14Q8IWB6 1497 aa18.37■□□□□ 0.53
PABPC4-213ENST00000482028 FAM135AQ9P2D6 1515 aa18.37■□□□□ 0.53
PABPC4-213ENST00000482028 INO80Q9ULG1 1556 aaPredicted RBP18.35■□□□□ 0.53
PABPC4-213ENST00000482028 ATP10AO60312 1499 aa18.35■□□□□ 0.53
PABPC4-213ENST00000482028 ZFYVE16Q7Z3T8 1539 aa18.34■□□□□ 0.53
PABPC4-213ENST00000482028 ZNF518AQ6AHZ1 1483 aa18.33■□□□□ 0.52
PABPC4-213ENST00000482028 SPAG9O60271 1321 aaKnown RBP18.32■□□□□ 0.52
PABPC4-213ENST00000482028 PKD2Q13563 968 aa18.32■□□□□ 0.52
PABPC4-213ENST00000482028 HECW2Q9P2P5 1572 aa18.32■□□□□ 0.52
PABPC4-213ENST00000482028 ADGRL1O94910 1474 aa18.32■□□□□ 0.52
PABPC4-213ENST00000482028 DEPDC5O75140 1603 aa18.31■□□□□ 0.52
PABPC4-213ENST00000482028 ATP7AQ04656 1500 aa18.31■□□□□ 0.52
PABPC4-213ENST00000482028 NEO1Q92859 1461 aa18.31■□□□□ 0.52
PABPC4-213ENST00000482028 FBXO41Q8TF61 875 aa18.29■□□□□ 0.52
PABPC4-213ENST00000482028 STAC3Q96MF2 364 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms